BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0493600 Os06g0493600|AK067110
(828 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0493600 Similar to PHO1-like protein 1459 0.0
Os02g0809800 SPX, N-terminal domain containing protein 558 e-159
Os12g0595000 EXS, C-terminal domain containing protein 111 3e-24
Os01g0110100 Conserved hypothetical protein 98 3e-20
>Os06g0493600 Similar to PHO1-like protein
Length = 828
Score = 1459 bits (3778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 727/828 (87%), Positives = 727/828 (87%)
Query: 1 MVKFSKQFEGQLVPEWKDAFVDYWQLKKDIKRLQXXXXXXXXXXXTTPLSQCQAPVAAAH 60
MVKFSKQFEGQLVPEWKDAFVDYWQLKKDIKRLQ TTPLSQCQAPVAAAH
Sbjct: 1 MVKFSKQFEGQLVPEWKDAFVDYWQLKKDIKRLQAAEAEAAGVAATTPLSQCQAPVAAAH 60
Query: 61 WVMRLPFLXXXXXXXXXXGAIQVHRKLASXXXXXXXAVAGEVYETELVXXXXXXXXXXXX 120
WVMRLPFL GAIQVHRKLAS AVAGEVYETELV
Sbjct: 61 WVMRLPFLHPHGHHHKEHGAIQVHRKLASGGGGGGGAVAGEVYETELVDGGAGFADGEAA 120
Query: 121 XXXXXXLDEQLNKVNRFYERKEAEFVERGESLRRQLQILAELRAAVVAEQQXXXXXXXXX 180
LDEQLNKVNRFYERKEAEFVERGESLRRQLQILAELRAAVVAEQQ
Sbjct: 121 RAFFARLDEQLNKVNRFYERKEAEFVERGESLRRQLQILAELRAAVVAEQQRDGRRRRCG 180
Query: 181 XXXXSSPPDTEDPSVSCSILHGDQSLRGTSEQEQEGQEKLTKDMIARSPDEGDDDQLTIP 240
SSPPDTEDPSVSCSILHGDQSLRGTSEQEQEGQEKLTKDMIARSPDEGDDDQLTIP
Sbjct: 181 NGGDSSPPDTEDPSVSCSILHGDQSLRGTSEQEQEGQEKLTKDMIARSPDEGDDDQLTIP 240
Query: 241 QELGDSGRLGRPREEAANTRPRTTLPGGRAVTCQGRSVRINIPVTTPTRTVTAIRELLFD 300
QELGDSGRLGRPREEAANTRPRTTLPGGRAVTCQGRSVRINIPVTTPTRTVTAIRELLFD
Sbjct: 241 QELGDSGRLGRPREEAANTRPRTTLPGGRAVTCQGRSVRINIPVTTPTRTVTAIRELLFD 300
Query: 301 DMLSQSRRSGSANGTKCGDKLSINKRKVHQAEKMIRGALIELYKGLGYLKTYRSLNMMAF 360
DMLSQSRRSGSANGTKCGDKLSINKRKVHQAEKMIRGALIELYKGLGYLKTYRSLNMMAF
Sbjct: 301 DMLSQSRRSGSANGTKCGDKLSINKRKVHQAEKMIRGALIELYKGLGYLKTYRSLNMMAF 360
