Os09g0458000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF827, plant family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0458000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF827, plant family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 191.11 | 0.65 | 2.9 | -0.166 | 0.0882 | 4.27 | -0.58 | -6.23 | -0.095 | 6.08 | 90.34 | 82 | 8.05 | 0.882 |
| 193.6 | 0.648 | 2.89 | -0.125 | 0.0877 | 3.23 | -0.516 | -- | -0.0707 | 4.96 | 91 | 72 | 8.05 | 0.833 |
| 191.88 | 0.645 | 2.9 | -0.166 | 0.0851 | 4.05 | -- | -5.59 | -0.0931 | 6.61 | 90.31 | 82 | 8.05 | 0.867 |
| 194.17 | 0.649 | 2.89 | -0.157 | 0.0865 | 3.04 | -- | -- | -0.0954 | 6.58 | 90.89 | 77 | 8.02 | 0.8 |
| 192.24 | 0.646 | 2.9 | -0.162 | -- | 3.9 | -- | -5.01 | -0.0908 | -- | 90.32 | 82 | 8.05 | 0.857 |
| 220.91 | 0.697 | 2.9 | -0.115 | 0.142 | -- | -0.478 | -- | -0.119 | 6.86 | -- | -- | -- | -- |
| 221.38 | 0.697 | 2.9 | -0.122 | 0.146 | -- | -- | -- | -0.117 | 8.03 | -- | -- | -- | -- |
| 194.56 | 0.65 | 2.89 | -0.155 | -- | 3.07 | -- | -- | -0.0933 | -- | 90.82 | 77 | 8.04 | 0.782 |
| 194.82 | 0.65 | 2.89 | -- | 0.0848 | 3.03 | -- | -- | -0.078 | 6.71 | 90.65 | 81 | 8.05 | 0.788 |
| 222.54 | 0.697 | 2.9 | -0.12 | -- | -- | -- | -- | -0.115 | -- | -- | -- | -- | -- |
| 221.77 | 0.697 | 2.89 | -- | 0.145 | -- | -- | -- | -0.104 | 8.09 | -- | -- | -- | -- |
| 195.19 | 0.651 | 2.89 | -- | -- | 3.05 | -- | -- | -0.0762 | -- | 90.61 | 80 | 8.04 | 0.803 |
| 222.92 | 0.697 | 2.9 | -- | -- | -- | -- | -- | -0.102 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 193.94 | humidity | 90 | 90 | > th | dose independent | rect. | 8 | 1 |
| 3 | 196.08 | humidity | 90 | 90 | > th | dose dependent | rect. | 9 | 1 |
| 4 | 198.46 | radiation | 1 | 10 | < th | dose independent | rect. | 6 | 6 |
| 6 | 199.41 | radiation | 1 | 10 | < th | dose dependent | rect. | 6 | 6 |
| 8 | 200.16 | wind | 1 | 30 | < th | dose dependent | rect. | 23 | 1 |
| 10 | 200.65 | wind | 9 | 90 | > th | dose dependent | rect. | 20 | 14 |
| 14 | 201.28 | radiation | 1 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 23 | 201.59 | radiation | 1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 33 | 201.59 | radiation | 1 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 50 | 202.43 | wind | 5 | 10 | > th | dose independent | rect. | 10 | 1 |
| 54 | 202.43 | wind | 5 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 58 | 202.70 | wind | 7 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 84 | 203.62 | radiation | 1 | 90 | < th | dose independent | rect. | 10 | 1 |
| 86 | 203.62 | radiation | 1 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 89 | 204.13 | radiation | 1 | 10 | < th | dose independent | rect. | 11 | 1 |
| 106 | 204.13 | radiation | 1 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 134 | 204.76 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 136 | 204.82 | wind | 1 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 151 | 205.58 | wind | 1 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 159 | 205.99 | wind | 1 | 270 | < th | dose independent | rect. | 22 | 1 |
| 164 | 206.11 | temperature | 25 | 90 | < th | dose independent | rect. | 14 | 1 |
| 180 | 206.85 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 199 | 207.88 | wind | 3 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 206 | 208.22 | wind | 5 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 210 | 208.22 | wind | 7 | 90 | > th | dose independent | rect. | 21 | 13 |
