BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0313900 Os06g0313900|AK064443
(501 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0313900 Protein of unknown function DUF827, plant fami... 915 0.0
Os03g0395300 Protein of unknown function DUF827, plant fami... 217 2e-56
Os07g0619100 Protein of unknown function DUF827, plant fami... 216 3e-56
Os09g0458000 Protein of unknown function DUF827, plant fami... 139 6e-33
>Os06g0313900 Protein of unknown function DUF827, plant family protein
Length = 501
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/501 (92%), Positives = 462/501 (92%)
Query: 1 MLVKDESGKVQENYETLLIERDISIGKAQLAVSMSEGAVRKVEELTVELNRLKVELELAH 60
MLVKDESGKVQENYETLLIERDISIGKAQLAVSMSEGAVRKVEELTVELNRLKVELELAH
Sbjct: 1 MLVKDESGKVQENYETLLIERDISIGKAQLAVSMSEGAVRKVEELTVELNRLKVELELAH 60
Query: 61 STCHDAEKHSKDTSLACDEDSLKWKSDLRQAEEELNQLAKKISSIEELKSTLDTSTGLLL 120
STCHDAEKHSKDTSLACDEDSLKWKSDLRQAEEELNQLAKKISSIEELKSTLDTSTGLLL
Sbjct: 61 STCHDAEKHSKDTSLACDEDSLKWKSDLRQAEEELNQLAKKISSIEELKSTLDTSTGLLL 120
Query: 121 KLKNELAGYVEAKPIDKEAQGNITQRSLHNEVILSTRELEECLMSVDKVRDEVCALNVAA 180
KLKNELAGYVEAKPIDKEAQGNITQRSLHNEVILSTRELEECLMSVDKVRDEVCALNVAA
Sbjct: 121 KLKNELAGYVEAKPIDKEAQGNITQRSLHNEVILSTRELEECLMSVDKVRDEVCALNVAA 180
Query: 181 ASLKTELIKEKTALATMKQMEATSSIAAASLRVEIQLALRELEAVQAKEKESRNGMLGLQ 240
ASLKTELIKEKTALATMKQMEATSSIAAASLRVEIQLALRELEAVQAKEKESRNGMLGLQ
Sbjct: 181 ASLKTELIKEKTALATMKQMEATSSIAAASLRVEIQLALRELEAVQAKEKESRNGMLGLQ 240
Query: 241 KIMEDTAKEADESKSIAREAQEKLRKAKEDMDHAKSCLDTMEFRIQAVLKEMEATKESMR 300
KIMEDTAKEADESKSIAREAQEKLRKAKEDMDHAKSCLDTMEFRIQAVLKEMEATKESMR
Sbjct: 241 KIMEDTAKEADESKSIAREAQEKLRKAKEDMDHAKSCLDTMEFRIQAVLKEMEATKESMR 300
Query: 301 LAIDALRPFDSELPVDIEEQGSQIVTVDLDEYQSLIAKSSKAEELVHERTASAIAQAKIA 360
LAIDALRPFDSELPVDIEEQGSQIVTVDLDEYQSLIAKSSKAEELVHERTASAIAQAKIA
Sbjct: 301 LAIDALRPFDSELPVDIEEQGSQIVTVDLDEYQSLIAKSSKAEELVHERTASAIAQAKIA 360
Query: 361 KXXXXXXXXXXXXXHKVLEQRKQALVAATERADRATEGKLAMEQELRKWREENEQRRKAG 420
K HKVLEQRKQALVAATERADRATEGKLAMEQELRKWREENEQRRKAG
Sbjct: 361 KESESRTLSTLSETHKVLEQRKQALVAATERADRATEGKLAMEQELRKWREENEQRRKAG 420
Query: 421 EALKSQLNPSSTPVIIVERXXXXXXXXXXXXYASVHPLLDMSARSTPNDXXXXXXXXXXX 480
