BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0211200 Os06g0211200|AK103188
(324 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0211200 Similar to Abscisic acid responsive elements-b... 451 e-127
Os02g0766700 Similar to Abscisic acid responsive elements-b... 269 2e-72
Os09g0456200 Similar to BZIP transcription factor ABI5 191 4e-49
Os08g0472000 TRAB1 (BZIP transcription factor) 109 3e-24
Os01g0859300 Similar to ABA response element binding factor... 92 6e-19
>Os06g0211200 Similar to Abscisic acid responsive elements-binding factor
(ABA-responsive element binding protein 1) (AREB1)
Length = 324
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/324 (73%), Positives = 237/324 (73%)
Query: 1 MELPADGSALARQGSIYSLTFDEFQSALGSAEKDFGSMNMDELLRNIWTXXXXXXXXXXX 60
MELPADGSALARQGSIYSLTFDEFQSALGSAEKDFGSMNMDELLRNIWT
Sbjct: 1 MELPADGSALARQGSIYSLTFDEFQSALGSAEKDFGSMNMDELLRNIWTAEESQAIAPAA 60
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXSLTLPRTLSQKTVDEVWRDIMGLGGSDDEDXXXXXXX 120
SLTLPRTLSQKTVDEVWRDIMGLGGSDDED
Sbjct: 61 AAASAAAVVGDAQQQQQPIQRQGSLTLPRTLSQKTVDEVWRDIMGLGGSDDEDPAAAAAA 120
Query: 121 XXXXQRQPTLGEMTLEEFLVRAGVVREDMGQTIVLPPQAQALFPGSNVVAPAMQLANXXX 180
QRQPTLGEMTLEEFLVRAGVVREDMGQTIVLPPQAQALFPGSNVVAPAMQLAN
Sbjct: 121 AAPAQRQPTLGEMTLEEFLVRAGVVREDMGQTIVLPPQAQALFPGSNVVAPAMQLANGML 180
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXNGLGKVEGGDLSSLSPVPYPFDTALRVRKGPTVEK 240
NGLGKVEGGDLSSLSPVPYPFDTALRVRKGPTVEK
Sbjct: 181 PGVVGVAPGAAAAMTVAAPATPVVLNGLGKVEGGDLSSLSPVPYPFDTALRVRKGPTVEK 240
Query: 241 VVERRQRRMIKNRESAARSRARKQAYIMELEAEVXXXXXXXXXXXXXXVEMIQKQNDEVM 300
VVERRQRRMIKNRESAARSRARKQAYIMELEAEV VEMIQKQNDEVM
Sbjct: 241 VVERRQRRMIKNRESAARSRARKQAYIMELEAEVAKLKEQKAELQKKQVEMIQKQNDEVM 300
Query: 301 ERITQQLGPKAKRFCLRRTLTGPC 324
ERITQQLGPKAKRFCLRRTLTGPC
Sbjct: 301 ERITQQLGPKAKRFCLRRTLTGPC 324
>Os02g0766700 Similar to Abscisic acid responsive elements-binding factor
(ABA-responsive element binding protein 2) (AREB2)
Length = 357
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/349 (47%), Positives = 187/349 (53%), Gaps = 48/349 (13%)
Query: 10 LARQGSIYSLTFDEFQSALGSAEKDFGSMNMDELLRNIWTXXXXXXXXXXXXXXXXXXXX 69
LARQGS+YSLTFDEFQS LG KDFGSMNMDELLR+IWT
Sbjct: 21 LARQGSVYSLTFDEFQSTLGGVGKDFGSMNMDELLRSIWTAEESHAVGAATTTTATTASV 80
Query: 70 XXXXXXXXXX---XXXXSLTLPRTLSQKTVDEVWRDIMGLGGSDDEDXXXXXXXXXXXQR 126
SLTLPRTLSQKTVDEVWRD+M GG R
