Os06g0705300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein 1589, plant family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0705300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein 1589, plant family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21 | 0.215 | 12.9 | 0.0376 | 0.795 | 0.643 | 0.34 | -4.59 | 0.271 | 23 | 26.31 | 3635 | -- | -- |
| 23.07 | 0.224 | 12.8 | 0.832 | 0.812 | 0.306 | 0.162 | -- | 0.333 | 23 | 18.28 | 8116 | -- | -- |
| 21.45 | 0.216 | 12.9 | 0.0474 | 0.799 | 0.647 | -- | -4.6 | 0.282 | 22.9 | 26.54 | 3555 | -- | -- |
| 23.22 | 0.224 | 12.8 | 0.851 | 0.805 | 0.311 | -- | -- | 0.341 | 22.9 | 17.3 | 8053 | -- | -- |
| 56.54 | 0.35 | 12.9 | -0.039 | -- | 0.808 | -- | -3.6 | 0.153 | -- | 24.4 | 2297 | -- | -- |
| 25.17 | 0.235 | 12.8 | 1.04 | 0.831 | -- | 0.261 | -- | 0.446 | 22.9 | -- | -- | -- | -- |
| 25.45 | 0.236 | 12.8 | 1.03 | 0.83 | -- | -- | -- | 0.446 | 22.9 | -- | -- | -- | -- |
| 62.19 | 0.369 | 12.8 | 1.12 | -- | -0.491 | -- | -- | 0.499 | -- | 24.4 | 2297 | -- | -- |
| 28.44 | 0.248 | 12.9 | -- | 0.809 | 0.814 | -- | -- | 0.111 | 22.8 | 10.5 | 47048 | -- | -- |
| 68.22 | 0.386 | 12.8 | 1.05 | -- | -- | -- | -- | 0.451 | -- | -- | -- | -- | -- |
| 53.46 | 0.342 | 12.8 | -- | 0.839 | -- | -- | -- | 0.331 | 23 | -- | -- | -- | -- |
| 69.23 | 0.388 | 12.9 | -- | -- | 0.845 | -- | -- | 0.073 | -- | 9.299 | 47016 | -- | -- |
| 97.22 | 0.46 | 12.8 | -- | -- | -- | -- | -- | 0.335 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.74 | radiation | 1 | 720 | < th | dose dependent | rect. | 16 | 8 |
| 3 | 19.84 | humidity | 70 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 5 | 19.89 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 6 | 19.92 | temperature | 25 | 720 | < th | dose independent | rect. | 16 | 7 |
| 12 | 19.93 | temperature | 25 | 720 | < th | dose independent | rect. | 15 | 10 |
| 13 | 19.93 | temperature | 25 | 720 | < th | dose independent | rect. | 15 | 18 |
| 24 | 19.99 | temperature | 25 | 720 | < th | dose independent | sin | 15 | NA |
| 29 | 20.00 | humidity | 60 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 35 | 20.03 | humidity | 70 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 45 | 20.07 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 2 |
| 49 | 20.08 | radiation | 1 | 720 | < th | dose independent | rect. | 16 | 8 |
| 56 | 20.11 | humidity | 60 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 63 | 20.12 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 121 | 20.23 | temperature | 25 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 126 | 20.24 | radiation | 1 | 720 | < th | dose dependent | sin | 15 | NA |
| 133 | 20.26 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 134 | 20.27 | humidity | 60 | 43200 | > th | dose independent | sin | 7 | NA |
| 137 | 20.27 | humidity | 60 | 43200 | < th | dose independent | rect. | 3 | 10 |
| 147 | 20.29 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 155 | 20.30 | humidity | 60 | 43200 | < th | dose independent | sin | 6 | NA |
| 159 | 20.30 | humidity | 70 | 43200 | < th | dose dependent | sin | 8 | NA |
| 173 | 20.32 | radiation | 20 | 43200 | > th | dose independent | rect. | 16 | 17 |
| 177 | 20.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 9 |
| 199 | 20.38 | radiation | 20 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 200 | 20.38 | radiation | 20 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 201 | 20.38 | radiation | 30 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 241 | 20.40 | radiation | 1 | 720 | > th | dose independent | rect. | 8 | 11 |
| 270 | 20.42 | radiation | 20 | 43200 | > th | dose independent | sin | 11 | NA |
| 275 | 20.42 | radiation | 10 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 277 | 20.42 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 8 |
| 311 | 20.44 | radiation | 10 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 312 | 20.44 | wind | 1 | 43200 | < th | dose dependent | rect. | 22 | 4 |
| 318 | 20.45 | humidity | 70 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 346 | 20.46 | radiation | 40 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 347 | 20.46 | radiation | 30 | 43200 | < th | dose dependent | rect. | 17 | 17 |
| 391 | 20.48 | radiation | 10 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 392 | 20.48 | radiation | 40 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 429 | 20.49 | radiation | 30 | 43200 | < th | dose dependent | sin | 10 | NA |
| 433 | 20.49 | radiation | 10 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 442 | 20.49 | radiation | 10 | 43200 | < th | dose dependent | rect. | 19 | 14 |
| 495 | 20.50 | radiation | 40 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 499 | 20.50 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 6 |
| 520 | 20.50 | radiation | 1 | 43200 | > th | dose dependent | rect. | 17 | 17 |
| 544 | 20.51 | radiation | 1 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 733 | 20.54 | radiation | 10 | 43200 | < th | dose independent | rect. | 18 | 22 |
| 734 | 20.54 | radiation | 1 | 43200 | > th | dose dependent | sin | 10 | NA |
| 799 | 20.55 | radiation | 10 | 43200 | < th | dose independent | rect. | 5 | 11 |
| 929 | 20.57 | radiation | 30 | 43200 | < th | dose independent | sin | 10 | NA |
| 965 | 20.57 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 22 |
| 991 | 20.57 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 8 |