EALKSQLNPSSTPVIIVER YASVHPLLDMSARSTPND
Sbjct: 421 EALKSQLNPSSTPVIIVERSSDTKSTSKDDSYASVHPLLDMSARSTPNDSALLSNKKKRK 480
Query: 481 XXXFFPRITMFFTRKKSRAAI 501
FFPRITMFFTRKKSRAAI
Sbjct: 481 KLSFFPRITMFFTRKKSRAAI 501
>Os03g0395300 Protein of unknown function DUF827, plant family protein
Length = 776
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 186/504 (36%), Positives = 276/504 (54%), Gaps = 21/504 (4%)
Query: 2 LVKDESGKVQENYETLLIERDISIGKAQLAVSMSEGAVRKVEELTVELNRLKVELELAHS 61
LVK+E E + L ERDI+ +A+ A+S ++ ++VEELT+EL +K LE AH+
Sbjct: 281 LVKEEMRSTHEKHTVLASERDIAAKRAEQAISAAKETEKRVEELTLELIAIKESLESAHA 340
Query: 62 TCHDAEKHSKDTSLACDEDSLKWKSDLRQAEEELNQLAKKISSIEELKSTLDTSTGLLLK 121
H+AE+H +LA ++D L W+ +L+QA+EEL QL ++ S + KS +D +T +L
Sbjct: 341 AHHEAEEHKLGAALAKEQDCLAWEKELQQAQEELQQLNMQLVSKTDAKSKIDENTHMLQI 400
Query: 122 LKNELAGYVEAKPIDKEAQGNITQ----------RSLHNEVILSTRELEECLMSVDKVRD 171
L ELA Y E K + +EA G I + RS+ + + +ELE +++K +D
Sbjct: 401 LSKELAAYTENK-MSEEA-GVIEEDGSDEAKEISRSIKRALASTRKELEGVRGNIEKAKD 458
Query: 172 EVCALNVAAASLKTELIKEKTALATMKQMEATSSIAAASLRVEIQLALRELEAVQAKEKE 231
E + A S+K+E+ KEK +L T++Q E +SIA +SL E+ E+E V KE E
Sbjct: 459 ETNLIRAIAESIKSEVDKEKASLVTLQQREGMASIAVSSLEAELNRTKEEIEMVYIKEAE 518
Query: 232 SRNGMLGLQKIMEDTAKEADESKSIAREAQEKLRKAKEDMDHAKSCLDTMEFRIQAVLKE 291
+R M L K+++ A+EA+++K AQE+LRKAKE+ + K+ T E R++AVLKE
Sbjct: 519 TREKMAELPKMLQQAAQEAEDAKVAPHSAQEELRKAKEEAEQTKAAAATAEIRLRAVLKE 578
Query: 292 MEATKESMRLAIDALRPFDSELPVDIEEQGSQIVTVDLDEYQSLIAKSSKAEELVHERTA 351
+EA+K S +LA+ A + E + +T+ + EY SL + +AEEL +ER A
Sbjct: 579 IEASKASEKLALVAAQALQESEETSSVEDSPRTITLPISEYHSLSKRVYEAEELANERVA 638
Query: 352 SAIAQAKIAKXXXXXXXXXXXXXHKVLEQRKQALVAATERADRATEGKLAMEQELRKWRE 411
+A+AQ ++AK K + ++K AL A +RADRA EGKL EQELRKWR
Sbjct: 639 AALAQIELAKESETRTLERLQQETKEMHKKKDALQIALQRADRAKEGKLGAEQELRKWRA 698
Query: 412 ENEQRRKAGEALKSQLNPSSTPVIIVERXXXXXXXXXXXXYASVHPLLDMSARSTPNDXX 471
E EQRRKA K NP + P I R P MS ST +
Sbjct: 699 ELEQRRKAA---KHVANPWTAPPI---RSPEQKGSYKEDDAVLTEPNSPMSNSSTDD--- 749
Query: 472 XXXXXXXXXXXXFFPRITMFFTRK 495
FFP+++ +RK
Sbjct: 750 FVVDQKLRKKKTFFPQMSSILSRK 773
