BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0687800 Os06g0687800|AK072593
(544 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0687800 Similar to Pincher (EH-domain containing 4) 1094 0.0
Os02g0158100 Dynamin family protein 936 0.0
Os04g0669300 Dynamin family protein 856 0.0
Os06g0728600 EPS15 homology (EH) domain containing protein 75 1e-13
Os03g0130500 EPS15 homology (EH) domain containing protein 70 4e-12
>Os06g0687800 Similar to Pincher (EH-domain containing 4)
Length = 544
Score = 1094 bits (2830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/544 (97%), Positives = 531/544 (97%)
Query: 1 MEIGQHPASGYSKEHQKTYQEWFAFADSDGDGRITGPDAIKFFAMSKLPRADLKQVWAIA 60
MEIGQHPASGYSKEHQKTYQEWFAFADSDGDGRITGPDAIKFFAMSKLPRADLKQVWAIA
Sbjct: 1 MEIGQHPASGYSKEHQKTYQEWFAFADSDGDGRITGPDAIKFFAMSKLPRADLKQVWAIA 60
Query: 61 DSKRQGYLGFSEFVTAMQLVSLAQAGDEITQDSLKRDDLGSLNPPTMDGLDALLVKSKHH 120
DSKRQGYLGFSEFVTAMQLVSLAQAGDEITQDSLKRDDLGSLNPPTMDGLDALLVKSKHH
Sbjct: 61 DSKRQGYLGFSEFVTAMQLVSLAQAGDEITQDSLKRDDLGSLNPPTMDGLDALLVKSKHH 120
Query: 121 AKRVDPDIDGFPQAQSPATSQWFSSKSSKKIPLNAVTSVIDGLKKLYIEKLKPLEVTYKF 180
AKRVDPDIDGFPQAQSPATSQWFSSKSSKKIPLNAVTSVIDGLKKLYIEKLKPLEVTYKF
Sbjct: 121 AKRVDPDIDGFPQAQSPATSQWFSSKSSKKIPLNAVTSVIDGLKKLYIEKLKPLEVTYKF 180
Query: 181 NDFVSPLLTNSDFDAKPMVMLLGQYSTGKTTFIKHLLRTSYPGAHIGPEPTTDRFVVVMS 240
NDFVSPLLTNSDFDAKPMVMLLGQYSTGKTTFIKHLLRTSYPGAHIGPEPTTDRFVVVMS
Sbjct: 181 NDFVSPLLTNSDFDAKPMVMLLGQYSTGKTTFIKHLLRTSYPGAHIGPEPTTDRFVVVMS 240
Query: 241 GPDERTIPGNTIAVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGEK 300
GPDERTIPGNTIAVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGEK
Sbjct: 241 GPDERTIPGNTIAVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGEK 300
Query: 301 QRTQRSYDFTGVTSWFAAKCDLILLLFDPHKLDISDEFKRVIGSLRGHDDKIRVVLNKAD 360
QRTQRSYDFTGVTSWFAAKCDLILLLFDPHKLDISDEFKRVIGSLRGHDDKIRVVLNKAD
Sbjct: 301 QRTQRSYDFTGVTSWFAAKCDLILLLFDPHKLDISDEFKRVIGSLRGHDDKIRVVLNKAD 360
Query: 361 QVDTQQLMRVYGALMWSLGKVLNTPEVARVYIGSFNDKPVNESAVGPIGKELFEREQDDL 420
QVDTQQLMRVYGALMWSLGKVLNTPEVARVYIGSFNDKPVNESAVGPIGKELFEREQDDL
Sbjct: 361 QVDTQQLMRVYGALMWSLGKVLNTPEVARVYIGSFNDKPVNESAVGPIGKELFEREQDDL 420
Query: 421 LSDLKDIPKKACDRRINEFVXXXXXXXXXXXXXGHLKKEMPAMMGKAKAQQRLIDNLENE 480
LSDLKDIPKKACDRRINEFV GHLKKEMPAMMGKAKAQQRLIDNLENE
Sbjct: 421 LSDLKDIPKKACDRRINEFVKRARAAKIHAHIIGHLKKEMPAMMGKAKAQQRLIDNLENE 480
Query: 481 FAKVQREQHLPAGDFPYVEHFRDVLGGYSIDKFEKIKPKMVQAVDDMLGYDIPELLKNFR 540
FAKVQREQHLPAGDFPYVEHFRDVLGGYSIDKFEKIKPKMVQAVDDMLGYDIPELLKNFR
Sbjct: 481 FAKVQREQHLPAGDFPYVEHFRDVLGGYSIDKFEKIKPKMVQAVDDMLGYDIPELLKNFR 540
Query: 541 NPYE 544
NPYE
Sbjct: 541 NPYE 544
>Os02g0158100 Dynamin family protein
Length = 543