| 213 | 208.34 | wind | 5 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 215 | 208.40 | radiation | 1 | 720 | > th | dose independent | rect. | 4 | 1 |
| 225 | 208.40 | radiation | 1 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 300 | 209.83 | wind | 9 | 1440 | < th | dose dependent | rect. | 24 | 2 |
| 318 | 210.22 | radiation | 1 | 10 | < th | dose independent | rect. | 6 | 1 |
| 333 | 210.50 | wind | 9 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 334 | 210.51 | wind | 9 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 340 | 210.60 | wind | 1 | 30 | < th | dose independent | rect. | 23 | 1 |
| 343 | 210.63 | wind | 1 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 344 | 210.64 | wind | 7 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 352 | 210.70 | wind | 7 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 357 | 210.74 | wind | 9 | 1440 | < th | dose dependent | rect. | 24 | 19 |
| 367 | 210.81 | wind | 1 | 1440 | > th | dose dependent | rect. | 24 | 19 |
| 408 | 211.05 | wind | 5 | 1440 | > th | dose independent | rect. | 15 | 17 |
| 409 | 211.05 | wind | 5 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 423 | 211.07 | wind | 9 | 1440 | < th | dose dependent | rect. | 24 | 8 |
| 443 | 211.14 | wind | 5 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 448 | 211.17 | wind | 5 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 449 | 211.17 | wind | 5 | 1440 | > th | dose independent | rect. | 24 | 20 |
| 477 | 211.26 | wind | 5 | 1440 | < th | dose independent | rect. | 24 | 20 |
| 480 | 211.26 | wind | 7 | 10 | > th | dose dependent | rect. | 21 | 14 |
| 487 | 211.27 | wind | 3 | 1440 | > th | dose dependent | rect. | 12 | 20 |
| 523 | 211.37 | wind | 3 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 524 | 211.38 | wind | 5 | 1440 | > th | dose independent | rect. | 24 | 17 |
| 549 | 211.42 | wind | 5 | 4320 | > th | dose dependent | rect. | 19 | 2 |
| 552 | 211.44 | wind | 5 | 1440 | < th | dose independent | rect. | 24 | 6 |
| 558 | 211.45 | wind | 5 | 1440 | < th | dose independent | rect. | 24 | 17 |
| 574 | 211.48 | wind | 5 | 1440 | > th | dose independent | rect. | 24 | 6 |
| 581 | 211.49 | wind | 5 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 592 | 211.51 | wind | 5 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 656 | 211.60 | wind | 9 | 1440 | < th | dose dependent | rect. | 11 | 21 |
| 686 | 211.66 | wind | 7 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 726 | 211.72 | wind | 5 | 1440 | > th | dose independent | sin | 13 | NA |
| 789 | 211.80 | wind | 5 | 1440 | < th | dose independent | sin | 12 | NA |
| 799 | 211.81 | wind | 5 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 804 | 211.82 | wind | 7 | 10 | > th | dose independent | rect. | 15 | 1 |
| 819 | 211.83 | wind | 5 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 847 | 211.86 | wind | 5 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 855 | 211.87 | wind | 5 | 1440 | > th | dose independent | no | NA | NA |
| 891 | 211.90 | wind | 5 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 892 | 211.90 | wind | 9 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 904 | 211.91 | wind | 5 | 4320 | > th | dose independent | rect. | 16 | 21 |
| 905 | 211.91 | wind | 9 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 909 | 211.92 | wind | 5 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 927 | 211.94 | wind | 5 | 1440 | < th | dose independent | no | NA | NA |
| 956 | 211.96 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 991 | 211.98 | wind | 5 | 4320 | < th | dose independent | rect. | 16 | 21 |