BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0137100 Os02g0137100|AK073353
(329 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G10250.1 | chr3:3168371-3170418 REVERSE LENGTH=325 286 1e-77
AT5G04090.2 | chr5:1105672-1107629 REVERSE LENGTH=306 233 9e-62
AT3G61700.2 | chr3:22836414-22838803 FORWARD LENGTH=365 166 1e-41
AT2G46420.1 | chr2:19054891-19056830 FORWARD LENGTH=364 157 5e-39
AT2G29605.1 | chr2:12657909-12660087 REVERSE LENGTH=402 66 3e-11
AT3G55240.1 | chr3:20473876-20474705 REVERSE LENGTH=96 65 6e-11
AT3G28990.1 | chr3:11002351-11003046 REVERSE LENGTH=89 59 3e-09
AT5G02580.1 | chr5:579965-580454 FORWARD LENGTH=92 56 2e-08
AT1G49700.1 | chr1:18388792-18390496 REVERSE LENGTH=280 55 7e-08
AT3G45800.1 | chr3:16829482-16832207 REVERSE LENGTH=591 51 8e-07
AT2G11623.1 | chr2:4660870-4661415 REVERSE LENGTH=111 50 2e-06
>AT3G10250.1 | chr3:3168371-3170418 REVERSE LENGTH=325
Length = 324
Score = 286 bits (731), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/327 (49%), Positives = 212/327 (64%), Gaps = 7/327 (2%)
Query: 7 MSGGEDVRKVSRQDIQLVQNLIERCLQLYMNQKEVVETLSFQAKIEPSFTELVWQKLEEE 66
MS G VR+VSRQDIQLVQNLIERCLQLYMNQKEVV+TL QAKIEP FTELVWQKLEEE
Sbjct: 1 MSSG-TVRRVSRQDIQLVQNLIERCLQLYMNQKEVVDTLLEQAKIEPGFTELVWQKLEEE 59
Query: 67 NREFFKAYYVRLMLKNQIMVFNKLLEDQYRLMCKEQPSGVPSMPPTTNGSNMGTLNQNA- 125
NREFFKAYY+RLM+K+QIM FNKLLE Q M + P+GV S+ TNGS++ ++NQ
Sbjct: 60 NREFFKAYYLRLMVKHQIMEFNKLLEQQVHHMRQMHPTGVASV-QNTNGSHLQSMNQKQL 118
Query: 126 CFLPDTTPSTAMPDSL---LPNGSSSGIVNGTPSSDQFIYAGKVIHGXXXXXXXXXXXXX 182
C+ + T + +S + + S+ +NG+ + + + + I
Sbjct: 119 CYPSEHTDQSLKSESAHHPMASSLSNAFLNGSSTLNTNVPSSINISTHARRVDASPNMLS 178
Query: 183 XHNSTAGRFNGDNGTTIKTEASYSGNSDFGFCNESAFLEPCQSIGDASGGSFSSSELNGQ 242
+ G NG IK+E +++ + F + E LE ++GD S +F S+E N Q
Sbjct: 179 SQTTNMPMMQGMNGGMIKSETAFTNPASFMYGGERNALEGHSAVGDTSIPNF-SNESNNQ 237
Query: 243 PLGDPIMDMDSSSFGFLSQIPRNFSFSDLTEDFSQSAEILENYGRSPFIPSEPNNFSEST 302
PL DP+++ ++S+FGFL QIPRNFS SDLT DFSQS+EILE+Y RSPF+ NF +S
Sbjct: 238 PLSDPLLEAEASTFGFLGQIPRNFSLSDLTADFSQSSEILESYDRSPFLVPNAENFLDSR 297
Query: 303 PGDHAEIGNRRLDTISEGVSYEDFGSD 329
+ N+RLDTISEG SY++ GS+
Sbjct: 298 DRGEYQGDNKRLDTISEGFSYDNIGSE 324
>AT5G04090.2 | chr5:1105672-1107629 REVERSE LENGTH=306
Length = 305
Score = 233 bits (595), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 144/319 (45%), Positives = 190/319 (59%), Gaps = 21/319 (6%)