Query: 361 VKILKKFDKVTAKEAQSIYLKVVESSYFNVSDKVIRLMDDVDELFVRHFAEGDKRKAMKY 420
VKILKKFDKVTAKEAQSIYLKVVESSYFNVSDKVIRLMDDVDELFVRHFAEGDKRKAMKY
Sbjct: 361 VKILKKFDKVTAKEAQSIYLKVVESSYFNVSDKVIRLMDDVDELFVRHFAEGDKRKAMKY 420
Query: 421 LKPNQREESHXXXXXXXXXXXXXXXXXXXYCIMAHIAGMYTQQSNKVYMATSYPVXXXXX 480
LKPNQREESH YCIMAHIAGMYTQQSNKVYMATSYPV
Sbjct: 421 LKPNQREESHTTTFFIGLFTGGFAALFIGYCIMAHIAGMYTQQSNKVYMATSYPVLSMFS 480
Query: 481 XXXXXXXXYGCNIFMWRKTRINYTFIFEFTPTKELKYRDVFLICTTSMTIVIGVMFAHLT 540
YGCNIFMWRKTRINYTFIFEFTPTKELKYRDVFLICTTSMTIVIGVMFAHLT
Sbjct: 481 LFFLHLFLYGCNIFMWRKTRINYTFIFEFTPTKELKYRDVFLICTTSMTIVIGVMFAHLT 540
Query: 541 LIVKGYSSCAVQAIPGAXXXXXXXXXXCPFNILYRSCRYHFLTVIRNIILTPFYKVVMVD 600
LIVKGYSSCAVQAIPGA CPFNILYRSCRYHFLTVIRNIILTPFYKVVMVD
Sbjct: 541 LIVKGYSSCAVQAIPGALLLVFLLILVCPFNILYRSCRYHFLTVIRNIILTPFYKVVMVD 600
Query: 601 FFMADQLCSQVPLLRSLEYLACYYITSSYKTQDYGYCTRVKHFRDLAYAVSFLPYYWRAM 660
FFMADQLCSQVPLLRSLEYLACYYITSSYKTQDYGYCTRVKHFRDLAYAVSFLPYYWRAM
Sbjct: 601 FFMADQLCSQVPLLRSLEYLACYYITSSYKTQDYGYCTRVKHFRDLAYAVSFLPYYWRAM 660
Query: 661 QCARRWFDEGDINHIVNLGKYVSAMLAAGTKVAYENDNSAGWLSLVVIVSSLATIYQLYW 720
QCARRWFDEGDINHIVNLGKYVSAMLAAGTKVAYENDNSAGWLSLVVIVSSLATIYQLYW
Sbjct: 661 QCARRWFDEGDINHIVNLGKYVSAMLAAGTKVAYENDNSAGWLSLVVIVSSLATIYQLYW 720
Query: 721 DFVKDWGLLQFNSKNPWLRNDLILKQKYIYFLSMGLNLILRLAWLQTVIHPNIGSLDSRV 780
DFVKDWGLLQFNSKNPWLRNDLILKQKYIYFLSMGLNLILRLAWLQTVIHPNIGSLDSRV
Sbjct: 721 DFVKDWGLLQFNSKNPWLRNDLILKQKYIYFLSMGLNLILRLAWLQTVIHPNIGSLDSRV 780
Query: 781 TLFILAALEVIRRGHWNFYRLENEHLNNAGKFRAVKVVPLPFHEVEED 828
TLFILAALEVIRRGHWNFYRLENEHLNNAGKFRAVKVVPLPFHEVEED
Sbjct: 781 TLFILAALEVIRRGHWNFYRLENEHLNNAGKFRAVKVVPLPFHEVEED 828
>Os02g0809800 SPX, N-terminal domain containing protein
Length = 815
Score = 558 bits (1439), Expect = e-159, Method: Compositional matrix adjust.
