FiT-DB / Search/ Help/ Sample detail

Os12g0595000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : EXS, C-terminal domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.019) R2 : 0.138
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.34 (0.0399) R2dN8 : 0.178 R2N8 : 0.138
σ : 0.357
deviance : 58.48
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
24.89 0.234 10.3 -0.133 0.411 0.901 -0.0523 -1.74 0.11 5.89 16.12 1977 -- --
26.94 0.242 10.3 0.216 0.352 0.926 0.0051 -- 0.217 5.77 14.4 3306 -- --
24.71 0.231 10.3 -0.135 0.321 0.848 -- -1.49 0.101 5.97 16 2651 -- --
26.93 0.242 10.3 0.213 0.351 0.923 -- -- 0.217 5.74 13.67 3304 -- --
29.74 0.254 10.3 -0.125 -- 0.883 -- -1.44 0.118 -- 15.92 2725 -- --
42.2 0.305 10.2 0.594 0.355 -- 0.0302 -- 0.399 5.27 -- -- -- --
42.2 0.304 10.2 0.594 0.355 -- -- -- 0.399 5.28 -- -- -- --
31.66 0.262 10.3 0.236 -- 0.909 -- -- 0.219 -- 12.99 2741 -- --
27.97 0.246 10.3 -- 0.365 1.01 -- -- 0.186 5.68 10.2 4889 -- --
48.79 0.326 10.2 0.606 -- -- -- -- 0.408 -- -- -- -- --
51.49 0.336 10.2 -- 0.366 -- -- -- 0.333 5.22 -- -- -- --
32.87 0.267 10.3 -- -- 1.01 -- -- 0.174 -- 12.46 2767 -- --
58.48 0.357 10.2 -- -- -- -- -- 0.34 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.26 temperature 10 1440 > th dose dependent rect. 5 4
6 24.36 temperature 30 1440 < th dose dependent rect. 5 4
14 24.42 humidity 90 14400 > th dose dependent rect. 23 2
32 24.52 radiation 1 14400 > th dose independent rect. 18 11
37 24.56 radiation 1 14400 > th dose independent rect. 18 1
61 24.63 radiation 30 14400 > th dose independent rect. 16 16
87 24.75 temperature 15 1440 > th dose dependent rect. 21 13
101 24.81 temperature 30 1440 < th dose dependent rect. 21 13
109 24.83 temperature 15 1440 > th dose dependent sin 7 NA
139 24.88 radiation 30 14400 > th dose independent rect. 7 1
157 24.89 radiation 1 14400 < th dose independent rect. 18 11
240 25.05 temperature 30 1440 < th dose dependent sin 8 NA
260 25.07 radiation 30 14400 > th dose dependent rect. 16 16
290 25.10 radiation 1 14400 < th dose independent rect. 18 9
299 25.11 radiation 1 14400 < th dose independent rect. 18 7
332 25.16 radiation 1 14400 < th dose independent rect. 18 5
338 25.17 radiation 1 14400 < th dose independent rect. 18 1
358 25.20 radiation 1 14400 < th dose independent rect. 18 13
383 25.23 radiation 1 14400 < th dose dependent rect. 18 13
391 25.24 temperature 25 4320 < th dose independent rect. 6 10
445 25.30 radiation 30 4320 < th dose independent rect. 16 16
477 25.33 wind 7 43200 > th dose independent rect. 5 7
489 25.35 wind 7 43200 < th dose independent rect. 5 7
522 25.39 wind 7 43200 > th dose independent rect. 9 3
535 25.40 wind 7 43200 > th dose dependent rect. 9 5
537 25.40 humidity 90 14400 > th dose dependent rect. 21 10
544 25.41 temperature 25 4320 > th dose independent rect. 6 10
584 25.45 wind 7 43200 < th dose independent rect. 9 3
587 25.45 temperature 15 1440 > th dose dependent no NA NA
605 25.46 temperature 15 1440 > th dose dependent rect. 24 23
627 25.48 wind 7 43200 > th dose independent rect. 23 15
641 25.48 radiation 1 14400 < th dose dependent rect. 18 18
649 25.49 radiation 1 14400 < th dose dependent rect. 4 3
657 25.49 radiation 1 14400 < th dose dependent rect. 18 21
666 25.50 temperature 20 4320 > th dose dependent rect. 8 8
675 25.51 wind 7 43200 < th dose independent rect. 7 5
676 25.51 temperature 25 4320 < th dose independent rect. 10 6
686 25.51 wind 7 43200 > th dose dependent rect. 24 15
694 25.51 temperature 15 1440 > th dose dependent rect. 5 23
698 25.52 temperature 25 4320 > th dose independent rect. 11 4
704 25.52 wind 7 43200 > th dose dependent rect. 8 7
714 25.52 wind 7 43200 > th dose dependent rect. 22 17
723 25.53 wind 7 43200 > th dose independent sin 5 NA
727 25.53 wind 7 43200 < th dose independent rect. 23 15
728 25.53 radiation 1 14400 < th dose dependent rect. 18 1
743 25.54 wind 7 43200 < th dose independent rect. 5 2
761 25.55 temperature 25 4320 > th dose independent rect. 10 6
770 25.55 wind 7 43200 > th dose dependent rect. 3 12
778 25.56 wind 7 43200 < th dose independent sin 5 NA
791 25.56 wind 7 43200 > th dose dependent rect. 19 20
807 25.57 radiation 1 14400 < th dose dependent rect. 18 10
815 25.58 radiation 30 4320 < th dose independent rect. 7 1
838 25.59 wind 1 43200 > th dose dependent rect. 10 2
861 25.60 wind 9 43200 < th dose independent rect. 18 21
862 25.60 temperature 20 4320 > th dose dependent rect. 15 1
908 25.62 temperature 30 1440 < th dose dependent rect. 22 1
910 25.62 temperature 20 4320 > th dose dependent rect. 9 4
934 25.63 humidity 90 14400 > th dose dependent sin 11 NA
948 25.63 humidity 90 14400 > th dose dependent rect. 22 15
967 25.64 humidity 90 14400 > th dose dependent rect. 22 13
970 25.64 humidity 90 14400 > th dose dependent rect. 22 17
979 25.65 temperature 10 1440 > th dose dependent rect. 22 1
999 25.66 wind 7 43200 > th dose dependent sin 0 NA