Query: 13 VRKVSRQDIQLVQNLIERCLQLYMNQKEVVETLSFQAKIEPSFTELVWQKLEEENREFFK 72
VR+VSR+DIQLVQNLIERCLQLYMNQKEVV+TL QAKIEP FTELVWQKLEEENREFFK
Sbjct: 6 VRRVSREDIQLVQNLIERCLQLYMNQKEVVDTLLEQAKIEPGFTELVWQKLEEENREFFK 65
Query: 73 AYYVRLMLKNQIMVFNKLLEDQYRLMCKEQPSGVPSMPPTTNGSNMGTLNQNACFLPDTT 132
AYY+RLM+K+QIM +N+LLE Q M + P+ S+ NGS++ +NQ
Sbjct: 66 AYYLRLMVKHQIMEYNELLEQQINHMRQMHPTAGASV-RNRNGSHVPPMNQQQLLYERKE 124
Query: 133 PSTAMPDSLLP--NGSSSGIVNGTPSSDQFIYAGKVIHGXXXXXXXXXXXXXXHNSTAGR 190
P + P+ P NG S I PS F + + +
Sbjct: 125 PDQSSPNLSSPYLNG-GSAINTNIPSYVDFSSHSRRVDPSPNSLSLQA-------TNMPL 176
Query: 191 FNGDNGTTIKTEASYSGNSDFGFCNESAFLEPCQSIGDASGGSFSSSELNGQPLGDPIMD 250
G IK+E +Y + + + E+ ++GD + SFS+ N Q L DP++D
Sbjct: 177 MQG----MIKSETAYQNCAPYMYGGEAQ-----STVGDVTIASFSNDSSN-QSLNDPLVD 226
Query: 251 MDSSSFGFLSQIPRNFSFSDLTEDFSQSAEILENYGRSPFIPSEPNNFSESTPGDHAEIG 310
D+ +FG L QIP+NFS SDLT DFSQS++ILE+Y SPF+ ++ NF +S+ +
Sbjct: 227 PDAPTFGSLGQIPQNFSLSDLTADFSQSSDILESYEGSPFLLADAENFLDSSERVEHQGD 286
Query: 311 NRRLDTISEGVSYEDFGSD 329
+ RL TIS G SYE+F S+
Sbjct: 287 HERLRTISSGFSYENFRSN 305
>AT3G61700.2 | chr3:22836414-22838803 FORWARD LENGTH=365
Length = 364
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 157/327 (48%), Gaps = 71/327 (21%)
Query: 12 DVRKVSRQDIQLVQNLIERCLQLYMNQKEVVETLSFQAKIEPSFTELVWQKLEEENREFF 71
D RKVSRQDI+LVQNLIERCLQLYMN+ EVV+TL +A+I+P FT LVWQKLEEEN +FF
Sbjct: 46 DSRKVSRQDIELVQNLIERCLQLYMNRDEVVKTLLTRARIDPGFTTLVWQKLEEENADFF 105
Query: 72 KAYYVRLMLKNQIMVFNKLLEDQYRLMCKEQPSGVPSMP--PTTNGSN-MGTLNQNACFL 128
+AYY+RL LK QI++FN LLE QY LM + P G P +P P NG + M +N +
Sbjct: 106 RAYYIRLKLKKQIILFNHLLEHQYHLM--KYPPGPPKVPLAPIQNGMHPMAPVN-----M 158
Query: 129 PDTTPSTAMPDSLLPNG---------SSSGIVNGTPSSDQFIYAGKVIHGXXXXXXXXXX 179
P P P +P SS +VNG P+ F
Sbjct: 159 PMGYPVLQHPQMHVPGHPHHLDAMGVSSCHVVNGVPAPANF------------------- 199
Query: 180 XXXXHNSTAGRFNGDNGTTIKTEASYSGNSDFGFCNESAFLEPCQSIGD-ASGGS--FSS 236
R N N I T A+ N A E S AS G F++
Sbjct: 200 -------HPLRMNTANDMVIDTTAN-DATPQVIPPNSGAMPEMVASPASVASSGHFPFAA 251
Query: 237 SELNGQPLGDPIMDM---------------DSSSFGFLSQIPRNFSFSDLTEDFSQSAEI 281
S+++G + ++D S QIP NFS SDLT D S ++
Sbjct: 252 SDMSGMVMDTSVLDSAFTSDVGPDGEGAGNSRDSLRSFDQIPWNFSLSDLTADLSNLGDM 311
Query: 282 -------LENYGRSPFIPSEPNNFSES 301
L NY SPF+PS+ F +S