>Os07g0619100 Protein of unknown function DUF827, plant family protein
Length = 817
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 284/504 (56%), Gaps = 29/504 (5%)
Query: 3 VKDESGKVQENYETLLIERDISIGKAQLAVSMSEGAVRKVEELTVELNRLKVELELAHST 62
VK+E V E Y TL+ ERD +I +++ +S+ + ++VEELT+EL K LELAH+
Sbjct: 329 VKEELKTVHEQYVTLINERDTAIKRSEEVISVGKDIEKRVEELTLELIASKGSLELAHAA 388
Query: 63 CHDAEKHSKDTSLACDEDSLKWKSDLRQAEEELNQLAKKISSIEELKSTLDTSTGLLLKL 122
H+AE+ +L +ED + W +L+QA+EEL QL K+ S ++K LDT+ L L
Sbjct: 389 HHEAEERRIGAALEKEEDCVAWDRELQQAQEELQQLNNKLLSKSDVKQNLDTNLRRLRSL 448
Query: 123 KNELAGYVEAKPIDKEAQGNITQRSLHNEVILST----------RELEECLMSVDKVRDE 172
K+ELA YV+ I +EA+G + + + +S +ELEE +++K ++E
Sbjct: 449 KSELATYVQ-NVISEEAEGLVKEHGPDDAQQISGPVKEALASAQKELEEVRANIEKAKNE 507
Query: 173 VCALNVAAASLKTELIKEKTALATMKQMEATSSIAAASLRVEIQLALRELEAVQAKEKES 232
+AA +L++E+ EK++L ++Q E +SIA +L E+ +E+E V++KE+++
Sbjct: 508 AKLFKLAATTLRSEMDNEKSSLVELQQREGMASIAICALEAELNRTKQEIEYVKSKEEDA 567
Query: 233 RNGMLGLQKIMEDTAKEADESKSIAREAQEKLRKAKEDMDHAKSCLDTMEFRIQAVLKEM 292
+ M+ L +I+++ A+EA+++K +A QE++RKA+E+ + K+ T+ R+ AVLKE+
Sbjct: 568 QERMVELPRILQEAAQEAEDAKMVAFSVQEQVRKAREETEKTKTAAATVNTRLSAVLKEI 627
Query: 293 EATKESMRLAIDALRPFDSELPVDIEEQGSQIVTVDLDEYQSLIAKSSKAEELVHERTAS 352
+A+K S +LA A++ +E + VT+ L EY +L K +AE+L HE
Sbjct: 628 DASKASKKLAFAAVQALQESEEAGDDENSPRGVTLPLSEYYTLSKKVHEAEQLAHESVTE 687
Query: 353 AIAQAKIAKXXXXXXXXXXXXXHKVLEQRKQALVAATERADRATEGKLAMEQELRKWREE 412
A+AQ + AK K + ++K+AL A ERA+RA +GKL EQELRKWR +
Sbjct: 688 ALAQVESAKASESNSLERLCEASKRMNEKKEALERALERAERANQGKLTAEQELRKWRAD 747
Query: 413 NEQRRKAGEALKSQLNP-SSTPVIIVERXXXXXXXXXXXXYASVHPLLDMSARSTPNDXX 471
+EQRRKA EA K +NP SS+P IVE+ Y + P + + +
Sbjct: 748 HEQRRKAQEAAKRAVNPLSSSPKRIVEQKDSFYKEFSGNSYEDLVPNRKLRRKKS----- 802
Query: 472 XXXXXXXXXXXXFFPRITMFFTRK 495
FFP + +RK
Sbjct: 803 ------------FFPLMGSLLSRK 814
>Os09g0458000 Protein of unknown function DUF827, plant family protein
Length = 835
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 134/512 (26%), Positives = 262/512 (51%), Gaps = 39/512 (7%)
Query: 3 VKDESGKVQENYETLLIERDISIGKAQLAVSMSEGAVRKVEELTVELNRLKVELELAHST 62
VK E ++Q+ Y +L+ +RD + KA+ A+ S+ + V++LT+++ +K + + +
