Os07g0619100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF827, plant family protein.
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Os07g0619100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF827, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.59 | 0.366 | 11 | -0.627 | 0.455 | -2.15 | -0.299 | 2.6 | -0.389 | 18.7 | 0.5 | 300 | -- | -- |
| 60.79 | 0.363 | 11 | -0.657 | 0.462 | -1.43 | -0.29 | -- | -0.38 | 18.7 | 0.4609 | 299 | -- | -- |
| 60.81 | 0.363 | 11 | -0.621 | 0.454 | -2.17 | -- | 2.58 | -0.388 | 18.8 | 0.5 | 299 | -- | -- |
| 61.03 | 0.364 | 11 | -0.649 | 0.457 | -1.45 | -- | -- | -0.386 | 18.8 | 0.4077 | 299 | -- | -- |
| 71.54 | 0.394 | 11 | -0.62 | -- | -2.18 | -- | 3 | -0.388 | -- | 0.4897 | 299 | -- | -- |
| 67.87 | 0.386 | 11 | -0.765 | 0.431 | -- | -0.543 | -- | -0.359 | 18.5 | -- | -- | -- | -- |
| 68.61 | 0.388 | 11 | -0.757 | 0.428 | -- | -- | -- | -0.361 | 18.6 | -- | -- | -- | -- |
| 71.65 | 0.394 | 11 | -0.664 | -- | -1.23 | -- | -- | -0.378 | -- | 0.5 | 421 | -- | -- |
| 71.25 | 0.393 | 11 | -- | 0.463 | -1.64 | -- | -- | -0.329 | 18.9 | 0.2011 | 407 | -- | -- |
| 78.17 | 0.413 | 11 | -0.768 | -- | -- | -- | -- | -0.37 | -- | -- | -- | -- | -- |
| 83.72 | 0.428 | 11 | -- | 0.438 | -- | -- | -- | -0.277 | 18.5 | -- | -- | -- | -- |
| 82.18 | 0.422 | 11 | -- | -- | -1.45 | -- | -- | -0.339 | -- | 0.2973 | 518 | -- | -- |
| 93.71 | 0.452 | 11 | -- | -- | -- | -- | -- | -0.285 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.62 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 2 | 57.71 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 5 | 59.08 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 6 | 59.14 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 24 | 21 |
| 8 | 59.33 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 10 | 59.35 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 11 | 59.37 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 15 | 59.45 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 7 | 14 |
| 18 | 59.51 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 7 | 22 |
| 23 | 59.58 | humidity | 80.0 | 720 | > th | dose independent | rect. | 7 | 14 |
| 24 | 59.61 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 25 | 59.61 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 26 | 59.62 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 29 | 59.66 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 41 | 59.76 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 49 | 59.83 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 50 | 59.83 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 6 |
| 54 | 59.84 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 4 |
| 79 | 59.94 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 12 | 23 |
| 81 | 59.94 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 12 | 23 |
| 84 | 59.97 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 99 | 60.07 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 114 | 60.11 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 116 | 60.12 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 9 |
| 118 | 60.13 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 125 | 60.17 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 128 | 60.17 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 11 |
| 133 | 60.19 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 13 |
| 151 | 60.26 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 5 |
| 155 | 60.26 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 162 | 60.29 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 170 | 60.31 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 173 | 60.32 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 176 | 60.33 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 187 | 60.36 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 188 | 60.36 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 191 | 60.36 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 192 | 60.36 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 4 |
| 196 | 60.37 | wind | 7.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 200 | 60.37 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 21 |
| 210 | 60.39 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 218 | 60.40 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 227 | 60.42 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 21 |
| 241 | 60.44 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 20 |
| 268 | 60.48 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 4 |
| 273 | 60.49 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 12 | 21 |
| 275 | 60.49 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 12 | 21 |
| 288 | 60.51 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 296 | 60.52 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 21 |
| 299 | 60.52 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 5 | 12 |
| 303 | 60.53 | wind | 1.0 | 14400 | < th | dose independent | rect. | 12 | 18 |
| 316 | 60.55 | humidity | 80.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 319 | 60.55 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 320 | 60.55 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 2 | 15 |
| 322 | 60.56 | humidity | 80.0 | 1440 | < th | dose independent | sin | 1 | NA |
| 327 | 60.56 | humidity | 80.0 | 720 | > th | dose independent | rect. | 24 | 21 |
| 346 | 60.59 | wind | 1.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 361 | 60.60 | humidity | 50.0 | 720 | > th | dose dependent | sin | 23 | NA |
| 367 | 60.61 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 403 | 60.66 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 410 | 60.66 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 12 | 18 |
| 416 | 60.68 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 428 | 60.69 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 5 | 14 |
| 454 | 60.72 | precipitation | 0.1 | 720 | > th | dose dependent | sin | 1 | NA |
| 457 | 60.72 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 12 | 21 |
| 460 | 60.73 | wind | 1.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 461 | 60.73 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 13 | 5 |
| 472 | 60.74 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 7 | 11 |
| 474 | 60.74 | wind | 1.0 | 14400 | > th | dose independent | rect. | 11 | 19 |
| 475 | 60.74 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 488 | 60.76 | wind | 5.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 492 | 60.76 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 21 | 22 |
| 525 | 60.79 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 19 | 23 |
| 546 | 60.80 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 559 | 60.82 | wind | 1.0 | 14400 | > th | dose independent | rect. | 23 | 11 |
| 561 | 60.82 | wind | 1.0 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 569 | 60.83 | precipitation | 0.1 | 270 | > th | dose independent | sin | 1 | NA |
| 589 | 60.84 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 15 |
| 600 | 60.85 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 615 | 60.87 | precipitation | 0.1 | 720 | < th | dose independent | sin | 0 | NA |
| 622 | 60.87 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 0 | NA |
| 627 | 60.87 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 18 | 16 |
| 633 | 60.88 | wind | 1.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 639 | 60.88 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 13 | 6 |
| 654 | 60.89 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 21 |
| 659 | 60.90 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 10 | 18 |
| 660 | 60.90 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 6 | 22 |
| 661 | 60.90 | humidity | 90.0 | 720 | < th | dose dependent | sin | 1 | NA |
| 695 | 60.92 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 19 |
| 696 | 60.92 | wind | 1.0 | 14400 | > th | dose independent | rect. | 17 | 20 |
| 707 | 60.93 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 710 | 60.94 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 712 | 60.94 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 13 |
| 721 | 60.94 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 4 |
| 724 | 60.94 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 725 | 60.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 730 | 60.95 | wind | 1.0 | 14400 | > th | dose independent | rect. | 23 | 15 |
| 738 | 60.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 746 | 60.96 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 755 | 60.96 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 779 | 60.97 | humidity | 50.0 | 720 | > th | dose dependent | no | NA | NA |
| 827 | 61.00 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 17 |
| 829 | 61.00 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 19 | 18 |
| 833 | 61.00 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 834 | 61.00 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 4 |
| 841 | 61.01 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 22 |
| 845 | 61.01 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 9 | 9 |
| 863 | 61.02 | wind | 1.0 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 865 | 61.02 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 19 | 18 |
| 870 | 61.02 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 2 | 3 |
| 873 | 61.02 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 21 |
| 882 | 61.03 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 15 |
| 884 | 61.03 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 15 |
| 894 | 61.03 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 913 | 61.04 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 921 | 61.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 8 |
| 929 | 61.04 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 7 | 12 |
| 933 | 61.04 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 5 | 14 |
| 943 | 61.05 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 973 | 61.06 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 985 | 61.06 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 22 | 15 |
| 997 | 61.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 11 |