Sbjct: 312 YVADLGALGNYPGSPFLPSDSEIFLDS 338
>AT2G46420.1 | chr2:19054891-19056830 FORWARD LENGTH=364
Length = 363
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 123/334 (36%), Positives = 152/334 (45%), Gaps = 98/334 (29%)
Query: 12 DVRKVSRQDIQLVQNLIERCLQLYMNQKEVVETLSFQAKIEPSFTELVWQKLEEENREFF 71
D RKVSRQDI+LVQNLIERCLQLYM++ EVV+TL +A+I+P FT LVWQKLEEEN EFF
Sbjct: 43 DGRKVSRQDIELVQNLIERCLQLYMSRDEVVKTLLTRARIDPGFTTLVWQKLEEENAEFF 102
Query: 72 KAYYVRLMLKNQIMVFNKLLEDQYRLMCKEQPSGVPSMPPTTNGSNMGTLNQNACFLPDT 131
+AYY+RL LK QI+VFN LLE QY L S VP +P M ++N +P
Sbjct: 103 RAYYIRLKLKKQIVVFNHLLEHQYHLTKYNVHSKVPLVPMQNGIHPMASVNN----MPMG 158
Query: 132 TPSTAMP----------DSLLPNGSSSGIVNGTPSSDQFIYAGKVIHGXXXXXXXXXXXX 181
P P D + SS +VNG P+ F
Sbjct: 159 YPVLQHPQMHAQGHPHLDPMSCGMSSCHVVNGVPAPANF--------------------- 197
Query: 182 XXHNSTAGRFNGDNGTTIKTEASY--------SGNSDFGFCNESAFLEPCQSIGDASGGS 233
R N N I T + SG SD P AS G
Sbjct: 198 -----QPMRINSGNDMVIDTTMAEPTPMIPPNSGMSDM----------PVSPASVASSGH 242
Query: 234 --FSSSELNGQPLGDPIMDMDSSSF--GFLS---------------------------QI 262
F++S+++G M MD+S+ F S QI
Sbjct: 243 FPFAASDMSG-------MGMDTSALDSAFTSDVGTSVGLQLGSDGGAGNSRDPLRPFDQI 295
Query: 263 PRNFSFSDLTEDFSQSAEI--LENYGRSPFIPSE 294
P NFS SDLT D S ++ L NY SPF+PS+
Sbjct: 296 PWNFSLSDLTADLSNLGDLGALGNYPGSPFLPSD 329
>AT2G29605.1 | chr2:12657909-12660087 REVERSE LENGTH=402
Length = 401
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 14 RKVSRQDIQLVQNLIERCLQLYMNQKEVVETLSFQAKIEPSFTELVWQKLEEENREFFKA 73
R+ + I ++N+I C++ YM+ +E V + KI T+ +W++L++EN +FF
Sbjct: 15 RRNVSETIDTIKNIIATCIRKYMSLEETVNYMQENHKISHHLTKPIWEQLQKENADFFNK 74
Query: 74 YYVRLMLKNQIMVFNKLLEDQYRLMCKEQPSGVPSMPPTTNGSNMGTLNQNACFLPDTTP 133
Y++ L QI +FN L Q LM + + + T++ S + TLN L DT
Sbjct: 75 YHLIRELARQIKLFNSFLGKQVSLMLENGDFDISTA--TSDRSELSTLNMGMSALDDTNG 132
Query: 134 STA--MPDSLLPNGSSSGI 150
T +P +PNG + I
Sbjct: 133 LTVNQLP---IPNGQQNHI 148
>AT3G55240.1 | chr3:20473876-20474705 REVERSE LENGTH=96
Length = 95
Score = 64.7 bits (156), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 21 IQLVQNLIERCLQLYMNQKEVVETLSFQAKIEPSFTELVWQKLEEENREFFKAYYVRLML 80
I +VQ++IE+CL +M+++E VE LS A I P T VW++LE+EN+EFFKAY R
Sbjct: 10 IHMVQHMIEKCLIFHMSKEECVEALSKHANITPVITSTVWKELEKENKEFFKAYEERQSK 69
Query: 81 KNQI 84
+ Q+
Sbjct: 70 QEQM 73
>AT3G28990.1 | chr3:11002351-11003046 REVERSE LENGTH=89
Length = 88