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/546 (82%), Positives = 487/546 (89%), Gaps = 5/546 (0%)
Query: 1 MEIGQHPASGYSKEHQKTYQEWFAFADSDGDGRITGPDAIKFFAMSKLPRADLKQVWAIA 60
ME+ + S SKEH K Y WFA AD DGDGR+TG DA KFFAMS L RADLKQVWAIA
Sbjct: 1 MELAR---SACSKEHHKIYAGWFAVADPDGDGRVTGADATKFFAMSGLSRADLKQVWAIA 57
Query: 61 DSKRQGYLGFSEFVTAMQLVSLAQAGDEITQDSLKRDDLGSLNPPTMDGLDALLVKSKHH 120
D+KRQG+LGF EFV AMQLVSLAQAG+EITQDSLKR+DL SL+PP M+GLD LL +SK
Sbjct: 58 DTKRQGFLGFGEFVAAMQLVSLAQAGEEITQDSLKREDLSSLDPPVMEGLDELLARSKAG 117
Query: 121 AKRVDPDIDGFPQAQSPATSQWFSSKSSKK--IPLNAVTSVIDGLKKLYIEKLKPLEVTY 178
KRV P+ +G PQ Q + + WFSSKS+KK +PL AVTSVIDGLK+LY+EKLKPLEV Y
Sbjct: 118 VKRVHPEENGAPQVQVHSANSWFSSKSAKKMQVPLTAVTSVIDGLKRLYVEKLKPLEVAY 177
Query: 179 KFNDFVSPLLTNSDFDAKPMVMLLGQYSTGKTTFIKHLLRTSYPGAHIGPEPTTDRFVVV 238
+FNDF SPLLT+SDFDAKPMVMLLGQYSTGKTTFIKHLL+TSYPGAH+GPEPTTDRFVVV
Sbjct: 178 RFNDFASPLLTSSDFDAKPMVMLLGQYSTGKTTFIKHLLQTSYPGAHVGPEPTTDRFVVV 237
Query: 239 MSGPDERTIPGNTIAVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSG 298
MSG DERTIPGNTIAVQADMPF+GLTTFG AFLSKFECSQMPHPLL+HITFVDTPGVLSG
Sbjct: 238 MSGSDERTIPGNTIAVQADMPFTGLTTFGGAFLSKFECSQMPHPLLDHITFVDTPGVLSG 297
Query: 299 EKQRTQRSYDFTGVTSWFAAKCDLILLLFDPHKLDISDEFKRVIGSLRGHDDKIRVVLNK 358
EKQRTQRSYDFTG+TSWFAAKCDLILLLFDPHKLDISDEFKRVI SLRGHDDKIRVVLNK
Sbjct: 298 EKQRTQRSYDFTGITSWFAAKCDLILLLFDPHKLDISDEFKRVIASLRGHDDKIRVVLNK 357
Query: 359 ADQVDTQQLMRVYGALMWSLGKVLNTPEVARVYIGSFNDKPVNESAVGPIGKELFEREQD 418
ADQVDTQQLMRVYGALMWSLGKVLNTPEVARVYIGSFNDKPVNESAVGPIGK+LFE+EQD
Sbjct: 358 ADQVDTQQLMRVYGALMWSLGKVLNTPEVARVYIGSFNDKPVNESAVGPIGKDLFEKEQD 417
Query: 419 DLLSDLKDIPKKACDRRINEFVXXXXXXXXXXXXXGHLKKEMPAMMGKAKAQQRLIDNLE 478
DLL DLKDIPKKACDRR+NEFV GHLKKEMPAMMGKAKAQQRLIDNL
Sbjct: 418 DLLCDLKDIPKKACDRRVNEFVKRARAAKIHAYIIGHLKKEMPAMMGKAKAQQRLIDNLG 477
Query: 479 NEFAKVQREQHLPAGDFPYVEHFRDVLGGYSIDKFEKIKPKMVQAVDDMLGYDIPELLKN 538
+EFAKVQRE HLPAGDFP VEHF++VLGGY+IDKFEK+KPK+VQAVDDML YDIPELLKN
Sbjct: 478 DEFAKVQREYHLPAGDFPDVEHFKEVLGGYNIDKFEKMKPKLVQAVDDMLAYDIPELLKN 537
Query: 539 FRNPYE 544
FRNPYE
Sbjct: 538 FRNPYE 543
>Os04g0669300 Dynamin family protein
Length = 542
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/532 (76%), Positives = 462/532 (86%), Gaps = 2/532 (0%)
Query: 13 KEHQKTYQEWFAFADSDGDGRITGPDAIKFFAMSKLPRADLKQVWAIADSKRQGYLGFSE 72
+E ++ Y WF+ AD DGDGR+TG DA+KFFAMS L R +LKQVWAIADSKRQGYLGFSE
Sbjct: 13 REQREAYLRWFSLADDDGDGRVTGKDALKFFAMSNLSRPELKQVWAIADSKRQGYLGFSE 72
Query: 73 FVTAMQLVSLAQAGDEITQDSLKRDDLGSLNPPTMDGLDALLVKSKHHAKRVDPDIDGFP 132
F+TAMQLVSLAQAG+EI+QD+L DL +L PPTM+GLD L + + + DI
Sbjct: 73 FMTAMQLVSLAQAGNEISQDTLAHADLETLLPPTMEGLDKKL--KNNSMSKSNSDIVVRH 130
Query: 133 QAQSPATSQWFSSKSSKKIPLNAVTSVIDGLKKLYIEKLKPLEVTYKFNDFVSPLLTNSD 192
