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Os01g0110100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.09 (0.0531) R2 : 0.673
β1 : 2.58 (0.194) R2dD : 0.129 R2D : 0.0797
β2 : 0.888 (0.138) R2dC : 0.0322 R2C : 0.0328
β3 : -3.93 (0.146) R2dE : 0.525 R2E : 0.503
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.543 (0.113) R2dN8 : 0.0219 R2N8 : 0.00353
σ : 0.992
deviance : 453.38
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_____
C
peak time of C : 6.81
E
wheather : humidity
threshold : 55.62
memory length : 565
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 18.7
open length of G : 2.92

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
450.6 0.997 8.08 2.94 1.25 -3.06 -4.37 -5.3 0.652 11.1 63.06 606 17.6 3.27
453.83 0.992 8.08 2.64 1.02 -3.61 -1.39 -- 0.598 7.35 53.06 563 18.6 2.93
457.54 0.996 8.05 2.38 0.94 -3.71 -- -0.528 0.462 8.19 57.52 569 18.6 2.92
453.38 0.992 8.09 2.58 0.888 -3.93 -- -- 0.543 6.81 55.62 565 18.7 2.92
484.43 1.03 8.13 2.57 -- -4.05 -- -0.251 0.579 -- 52.45 567 18.1 3.13
621.64 1.17 8.04 2.45 3.11 -- -0.339 -- 0.636 11.7 -- -- -- --
622.14 1.17 8.04 2.44 3.11 -- -- -- 0.635 11.7 -- -- -- --
484.48 1.03 8.13 2.54 -- -4.06 -- -- 0.581 -- 52.54 565 18.1 3.19
624.08 1.16 8.17 -- 0.999 -3.89 -- -- 0.204 6.61 56.16 551 18.8 3.02
1230.19 1.64 8.11 2.35 -- -- -- -- 0.596 -- -- -- -- --
779.13 1.31 8.11 -- 3.08 -- -- -- 0.363 11.7 -- -- -- --
653.58 1.19 8.18 -- -- -3.86 -- -- 0.312 -- 46.93 557 18.1 3.18
1375.93 1.73 8.17 -- -- -- -- -- 0.336 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 476.96 humidity 60.0 720 > th dose dependent rect. 16 5
9 483.93 wind 3.0 43200 > th dose dependent rect. 11 1
11 484.29 humidity 80.0 43200 > th dose independent rect. 3 12
22 486.92 humidity 90.0 720 > th dose dependent sin 20 NA
30 488.63 wind 7.0 43200 > th dose independent rect. 11 1
33 488.88 humidity 80.0 43200 < th dose independent rect. 2 14
37 489.67 wind 9.0 43200 < th dose dependent rect. 11 1
41 490.13 humidity 90.0 720 > th dose independent sin 20 NA
42 490.16 wind 7.0 43200 < th dose independent rect. 11 1
44 490.48 humidity 70.0 43200 > th dose dependent rect. 8 20
46 490.63 humidity 80.0 43200 < th dose independent rect. 3 12
48 490.77 humidity 80.0 720 > th dose independent rect. 16 5
49 490.92 humidity 80.0 43200 > th dose independent sin 3 NA
51 490.97 precipitation 0.1 43200 > th dose dependent rect. 13 1
54 491.15 humidity 80.0 43200 < th dose independent rect. 1 16
59 491.46 humidity 90.0 720 < th dose dependent sin 15 NA
61 491.53 humidity 70.0 43200 > th dose dependent rect. 24 16
62 491.64 wind 7.0 43200 > th dose dependent rect. 11 1
64 491.78 humidity 90.0 720 > th dose dependent rect. 9 12
67 491.93 humidity 70.0 43200 > th dose dependent rect. 23 18
69 492.18 humidity 70.0 43200 > th dose dependent rect. 22 21
71 492.37 wind 9.0 43200 > th dose independent rect. 14 1
72 492.37 humidity 70.0 720 > th dose independent rect. 16 3
88 493.02 radiation 1.0 720 < th dose dependent rect. 5 14
99 493.56 radiation 1.0 1440 < th dose dependent sin 0 NA
106 494.17 humidity 80.0 43200 > th dose dependent rect. 12 1