Score = 59.3 bits (142), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 21 IQLVQNLIERCLQLYMNQKEVVETLSFQAKIEPSFTELVWQKLEEENREFFKAYYVRLML 80
I LVQ++IE CL M+++E +E LS A I P T VW++L +EN++FF+ Y +LM
Sbjct: 10 IHLVQHMIETCLTFNMSKEECMEALSENANINPIITSTVWKELVKENKDFFETYEQKLMK 69
Query: 81 KNQI 84
K +
Sbjct: 70 KESM 73
>AT5G02580.1 | chr5:579965-580454 FORWARD LENGTH=92
Length = 91
Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 21 IQLVQNLIERCLQLYMNQKEVVETLSFQAKIEPSFTELVWQKLEEENREFFKAYYVR 77
I LV +LIE C+ M ++E ++ L A I+P T VW++L +EN+EFF+AY R
Sbjct: 12 IHLVHHLIEECIVFNMGKEECMDALFKHANIKPIITSTVWKELAKENKEFFEAYERR 68
>AT1G49700.1 | chr1:18388792-18390496 REVERSE LENGTH=280
Length = 279
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 21 IQLVQNLIER-CLQLYMNQKEVVETLSFQAKIEPSFTELVWQKLEEENREFFKAYYVRLM 79
I V+ IER C+Q YM+ +E + + I T +W+ L+ EN FFK Y R
Sbjct: 11 IDYVKEKIERRCIQKYMSLEETMTYMYDHDHIPKHITATIWEHLQRENPNFFKEYNKRCE 70
Query: 80 LKNQIMVFNKLLEDQYRLMCKEQPSGVPSMPPTTN 114
L QI+ N LL Q LM + V + P T
Sbjct: 71 LVRQIVTLNDLLAQQIDLMQRLSQLDVGTTAPVTK 105
>AT3G45800.1 | chr3:16829482-16832207 REVERSE LENGTH=591
Length = 590
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 21 IQLVQNLIERCLQLYMNQKEVVETLSFQAKIEPSFTELVWQKLEEENREFFKAYYVR--L 78
I V+NLIE C+ YM+ +E V L I T +W++L++E+ EFFK YY L
Sbjct: 122 IDKVKNLIETCIYKYMSLEETVTYLEDNHNISHHLTITIWEQLQKESPEFFKKYYFHFSL 181
Query: 79 MLKN 82
M++N
Sbjct: 182 MVEN 185
>AT2G11623.1 | chr2:4660870-4661415 REVERSE LENGTH=111
Length = 110
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 24 VQNLIERCLQLYMNQKEVVETLSFQAKIEPSFTELVWQKLEEENREFFKAYYVRLMLKNQ 83
V+NLIE C+ YM+ +E + KI T+ +W++L++E+ EFFK YY L Q
Sbjct: 46 VKNLIETCIYKYMSLEETETYVEDNHKISHHLTKPIWEQLQKESPEFFKKYYFLCELARQ 105
Query: 84 IMVFN 88
I+ F+
Sbjct: 106 IVSFS 110
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.131 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,493,849
Number of extensions: 336853
Number of successful extensions: 796
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 794
Number of HSP's successfully gapped: 12
Length of query: 329
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 230
Effective length of database: 8,392,385
Effective search space: 1930248550
Effective search space used: 1930248550
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 112 (47.8 bits)