++ PA++ WF+SKS KKIPL +VTS+IDGLKK YIEKL+PLE TY+F+DFVSPLLT+SD
Sbjct: 131 PSELPASANWFNSKSGKKIPLRSVTSIIDGLKKSYIEKLRPLEKTYQFDDFVSPLLTSSD 190
Query: 193 FDAKPMVMLLGQYSTGKTTFIKHLLRTSYPGAHIGPEPTTDRFVVVMSGPDERTIPGNTI 252
FDAKPMVMLLGQYSTGKTTFIKHLL+T+YPGAHIGPEPTTDRFVV+ SGPDER IPGNTI
Sbjct: 191 FDAKPMVMLLGQYSTGKTTFIKHLLKTNYPGAHIGPEPTTDRFVVITSGPDERCIPGNTI 250
Query: 253 AVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGEKQRTQRSYDFTGV 312
AVQADMP+SGL++FGTAFLSKFECSQMPHPLL+HITFVDTPGVLSGEKQRTQRSYDFTGV
Sbjct: 251 AVQADMPYSGLSSFGTAFLSKFECSQMPHPLLDHITFVDTPGVLSGEKQRTQRSYDFTGV 310
Query: 313 TSWFAAKCDLILLLFDPHKLDISDEFKRVIGSLRGHDDKIRVVLNKADQVDTQQLMRVYG 372
TSWFAAKCDLILLLFDPHKLDISDEFKRVIGSL+GHDDKIR+VLNKADQVD QQLMRVYG
Sbjct: 311 TSWFAAKCDLILLLFDPHKLDISDEFKRVIGSLKGHDDKIRIVLNKADQVDAQQLMRVYG 370
Query: 373 ALMWSLGKVLNTPEVARVYIGSFNDKPVNESAVGPIGKELFEREQDDLLSDLKDIPKKAC 432
AL+WSLGKVLNTPEV RVYIGSFNDKP+ E+ GP+GKELFE+EQ+DLLSDL DIPKKAC
Sbjct: 371 ALLWSLGKVLNTPEVMRVYIGSFNDKPIRETVAGPLGKELFEKEQEDLLSDLNDIPKKAC 430
Query: 433 DRRINEFVXXXXXXXXXXXXXGHLKKEMPAMMGKAKAQQRLIDNLENEFAKVQREQHLPA 492
DRRINEFV HLKKEMPA+MGKAKAQQRL+D L+ +FAKVQ+E HLPA
Sbjct: 431 DRRINEFVKRSRSAKVHAHIISHLKKEMPALMGKAKAQQRLLDTLDEQFAKVQKELHLPA 490
Query: 493 GDFPYVEHFRDVLGGYSIDKFEKIKPKMVQAVDDMLGYDIPELLKNFRNPYE 544
GDFP V+ +R+ L Y+ DKFE++KPK+VQ VDDML YDIP+LLK+FRNPYE
Sbjct: 491 GDFPSVDEYRETLSAYNFDKFERLKPKLVQGVDDMLAYDIPDLLKSFRNPYE 542
>Os06g0728600 EPS15 homology (EH) domain containing protein
Length = 1188
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%)
Query: 16 QKTYQEWFAFADSDGDGRITGPDAIKFFAMSKLPRADLKQVWAIADSKRQGYLGFSEFVT 75
+ + +F AD D DGRI+G +A+ FF S LP+ L Q+W AD R G+LG +F
Sbjct: 2 EAAFDAYFRAADLDRDGRISGQEAVAFFKASALPQPVLAQIWTYADKNRTGFLGREDFYN 61
Query: 76 AMQLVSLAQAGDEITQDSLK 95
A++LV++AQ+G E+T D ++
Sbjct: 62 ALRLVTVAQSGRELTPDIVR 81
>Os03g0130500 EPS15 homology (EH) domain containing protein
Length = 1068
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%)
Query: 17 KTYQEWFAFADSDGDGRITGPDAIKFFAMSKLPRADLKQVWAIADSKRQGYLGFSEFVTA 76
+ ++ +F AD + DGRI+G +A+ FF + LP+ L QVW AD + G+LG EF A
Sbjct: 5 EAFEAYFRRADLNQDGRISGQEAVAFFQGANLPQQVLAQVWMHADKNKTGFLGRPEFFNA 64
Query: 77 MQLVSLAQAGDEITQD 92
++LV++AQ+G ++T D
Sbjct: 65 LRLVTVAQSGRQLTPD 80
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,494,723
Number of extensions: 773169
Number of successful extensions: 1939
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1937
Number of HSP's successfully gapped: 5
Length of query: 544
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 438
Effective length of database: 11,501,117
Effective search space: 5037489246
Effective search space used: 5037489246
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)