Sbjct: 81 AAAEHAAVGAPPVQRQGSLTLPRTLSQKTVDEVWRDMMCFGGGGASTAPAAAEPPPPAHR 140
Query: 127 QPTLGEMTLEEFLVRAGVVREDM------------------------------GQTIVLP 156
Q TLGE+TLEEFLVRAGVVREDM GQ+ V P
Sbjct: 141 QQTLGEITLEEFLVRAGVVREDMSVPPVPPAPTPTAAAVPPPPPPQQQTPMLFGQSNVFP 200
Query: 157 PQAQALFPGSNVVAPAMQLANXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGLGKVEGGDL 216
P L G+ +V+ A+ NG GK+EGGDL
Sbjct: 201 PMVPPLSLGNGLVSGAVGHGGGGAASLVSPVRPVSS-------------NGFGKMEGGDL 247
Query: 217 SSLSP--VPYPFDTALRVRKGPTVEKVVERRQRRMIKNRESAARSRARKQAYIMELEAEV 274
SSLSP VPY F LR RK P +EKVVERRQRRMIKNRESAARSR RKQAY+MELEAEV
Sbjct: 248 SSLSPSPVPYVFKGGLRGRKAPGIEKVVERRQRRMIKNRESAARSRQRKQAYMMELEAEV 307
Query: 275 XXXXXXXXXXXXXXVEMIQKQNDEVMERITQQLGPKAKRFCLRRTLTGP 323
EM+++Q +EV+ER+++Q+GP AKR CLRRTLTGP
Sbjct: 308 AKLKELNDELQKKQDEMLEQQKNEVLERMSRQVGPTAKRICLRRTLTGP 356
>Os09g0456200 Similar to BZIP transcription factor ABI5
Length = 376
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 172/358 (48%), Gaps = 50/358 (13%)
Query: 5 ADGSALARQGSIYSLTFDEFQSALGSAE----------KDFGSMNMDELLRNIWTXXXXX 54
A+G+ LARQGS+YSLTFDEFQSAL KDFGSMNMDELLR+IWT
Sbjct: 29 AEGATLARQGSVYSLTFDEFQSALAGGGGGGGGGSGFGKDFGSMNMDELLRSIWTAEESQ 88
Query: 55 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTLPRTLSQKTVDEVWRDIM-----GLGGS 109
SLTLPRTLS KTVDEVWR+++ +G +
Sbjct: 89 AMASASGSAAGVGVAVGAPPTSLQRQG--SLTLPRTLSAKTVDEVWRNLVRDEPPPVGAA 146
Query: 110 DDEDXXXXXXXXXXXQRQPTLGEMTLEEFLVRAGVVREDMGQTIVLPPQAQAL------- 162
D D QRQ TLGEMTLEEFLVRAGVVRE+ P
Sbjct: 147 DGGDMPP--------QRQSTLGEMTLEEFLVRAGVVRENPPAAPPPVPPPMPPRPVPVVP 198
Query: 163 --------FPGSN-VVAPAMQLA----NXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGLG 209
FPG+N A A+ A N
Sbjct: 199 KTTAFLGNFPGANDAGAAALGFAPLGMGDPALGNGLMPRAVPVGLPGAAVAMQTAVNQFD 258
Query: 210 KVEGGDLSSLSPV-PYP--FDTALRVRK-GPTVEKVVERRQRRMIKNRESAARSRARKQA 265
+ G+ SP P P F+ +R R+ G VEKVVERRQRRMIKNRESAARSRARKQA
Sbjct: 259 SGDKGNSDLSSPTEPMPYSFEGLVRGRRNGGGVEKVVERRQRRMIKNRESAARSRARKQA 318
Query: 266 YIMELEAEVXXXXXXXXXXXXXXVEMIQKQNDEVMERITQQLGPKAKRFCLRRTLTGP 323
Y +ELEAEV ++++ Q +EV E I G + KR CLRRTLTGP
Sbjct: 319 YTLELEAEVQKLKEMNKELERKQADIMEMQKNEVEEMIKDPFG-RRKRLCLRRTLTGP 375
>Os08g0472000 TRAB1 (BZIP transcription factor)
Length = 318
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 78/120 (65%), Gaps = 12/120 (10%)
Query: 214 GDLSS-LSPVPYPFDTALRVRK-GPTVEKVVERRQRRMIKNRESAARSRARKQAYIMELE 271