Sbjct: 343 VKMELDQLQKEYTSLISQRDNTETKARKAIVASQEIEKVVQDLTIKVITMKDLITTSQAN 402
Query: 63 CHDAEKHSKDTSLACDEDSLKWKSDLRQAEEELNQLAKKISSIEELKSTLDTSTGLLLKL 122
AE + +LA +D + W+++L+Q ++E+ +L +S ++L+S L T++ L+ L
Sbjct: 403 HVIAEGKKINAALAYQQDMVNWQNELKQIDDEVQKLNDDLSLNKDLESKLQTASMWLMNL 462
Query: 123 KNELAGYVEAKPIDKEAQGNITQRSLHNEVIL------STRELEECLMSVDKVRDEVCAL 176
++E +V+ ++ +R + +I+ + +ELE + +DK +D+V +L
Sbjct: 463 RDEFKAHVDGTLPKVPSEAREEERPM---IIVCAKLARTRKELENMRIDIDKAKDDVKSL 519
Query: 177 NVAAASLKTELIKEKTALATMKQMEATSSIAAASLRVEIQLALRELEAVQAKEKESRNGM 236
AAA+L+ + EKT +A+++Q E + +A +L+ E+ EL V+ + K ++
Sbjct: 520 WNAAATLQANVEMEKTNIASLRQKENLAFESALALQEELSKIAFELSMVEERTKAAK--- 576
Query: 237 LGLQKIMEDTAKEADESKSIAREAQEKLRKAKEDMDHAKSCLDTMEFRIQAVLKEMEATK 296
+ L+ ++ K+ + +K A A+ ++ KA+E+ D A++ ++ ++ RI+A L+E+ A
Sbjct: 577 MPLE--LQQATKKLEHAKLNAVFARNEMEKAREEADQAQAEVNVVQLRIEATLREILAVN 634
Query: 297 ESMRLAI---DALRPFDSELPVD-IEEQGSQIVTVDLDEYQSLIAKSSKAEELVHERTAS 352
S +A+ +AL+ + E+ ++ + + + VT+ L+EY L K AE+ ++
Sbjct: 635 ASREIAVASANALQDYKQEIELEPLANRKNNNVTLSLEEYNVLCKKVQDAEDSAKKQVIR 694
Query: 353 AIAQAKIAKXXXXXXXXXXXXXHKVLEQRKQALVAATERADRATEGKLAMEQELRKWREE 412
AI + K AK K ++ R+ AL A E+A+ A +GKLAME ELRK R
Sbjct: 695 AIEKIKKAKDAEVRSLDRLDQLIKQIDDRRVALREAHEKANVACDGKLAMENELRKRRAH 754
Query: 413 NEQRRKAGEALKSQLNPSSTPVIIVERXXXXXXXXXXXXYASVHP-----LLDMSARSTP 467
+E++R GE S P+ + ++ +P LL +
Sbjct: 755 HEKQRNTGEV--------SLPIAQISNVKNTSTSFDAVGSSNSNPYKYRMLLPRA----- 801
Query: 468 NDXXXXXXXXXXXXXXFFPR--ITMFFTRKKS 497
D FFPR + MF R+K+
Sbjct: 802 -DTIATTIAESRPRKSFFPRSLVAMFMFRRKT 832
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.310 0.124 0.319
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,092,626
Number of extensions: 418710
Number of successful extensions: 2397
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 2369
Number of HSP's successfully gapped: 8
Length of query: 501
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 396
Effective length of database: 11,553,331
Effective search space: 4575119076
Effective search space used: 4575119076
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 158 (65.5 bits)