Os02g0158100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dynamin family protein.
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Os02g0158100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dynamin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 272.14 | 0.775 | 4.77 | -1.04 | 2.56 | -2.93 | -0.798 | -4.25 | 1.41 | 7.69 | 0.9334 | 1398 | -- | -- |
| 282.86 | 0.783 | 4.83 | -1.46 | 2.49 | -2 | -0.807 | -- | 1.35 | 7.46 | 0.9397 | 1412 | -- | -- |
| 270.67 | 0.766 | 4.74 | -0.943 | 2.63 | -3.21 | -- | -5.17 | 1.5 | 7.61 | 0.446 | 1390 | -- | -- |
| 285.81 | 0.787 | 4.84 | -1.53 | 2.47 | -2.09 | -- | -- | 1.34 | 7.44 | 0.9754 | 1412 | -- | -- |
| 560.09 | 1.1 | 4.85 | -1.15 | -- | -3.56 | -- | -4.47 | 1.41 | -- | 0.6 | 1477 | -- | -- |
| 332.36 | 0.855 | 4.79 | -0.991 | 2.41 | -- | -1.14 | -- | 1.6 | 7.29 | -- | -- | -- | -- |
| 335.81 | 0.858 | 4.79 | -1.02 | 2.41 | -- | -- | -- | 1.61 | 7.25 | -- | -- | -- | -- |
| 568.86 | 1.11 | 4.92 | -1.47 | -- | -2.59 | -- | -- | 1.31 | -- | 2.078 | 1492 | -- | -- |
| 335.84 | 0.854 | 4.79 | -- | 2.45 | -1.37 | -- | -- | 1.55 | 7.5 | 2.56 | 1401 | -- | -- |
| 643.4 | 1.19 | 4.84 | -0.974 | -- | -- | -- | -- | 1.65 | -- | -- | -- | -- | -- |
| 363.06 | 0.891 | 4.76 | -- | 2.4 | -- | -- | -- | 1.72 | 7.28 | -- | -- | -- | -- |
| 615 | 1.16 | 4.82 | -- | -- | -0.705 | -- | -- | 1.74 | -- | 2.721 | 1500 | -- | -- |
| 668.43 | 1.21 | 4.82 | -- | -- | -- | -- | -- | 1.76 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 264.92 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 264.92 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 6 | 267.57 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 9 | 268.00 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 20 |
| 25 | 270.90 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 14 | NA |
| 35 | 272.25 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 39 | 272.27 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 45 | 272.30 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 57 | 273.26 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 10 |
| 59 | 273.28 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 7 |
| 121 | 273.68 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 124 | 273.73 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 176 | 274.43 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 190 | 274.75 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 18 |
| 191 | 274.75 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 20 |
| 196 | 274.78 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 4 | 16 |
| 209 | 274.82 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 21 | 23 |
| 211 | 274.83 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 233 | 274.88 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 242 | 274.92 | radiation | 1.0 | 1440 | < th | dose dependent | no | NA | NA |
| 277 | 275.37 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 281 | 275.40 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 285 | 275.46 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 3 |
| 305 | 275.63 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 338 | 276.12 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 360 | 276.48 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 376 | 276.82 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 383 | 276.96 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 403 | 277.23 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 410 | 277.27 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 420 | 277.37 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 508 | 277.80 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 532 | 277.92 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 577 | 278.32 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 578 | 278.32 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 584 | 278.38 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 586 | 278.39 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 589 | 278.47 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 590 | 278.47 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 594 | 278.51 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 16 | 15 |
| 595 | 278.52 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 603 | 278.59 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 662 | 279.10 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 670 | 279.25 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 679 | 279.33 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 699 | 279.52 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 733 | 279.72 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 817 | 280.05 | radiation | 1.0 | 1440 | < th | dose independent | sin | 15 | NA |
| 902 | 280.34 | radiation | 1.0 | 1440 | > th | dose independent | sin | 15 | NA |
| 974 | 280.49 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 12 | NA |