110 494.35 humidity 90.0 720 > th dose dependent rect. 15 5
115 494.57 humidity 50.0 270 > th dose dependent rect. 18 9
124 495.12 wind 3.0 43200 < th dose independent rect. 3 1
130 495.24 wind 3.0 43200 > th dose dependent rect. 5 2
136 495.46 temperature 20.0 270 > th dose independent rect. 19 8
138 495.57 humidity 90.0 720 > th dose dependent rect. 11 10
142 495.69 humidity 80.0 14400 > th dose independent rect. 15 4
143 495.74 wind 3.0 43200 > th dose independent rect. 3 7
148 495.90 humidity 90.0 720 > th dose dependent rect. 13 8
164 496.25 humidity 80.0 43200 < th dose independent sin 3 NA
170 496.51 wind 3.0 43200 > th dose independent rect. 3 4
171 496.52 humidity 90.0 720 < th dose dependent rect. 14 18
178 496.76 humidity 80.0 43200 < th dose independent rect. 24 18
180 496.81 humidity 90.0 720 > th dose independent rect. 9 14
182 496.87 wind 3.0 43200 > th dose independent rect. 3 1
183 496.90 wind 3.0 43200 < th dose dependent rect. 1 3
189 496.94 humidity 90.0 720 < th dose dependent rect. 14 11
194 497.07 humidity 90.0 720 > th dose independent rect. 9 12
199 497.19 humidity 80.0 43200 > th dose dependent rect. 20 5
200 497.22 wind 1.0 43200 < th dose dependent rect. 18 12
201 497.23 humidity 80.0 14400 > th dose independent rect. 13 7
203 497.25 radiation 1.0 43200 < th dose dependent rect. 8 5
212 497.32 wind 9.0 43200 > th dose dependent rect. 14 1
214 497.35 wind 3.0 43200 < th dose independent rect. 3 7
223 497.58 humidity 60.0 720 > th dose dependent sin 19 NA
226 497.62 wind 1.0 14400 < th dose dependent rect. 4 2
234 497.70 precipitation 0.1 14400 > th dose dependent rect. 8 6
239 497.77 radiation 1.0 43200 < th dose independent rect. 8 5
250 497.93 radiation 1.0 1440 < th dose dependent rect. 5 23
255 498.00 humidity 70.0 43200 > th dose dependent no NA NA
258 498.02 radiation 1.0 43200 > th dose independent rect. 8 5
266 498.08 humidity 70.0 43200 > th dose dependent rect. 2 23
273 498.16 humidity 80.0 14400 < th dose independent rect. 15 3
275 498.21 radiation 1.0 1440 < th dose dependent rect. 5 19
277 498.24 humidity 80.0 14400 < th dose independent rect. 14 5
280 498.25 radiation 1.0 1440 < th dose dependent rect. 21 22
286 498.31 wind 3.0 43200 > th dose independent rect. 24 10
305 498.45 radiation 1.0 1440 < th dose dependent rect. 1 23
308 498.47 radiation 1.0 1440 < th dose dependent rect. 1 18
310 498.48 radiation 1.0 1440 < th dose dependent no NA NA
314 498.50 radiation 1.0 1440 < th dose dependent rect. 12 23
325 498.61 wind 1.0 43200 < th dose dependent rect. 20 10
349 498.75 humidity 70.0 43200 > th dose dependent sin 4 NA
358 498.80 humidity 70.0 43200 > th dose dependent rect. 17 23
379 499.05 wind 3.0 43200 < th dose independent rect. 24 10
385 499.08 radiation 1.0 43200 < th dose independent rect. 9 3
392 499.16 radiation 1.0 1440 < th dose dependent rect. 9 23
400 499.25 wind 3.0 43200 > th dose dependent rect. 5 9
422 499.46 humidity 90.0 720 > th dose independent rect. 11 10
430 499.58 wind 9.0 14400 < th dose dependent rect. 2 2
431 499.59 precipitation 0.1 43200 > th dose independent rect. 13 1
436 499.61 wind 1.0 43200 < th dose dependent rect. 23 6
