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Os03g0130500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : EPS15 homology (EH) domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0134) R2 : 0.652
β1 : 1.32 (0.0492) R2dD : 0.573 R2D : 0.379
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.468 (0.0287) R2dN8 : 0.272 R2N8 : 0.0786
σ : 0.252
deviance : 29.17
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
17.41 0.196 11.3 1.32 0.363 0.362 0.213 -0.765 0.516 0.212 92 342 -- --
18.17 0.199 11.3 1.3 0.366 0.388 0.242 -- 0.514 23.9 92.33 365 -- --
17.54 0.195 11.3 1.32 0.373 0.364 -- -0.835 0.51 0.495 92.64 373 -- --
18.37 0.2 11.3 1.29 0.366 0.36 -- -- 0.504 0.345 92.63 350 -- --
22.9 0.223 11.3 1.33 -- 0.384 -- 0.0146 0.568 -- 88.38 3 -- --
19.73 0.208 11.3 1.31 0.39 -- 0.126 -- 0.461 1.22 -- -- -- --
19.78 0.208 11.3 1.31 0.39 -- -- -- 0.46 1.34 -- -- -- --
20.01 0.209 11.3 1.3 -- 0.379 -- -- 0.506 -- 73 2 -- --
60.94 0.364 11.3 -- 0.39 0.483 -- -- 0.394 23.4 88.92 392 -- --
29.17 0.252 11.3 1.32 -- -- -- -- 0.468 -- -- -- -- --
64.92 0.377 11.4 -- 0.413 -- -- -- 0.314 1.45 -- -- -- --
63.57 0.371 11.3 -- -- 0.459 -- -- 0.404 -- 82.51 5 -- --
75.4 0.405 11.3 -- -- -- -- -- 0.321 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 16.71 precipitation 0.1 270 < th dose independent sin 4 NA
2 16.71 precipitation 0.1 270 < th dose dependent sin 4 NA
4 16.76 precipitation 0.1 720 < th dose independent rect. 19 16
6 16.76 precipitation 0.1 720 < th dose dependent rect. 19 16
7 16.89 precipitation 0.1 720 < th dose independent sin 8 NA
8 16.89 precipitation 0.1 720 < th dose dependent sin 8 NA
13 17.00 humidity 70.0 10 > th dose dependent sin 8 NA
24 17.11 precipitation 0.1 720 < th dose independent rect. 23 8
26 17.11 precipitation 0.1 720 < th dose dependent rect. 23 8
34 17.15 humidity 70.0 10 > th dose dependent rect. 22 14
35 17.15 humidity 70.0 10 > th dose dependent rect. 18 18
41 17.21 humidity 90.0 10 < th dose independent sin 1 NA
83 17.35 humidity 70.0 10 > th dose dependent rect. 20 16
93 17.37 wind 1.0 720 > th dose independent rect. 23 19
95 17.38 temperature 20.0 4320 < th dose independent rect. 21 1
97 17.39 wind 1.0 720 > th dose independent rect. 23 17
107 17.40 humidity 80.0 270 > th dose dependent rect. 22 16
109 17.41 temperature 20.0 4320 > th dose independent rect. 21 1
114 17.41 humidity 70.0 10 > th dose dependent rect. 16 20
120 17.43 wind 1.0 720 > th dose independent sin 19 NA
123 17.43 humidity 70.0 10 > th dose dependent rect. 18 14
131 17.45 temperature 20.0 4320 < th dose independent rect. 17 5
138 17.46 temperature 20.0 4320 < th dose independent rect. 17 2
149 17.47 wind 1.0 43200 < th dose independent rect. 23 7
158 17.48 temperature 20.0 4320 > th dose independent rect. 17 5
160 17.48 wind 1.0 720 > th dose independent rect. 6 21
162 17.48 temperature 20.0 4320 < th dose dependent rect. 21 2
164 17.48 humidity 50.0 720 > th dose dependent rect. 18 11
170 17.49 temperature 20.0 4320 < th dose dependent rect. 18 5
173 17.49 humidity 50.0 720 > th dose dependent rect. 17 13
177 17.50 humidity 90.0 30 > th dose independent sin 4 NA
189 17.51 radiation 10.0 1440 < th dose independent rect. 15 5
210 17.52 wind 1.0 720 > th dose independent rect. 23 21
225 17.53 humidity 90.0 30 > th dose independent rect. 24 12
240 17.53 humidity 70.0 30 > th dose dependent rect. 7 23