Identities = 298/709 (42%), Positives = 419/709 (59%), Gaps = 19/709 (2%)
Query: 128 DEQLNKVNRFYERKEAEFVERGESLRRQLQILAELRAAVVAEQQXXXXXXXXXXXXXSSP 187
DE+L KVN FY +EAE + RG++L QL+ILA+++ + P
Sbjct: 118 DEELEKVNAFYTGQEAELLARGDALLEQLRILADVKRILADHAAARRARGLARSRSMPPP 177
Query: 188 PDTEDPSVSCSILHGDQSLRGTSEQEQ--EGQEKLTKDMIARSPDEGDDDQLTIPQE--- 242
P + P S G L G S + +G +L + ++ D+ + +
Sbjct: 178 PPSSSPPSSVHGSSGRYLLSGLSSPQSMSDGSLELQQAQVSEGAAVADEVMAALERNGVS 237
Query: 243 -LGDSGRLGRPREEAANTRPRTTLPGGRAVTCQGRSVRINIPVTTPTRTVTAIRELLFDD 301
+G +G+ ++ + GG V +VRI+IP T+P R + E +
Sbjct: 238 FVGLAGKKDGKTKDGSGKGRGGGGGGGGGVLQLPATVRIDIPATSPGRAALKVWE----E 293
Query: 302 MLSQSRRSGSANGTKCGDKLSINKRKVHQAEKMIRGALIELYKGLGYLKTYRSLNMMAFV 361
+++ R+ G+ ++++K+ AEK IR A + LY+GL LK + SLN+ AF
Sbjct: 294 LVNVLRKDGADPAAAF-----VHRKKIQHAEKNIRDAFMALYRGLELLKKFSSLNVKAFT 348
Query: 362 KILKKFDKVTAKE-AQSIYLKVVESSYFNVSDKVIRLMDDVDELFVRHFAEGDKRKAMKY 420
KILKKF KV+ ++ A ++ + V+ S F+ SDKV++L D+V+ +F++HF D++ AMKY
Sbjct: 349 KILKKFVKVSEQQRATDLFSEKVKRSPFSSSDKVLQLADEVECIFMKHFTGNDRKVAMKY 408
Query: 421 LKPNQREESHXXXXXXXXXXXXXXXXXXXYCIMAHIAGMYTQQSNKVYMATSYPVXXXXX 480
LKP Q +H Y I+AH++G++T N YM Y V
Sbjct: 409 LKPQQPRNTHMITFLVGLFTGTFVSLFIIYAILAHVSGIFTSTGNSAYMEIVYHVFSMFA 468
Query: 481 XXXXXXXXYGCNIFMWRKTRINYTFIFEFTPTKELKYRDVFLICTTSMTIVIGVMFAHLT 540
YGCN+FMW+ TRIN+ FIF+F+ L +RD FL+ + M V+ + +
Sbjct: 469 LISLHIFLYGCNLFMWKNTRINHNFIFDFSSNTALTHRDAFLMSASIMCTVVAALV--IN 526
Query: 541 LIVKGYSSCAVQAIPGAXXXXXXXXXXCPFNILYRSCRYHFLTVIRNIILTPFYKVVMVD 600
L +K A+PGA CPF+I YRS RY F+ V+RNII +PFYKV+M D
Sbjct: 527 LFLKNAGVAYANALPGALLLLSTGVLFCPFDIFYRSTRYCFMRVMRNIIFSPFYKVLMAD 586
Query: 601 FFMADQLCSQVPLLRSLEYLACYYITSSYKTQDYGYCTRVKHFRDLAYAVSFLPYYWRAM 660
FFMADQL SQ+PLLR +E+ ACY++ S++T Y CT + ++ LAY +SFLPY+WRA+
Sbjct: 587 FFMADQLTSQIPLLRHMEFTACYFMAGSFRTHPYETCTSGQQYKHLAYVISFLPYFWRAL 646
Query: 661 QCARRWFDEG-DINHIVNLGKYVSAMLAAGTKVAYENDNSAGWLSLVVIVSSLATIYQLY 719
QC RR+ +EG DIN + N GKYVSAM+AA + Y + W+ +V+I SS ATIYQLY
Sbjct: 647 QCLRRYLEEGHDINQLANAGKYVSAMVAAAVRFKYAATPTPFWVWMVIISSSGATIYQLY 706
Query: 720 WDFVKDWGLLQFNSKNPWLRNDLILKQKYIYFLSMGLNLILRLAWLQTVIHPNIGSLDSR 779
WDFVKDWG L SKN WLRN+LILK K IY++SM LNL LRLAW ++V+ +IG ++SR
Sbjct: 707 WDFVKDWGFLNPKSKNRWLRNELILKNKSIYYVSMMLNLALRLAWTESVMKIHIGKVESR 766