463 499.87 humidity 90.0 720 > th dose independent rect. 6 17
467 499.93 humidity 80.0 43200 > th dose dependent rect. 17 11
468 499.94 wind 1.0 14400 > th dose dependent rect. 2 2
472 499.98 wind 1.0 43200 < th dose independent rect. 14 5
501 500.30 humidity 80.0 43200 > th dose dependent rect. 16 13
503 500.31 humidity 70.0 43200 > th dose dependent sin 17 NA
507 500.33 precipitation 0.1 14400 > th dose independent rect. 9 5
511 500.34 wind 1.0 43200 < th dose dependent rect. 22 8
512 500.34 humidity 80.0 43200 > th dose dependent rect. 19 8
531 500.57 wind 1.0 43200 < th dose independent rect. 16 3
532 500.57 wind 1.0 43200 > th dose independent rect. 16 4
550 500.75 precipitation 0.1 43200 < th dose independent rect. 13 1
551 500.75 precipitation 0.1 43200 < th dose dependent rect. 13 1
563 500.84 temperature 30.0 14400 < th dose independent rect. 15 1
566 500.86 temperature 30.0 14400 > th dose independent rect. 15 1
587 501.23 humidity 80.0 43200 > th dose dependent rect. 21 3
595 501.31 wind 1.0 43200 > th dose independent rect. 14 5
620 501.60 humidity 70.0 43200 > th dose dependent rect. 13 23
624 501.67 precipitation 0.1 14400 > th dose independent rect. 9 7
641 501.82 radiation 10.0 43200 < th dose independent rect. 17 13
646 501.85 wind 1.0 43200 > th dose dependent rect. 2 8
668 502.03 wind 1.0 43200 > th dose dependent rect. 24 13
670 502.06 humidity 80.0 43200 > th dose independent rect. 12 1
687 502.23 humidity 80.0 720 > th dose independent rect. 19 1
699 502.34 humidity 80.0 43200 > th dose dependent sin 13 NA
719 502.60 wind 3.0 43200 > th dose independent rect. 6 3
737 502.73 precipitation 0.1 43200 < th dose independent rect. 19 2
738 502.73 precipitation 0.1 43200 < th dose dependent rect. 19 2
746 502.80 wind 9.0 43200 < th dose dependent rect. 2 11
762 502.91 wind 9.0 14400 > th dose dependent rect. 6 5
777 503.04 humidity 60.0 14400 > th dose dependent rect. 16 1
781 503.07 wind 5.0 43200 < th dose dependent rect. 2 8
782 503.09 humidity 60.0 720 > th dose dependent rect. 10 13
801 503.25 temperature 30.0 720 < th dose independent rect. 15 13
819 503.37 humidity 90.0 720 > th dose dependent rect. 8 17
853 503.60 radiation 10.0 43200 < th dose independent rect. 17 5
869 503.70 radiation 10.0 43200 < th dose independent rect. 17 8
877 503.74 humidity 90.0 43200 < th dose independent rect. 10 1
899 503.90 wind 9.0 43200 < th dose independent rect. 14 1
911 504.01 wind 7.0 43200 > th dose independent rect. 5 9
922 504.08 temperature 30.0 720 < th dose independent rect. 16 11
930 504.14 precipitation 0.1 43200 > th dose independent rect. 19 2
931 504.15 wind 7.0 43200 < th dose independent rect. 5 9
935 504.18 radiation 1.0 270 < th dose dependent rect. 5 22
939 504.24 humidity 90.0 43200 < th dose independent rect. 21 8
945 504.27 wind 1.0 43200 < th dose dependent rect. 13 6
949 504.30 temperature 20.0 43200 < th dose dependent rect. 21 1
956 504.35 precipitation 0.1 14400 < th dose independent rect. 9 7
958 504.35 precipitation 0.1 14400 < th dose dependent rect. 9 7
963 504.41 radiation 1.0 43200 > th dose independent rect. 4 1
973 504.41 radiation 1.0 43200 > th dose dependent rect. 4 1