242 17.54 temperature 20.0 1440 < th dose independent rect. 1 2
267 17.54 humidity 50.0 720 > th dose dependent rect. 18 16
279 17.55 temperature 20.0 1440 > th dose independent rect. 24 4
282 17.55 humidity 90.0 720 < th dose independent rect. 6 5
292 17.55 humidity 90.0 30 < th dose independent rect. 24 13
299 17.55 precipitation 0.1 270 > th dose independent rect. 21 20
314 17.56 temperature 20.0 1440 > th dose independent rect. 2 1
324 17.56 precipitation 0.1 720 > th dose independent rect. 23 5
332 17.56 precipitation 0.1 270 > th dose independent rect. 23 18
339 17.56 temperature 20.0 4320 < th dose dependent rect. 18 1
341 17.56 humidity 60.0 30 > th dose dependent rect. 16 14
349 17.56 radiation 10.0 720 < th dose dependent rect. 15 17
360 17.57 wind 1.0 43200 > th dose independent rect. 24 6
374 17.57 humidity 50.0 30 > th dose dependent rect. 14 16
384 17.58 precipitation 0.1 270 > th dose independent sin 9 NA
385 17.58 atmosphere 1010.0 720 < th dose independent rect. 22 1
397 17.58 atmosphere 1010.0 270 < th dose dependent rect. 23 8
399 17.58 humidity 70.0 10 > th dose dependent rect. 22 12
400 17.58 humidity 80.0 90 > th dose dependent rect. 1 14
426 17.59 wind 1.0 43200 < th dose dependent rect. 24 6
429 17.59 humidity 60.0 30 > th dose dependent rect. 18 12
457 17.60 precipitation 0.1 720 > th dose dependent rect. 24 4
464 17.60 humidity 80.0 10 > th dose dependent rect. 24 14
472 17.60 precipitation 0.1 270 > th dose dependent rect. 24 17
486 17.61 radiation 1.0 90 > th dose independent sin 3 NA
498 17.61 radiation 1.0 90 > th dose independent rect. 18 19
502 17.61 humidity 50.0 720 > th dose dependent rect. 18 5
503 17.61 humidity 70.0 10 > th dose dependent rect. 22 10
505 17.61 humidity 80.0 10 > th dose dependent rect. 24 12
599 17.63 radiation 10.0 720 < th dose dependent rect. 20 23
606 17.64 humidity 90.0 270 < th dose independent rect. 6 12
614 17.64 precipitation 0.1 270 > th dose dependent sin 8 NA
640 17.65 precipitation 0.1 720 < th dose independent rect. 15 16
646 17.65 humidity 50.0 720 > th dose dependent rect. 18 7
653 17.65 precipitation 0.1 720 < th dose dependent rect. 15 16
705 17.67 temperature 20.0 1440 < th dose independent rect. 21 7
708 17.67 precipitation 0.1 270 > th dose independent rect. 23 11
712 17.67 temperature 20.0 270 > th dose independent rect. 12 14
714 17.67 precipitation 0.1 270 > th dose independent rect. 19 15
746 17.67 humidity 90.0 270 > th dose dependent rect. 4 23
764 17.68 temperature 20.0 720 > th dose independent rect. 7 16
766 17.68 wind 1.0 720 > th dose independent rect. 8 17
786 17.68 humidity 70.0 10 > th dose dependent rect. 20 12
815 17.69 wind 1.0 43200 < th dose independent rect. 24 4
817 17.69 temperature 20.0 720 > th dose independent rect. 11 12
827 17.69 radiation 10.0 720 < th dose independent rect. 15 17
828 17.69 precipitation 0.1 270 > th dose independent rect. 21 17
837 17.69 radiation 30.0 30 < th dose dependent sin 7 NA
864 17.69 humidity 70.0 10 > th dose dependent rect. 14 22
898 17.70 humidity 50.0 720 > th dose dependent rect. 20 9
899 17.70 precipitation 0.1 270 > th dose dependent rect. 24 10
918 17.71 wind 1.0 720 > th dose independent sin 5 NA
919 17.71 radiation 10.0 1440 < th dose independent sin 15 NA
934 17.71 humidity 90.0 270 < th dose independent rect. 6 15
972 17.71 radiation 10.0 720 < th dose dependent rect. 24 23