Os02g0137100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein 1589, plant family protein.
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Os02g0137100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein 1589, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.23 | 0.374 | 8.91 | 1.2 | 0.628 | 0.57 | 0.472 | -1.13 | 0.0787 | 20.2 | 43.16 | 10 | -- | -- |
| 66.05 | 0.379 | 8.92 | 1.2 | 0.662 | 0.602 | -0.274 | -- | 0.0757 | 20.7 | 60 | 9 | -- | -- |
| 63.68 | 0.372 | 8.91 | 1.19 | 0.644 | 0.572 | -- | -0.915 | 0.0899 | 20.3 | 48.52 | 14 | -- | -- |
| 66.27 | 0.379 | 8.91 | 1.22 | 0.667 | 0.649 | -- | -- | 0.0915 | 20.3 | 73.9 | 20 | -- | -- |
| 78.11 | 0.412 | 8.9 | 1.19 | -- | 0.691 | -- | -0.728 | 0.0707 | -- | 19.01 | 8 | -- | -- |
| 71.01 | 0.395 | 8.92 | 1.19 | 0.902 | -- | -0.43 | -- | 0.0757 | 21.8 | -- | -- | -- | -- |
| 71.7 | 0.397 | 8.92 | 1.21 | 0.906 | -- | -- | -- | 0.077 | 21.7 | -- | -- | -- | -- |
| 80.22 | 0.417 | 8.9 | 1.2 | -- | 0.657 | -- | -- | 0.0781 | -- | 11.5 | 6 | -- | -- |
| 104.76 | 0.477 | 8.94 | -- | 0.653 | 0.688 | -- | -- | -0.0374 | 20.4 | 70.11 | 49 | -- | -- |
| 120.56 | 0.513 | 8.9 | 1.22 | -- | -- | -- | -- | 0.0759 | -- | -- | -- | -- | -- |
| 110.17 | 0.491 | 8.95 | -- | 0.91 | -- | -- | -- | -0.0575 | 21.8 | -- | -- | -- | -- |
| 117.67 | 0.505 | 8.92 | -- | -- | 0.661 | -- | -- | -0.0505 | -- | 10 | 6 | -- | -- |
| 159.6 | 0.59 | 8.93 | -- | -- | -- | -- | -- | -0.0591 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.10 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 2 | 60.31 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 3 | 60.53 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 9 |
| 4 | 60.61 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 5 | 60.73 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 10 |
| 6 | 60.82 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 3 |
| 7 | 60.82 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 9 | 60.85 | radiation | 30.0 | 30 | < th | dose independent | rect. | 14 | 19 |
| 12 | 60.96 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 18 | 61.11 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 23 | 61.21 | radiation | 30.0 | 30 | < th | dose independent | rect. | 12 | 21 |
| 27 | 61.29 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 35 | 61.47 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 7 |
| 39 | 61.54 | radiation | 20.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 44 | 61.60 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 10 |
| 48 | 61.65 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 7 |
| 52 | 61.69 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 9 |
| 61 | 61.83 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 23 | 9 |
| 73 | 61.88 | radiation | 30.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 85 | 61.95 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 10 | 23 |
| 86 | 61.96 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 100 | 62.08 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 1 | 8 |
| 101 | 62.09 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 20 | 19 |
| 117 | 62.16 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 12 | 18 |
| 135 | 62.25 | temperature | 20.0 | 30 | > th | dose independent | rect. | 1 | 8 |
| 138 | 62.29 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 18 | 19 |
| 154 | 62.44 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 8 |
| 159 | 62.45 | radiation | 20.0 | 30 | < th | dose independent | rect. | 10 | 23 |
| 166 | 62.48 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 169 | 62.49 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 17 |
| 170 | 62.49 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 8 | 6 |
| 176 | 62.53 | radiation | 30.0 | 30 | < th | dose independent | rect. | 1 | 8 |
| 177 | 62.53 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 15 |
| 179 | 62.54 | humidity | 70.0 | 30 | > th | dose independent | rect. | 1 | 8 |
| 181 | 62.56 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 186 | 62.57 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 15 |
| 187 | 62.57 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 15 |
| 189 | 62.57 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 15 | 18 |
| 190 | 62.58 | radiation | 10.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 193 | 62.59 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 2 | 8 |
| 199 | 62.62 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 204 | 62.64 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 16 | 17 |
| 211 | 62.66 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 16 | NA |
| 217 | 62.68 | temperature | 20.0 | 720 | < th | dose independent | rect. | 1 | 3 |
| 219 | 62.69 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 221 | 62.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 222 | 62.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 223 | 62.69 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 225 | 62.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 226 | 62.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 15 |
| 230 | 62.70 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 233 | 62.71 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 6 |
| 235 | 62.71 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 238 | 62.71 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 6 |
| 239 | 62.71 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 6 |
| 242 | 62.71 | temperature | 10.0 | 30 | > th | dose independent | rect. | 15 | 18 |
| 243 | 62.71 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 249 | 62.72 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 6 |
| 250 | 62.72 | temperature | 20.0 | 720 | < th | dose independent | rect. | 23 | 8 |
| 251 | 62.72 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 6 |
| 253 | 62.72 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 9 | 7 |
| 287 | 62.77 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 15 | 18 |
| 290 | 62.78 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 301 | 62.80 | temperature | 25.0 | 270 | < th | dose independent | rect. | 7 | 4 |
| 302 | 62.80 | wind | 9.0 | 30 | < th | dose independent | rect. | 15 | 18 |