Query: 780 VTLFILAALEVIRRGHWNFYRLENEHLNNAGKFRAVKVVPLPFHEVEED 828
+ F LA+LE+IRRGHWNFYRLENEHLNN GKFRAVK VPLPF E+E D
Sbjct: 767 LLDFSLASLEIIRRGHWNFYRLENEHLNNVGKFRAVKTVPLPFRELETD 815
>Os12g0595000 EXS, C-terminal domain containing protein
Length = 471
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 156/326 (47%), Gaps = 17/326 (5%)
Query: 489 YGCNIFMWRKTRINYTFIFEFTPTKELKYRDVFLICTTSMTIVIGV-MFAHLTLIVKGYS 547
+G N++++ ++ +NY +F+ T L +R+++ C T +T+++ M A+L L G
Sbjct: 122 WGVNLWVFAQSSVNYARVFDLAQT-HLSHREIWR-CATWLTLIVPTSMTAYLYLYSHGEV 179
Query: 548 SCAVQAIPGAXXXXXXXXXXCPFNILYRSCRYHFLTVIRNIILTPFYKVVMVDFFMADQL 607
S A P PF++ Y S R++FL + I+L P + DFF+AD
Sbjct: 180 SLAASQ-PVLLYAILLIVLLSPFDMFYLSSRFYFLRTVWRIML-PLQAITFPDFFLADIF 237
Query: 608 CSQVPLLRSLEYLACYYITSSYKTQDYGYCTRVKHFRDLAYA-VSFLPYYWRAMQCARRW 666
S + LE C + T + + +A V PY R QC R++
Sbjct: 238 TSMSKVFSDLERSVCRMVNRQVATTAWLEADSICGSHSVAIPLVLVFPYLCRLFQCLRQY 297
Query: 667 FDEGDINHIVNLGKYVSAM----LAAGTKVAYENDNSAGWLSLVVIVSSLATIYQLYWDF 722
D + ++N KY +A+ L+A + + + + L ++ S + ++Y YWD
Sbjct: 298 KDTKEKTCLLNALKYSTAVPVIFLSALKYHVFPDKWVSFYRPLWLMSSVINSLYSFYWDI 357
Query: 723 VKDWGLLQ----FNSKNPWLRNDLILKQKYIYFLSMGLNLILRLAWLQTVIHPNIGSLDS 778
+DW L F KNP +L+ Q ++Y+ + NL+LR W + + +
Sbjct: 358 KRDWDLSILTRIFMFKNPSTWTNLLYGQIWVYYWVLASNLVLRCTWTYKL---SAHLRHN 414
Query: 779 RVTLFILAALEVIRRGHWNFYRLENE 804
+T+F +AALE++RR W F+R+ENE
Sbjct: 415 YLTVFTIAALEILRRFQWVFFRVENE 440
>Os01g0110100 Conserved hypothetical protein
Length = 75
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 47/52 (90%)
Query: 610 QVPLLRSLEYLACYYITSSYKTQDYGYCTRVKHFRDLAYAVSFLPYYWRAMQ 661
QVP+LRSLEY+ACYYI+ SY+TQ+YGYC KH RDLAYAVSFLPYYWRAMQ
Sbjct: 2 QVPMLRSLEYVACYYISGSYRTQEYGYCINTKHIRDLAYAVSFLPYYWRAMQ 53
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.136 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 23,326,188
Number of extensions: 862327
Number of successful extensions: 1838
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1824
Number of HSP's successfully gapped: 4
Length of query: 828
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 719
Effective length of database: 11,344,475
Effective search space: 8156677525
Effective search space used: 8156677525
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 160 (66.2 bits)