GDLSS ++PVPYPF+ +R R+ G VEKVVERRQRRMIKNRESAARSRARKQAY MELE
Sbjct: 200 GDLSSPMAPVPYPFEGVIRGRRSGGNVEKVVERRQRRMIKNRESAARSRARKQAYTMELE 259
Query: 272 AEVXXXXXXXXXXXXXXVEMI--------QKQNDEVMERITQQLGPKAKRFCLRRTLTGP 323
AEV E++ + Q ++V+E + G K + CLRRTLTGP
Sbjct: 260 AEVQKLKEQNMELQKKQEEIMEMQKNFFPEMQKNQVLEAVNNPYGQKKR--CLRRTLTGP 317
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 38 MNMDELLRNIWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTLPRTLSQKTVD 97
MNMDELLR+IWT SLTLPRTLS KTVD
Sbjct: 1 MNMDELLRSIWTAEESQAMASASAAAAAAEGGLQRQG---------SLTLPRTLSVKTVD 51
Query: 98 EVWRDIMGLGGSDDEDXXXXXXXXXXXQ--RQPTLGEMTLEEFLVRAGVVRED 148
EVWRD+ Q RQPTLGEMTLEEFLVRAGVVRE+
Sbjct: 52 EVWRDLEREASPGAAAADGGGGGGEQQQPRRQPTLGEMTLEEFLVRAGVVREN 104
>Os01g0859300 Similar to ABA response element binding factor (Fragment)
Length = 323
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 109/281 (38%), Gaps = 55/281 (19%)
Query: 37 SMNMDELLRNIWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----SLTLPRTL 91
SMNMDE + NIW S +LP L
Sbjct: 1 SMNMDEFVANIWNAEEFQATTGGCKGAMEEAKVVDSGSGSGDAGGSGLCRQGSFSLPLPL 60
Query: 92 SQKTVDEVWRDI-----------------MGLGGSDDEDXXXXXXXXXXXQRQPTLGEMT 134
QKTV+EVW +I G GG D RQ TLGEMT
Sbjct: 61 CQKTVEEVWTEINQAPAHTSAPASALQPHAGSGGVAAND------------RQVTLGEMT 108
Query: 135 LEEFLVRAGVVRED------MGQTIVLPP-----QAQA---LFPGS--NVVAPAMQ--LA 176
LE+FLV+AGVVR MG +V P Q Q +FP N + P M +
Sbjct: 109 LEDFLVKAGVVRGSFTGQAAMGSGMVNGPVNPMQQGQGGPMMFPVGPVNAMYPVMGDGMG 168
Query: 177 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGLGKVEGGDLSSLSPVPYPFDTALR---VR 233
+G+ + D+ + + R R
Sbjct: 169 YPGGYNGMAIVPPPPPAQGAMVVVSPGSSDGMSAMTHADMMNCIGNGMMIENGTRKRPHR 228
Query: 234 KGPTVEKVVERRQRRMIKNRESAARSRARKQAYIMELEAEV 274
+ EK VERRQRRMIKNRESAARSRARKQAY +ELEAE+
Sbjct: 229 EDGCAEKTVERRQRRMIKNRESAARSRARKQAYTVELEAEL 269
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.133 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,738,024
Number of extensions: 222439
Number of successful extensions: 642
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 632
Number of HSP's successfully gapped: 10
Length of query: 324
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 223
Effective length of database: 11,762,187
Effective search space: 2622967701
Effective search space used: 2622967701
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 156 (64.7 bits)