| 306 | 62.81 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 313 | 62.82 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 320 | 62.84 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 15 |
| 322 | 62.84 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 324 | 62.85 | humidity | 80.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 330 | 62.86 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 15 | 18 |
| 336 | 62.86 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 15 | 18 |
| 343 | 62.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 9 |
| 345 | 62.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 354 | 62.90 | radiation | 20.0 | 30 | < th | dose independent | rect. | 23 | 21 |
| 378 | 62.94 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 16 |
| 384 | 62.96 | humidity | 50.0 | 30 | > th | dose independent | rect. | 15 | 18 |
| 388 | 62.97 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 21 | 14 |
| 393 | 62.98 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 6 |
| 402 | 62.99 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 13 | 20 |
| 415 | 63.01 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 14 |
| 431 | 63.02 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 10 | NA |
| 434 | 63.03 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 6 |
| 442 | 63.04 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 462 | 63.08 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 15 |
| 478 | 63.10 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 23 | 11 |
| 483 | 63.10 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 485 | 63.11 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 2 | 7 |
| 486 | 63.11 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 493 | 63.12 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 497 | 63.12 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 498 | 63.13 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 500 | 63.13 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 6 |
| 504 | 63.13 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 23 | 11 |
| 507 | 63.13 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 1 | 8 |
| 512 | 63.14 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 533 | 63.15 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 9 | 6 |
| 538 | 63.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 1 |
| 541 | 63.16 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 19 |
| 542 | 63.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 546 | 63.16 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 15 | 18 |
| 548 | 63.16 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 550 | 63.17 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 560 | 63.17 | radiation | 20.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 566 | 63.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 567 | 63.18 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 568 | 63.18 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 569 | 63.18 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 570 | 63.18 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 576 | 63.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 577 | 63.18 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 580 | 63.18 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 581 | 63.19 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 582 | 63.19 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 588 | 63.20 | temperature | 20.0 | 720 | > th | dose independent | sin | 11 | NA |
| 594 | 63.20 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 15 |
| 597 | 63.20 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 7 | 9 |
| 602 | 63.21 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 604 | 63.21 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 615 | 63.21 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 5 | 11 |
| 638 | 63.23 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 6 |
| 650 | 63.24 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 11 | 14 |
| 662 | 63.25 | radiation | 20.0 | 30 | < th | dose independent | rect. | 19 | 23 |
| 663 | 63.25 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 672 | 63.26 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 692 | 63.29 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 696 | 63.29 | radiation | 40.0 | 30 | < th | dose dependent | sin | 4 | NA |
| 697 | 63.29 | radiation | 40.0 | 10 | < th | dose dependent | no | NA | NA |
| 705 | 63.30 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 7 |
| 721 | 63.32 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 23 |
| 727 | 63.32 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 728 | 63.33 | wind | 1.0 | 90 | > th | dose independent | rect. | 9 | 16 |
| 730 | 63.33 | radiation | 20.0 | 30 | < th | dose independent | rect. | 1 | 19 |
| 732 | 63.33 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 734 | 63.33 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 23 | 17 |
| 757 | 63.35 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 759 | 63.35 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 761 | 63.35 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 821 | 63.35 | radiation | 40.0 | 90 | < th | dose independent | rect. | 23 | 21 |
| 822 | 63.35 | humidity | 60.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 823 | 63.35 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 825 | 63.35 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 827 | 63.35 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 884 | 63.36 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 888 | 63.36 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 11 | 20 |
| 895 | 63.37 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 20 |
| 942 | 63.41 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 24 | 15 |
| 952 | 63.42 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 957 | 63.42 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 981 | 63.43 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 984 | 63.44 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 6 |
| 991 | 63.44 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 992 | 63.44 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 6 |