Os01g0859300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ABA response element binding factor (Fragment).
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Os01g0859300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ABA response element binding factor (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.21 | 0.526 | 3.86 | 2.05 | 0.525 | -1.71 | 1.08 | 0.92 | 0.207 | 2.38 | 19.43 | 1433 | -- | -- |
| 124.93 | 0.521 | 3.88 | 2.05 | 0.666 | -2.02 | 1.15 | -- | 0.177 | 1.56 | 17 | 2358 | -- | -- |
| 129.2 | 0.529 | 3.86 | 2.06 | 0.547 | -1.73 | -- | 1.07 | 0.211 | 2.8 | 19.26 | 1419 | -- | -- |
| 129.06 | 0.529 | 3.9 | 1.9 | 0.635 | -1.97 | -- | -- | 0.169 | 1.79 | 16.11 | 2340 | -- | -- |
| 139.67 | 0.55 | 3.86 | 2.1 | -- | -1.75 | -- | 1.13 | 0.225 | -- | 19.78 | 1730 | -- | -- |
| 207.53 | 0.675 | 3.98 | 1.16 | 0.409 | -- | 1.02 | -- | -0.257 | 2.27 | -- | -- | -- | -- |
| 211.09 | 0.68 | 3.98 | 1.13 | 0.423 | -- | -- | -- | -0.264 | 2.92 | -- | -- | -- | -- |
| 139.83 | 0.551 | 3.89 | 1.84 | -- | -2.05 | -- | -- | 0.155 | -- | 16.28 | 1725 | -- | -- |
| 200.62 | 0.66 | 3.98 | -- | 0.596 | -1.08 | -- | -- | -0.204 | 2.85 | 21.21 | 1369 | -- | -- |
| 221.38 | 0.695 | 3.98 | 1.15 | -- | -- | -- | -- | -0.253 | -- | -- | -- | -- | -- |
| 244.74 | 0.732 | 4.01 | -- | 0.445 | -- | -- | -- | -0.39 | 2.94 | -- | -- | -- | -- |
| 212.64 | 0.679 | 3.96 | -- | -- | -1.12 | -- | -- | -0.174 | -- | 21.38 | 1744 | -- | -- |
| 256.14 | 0.747 | 4.01 | -- | -- | -- | -- | -- | -0.38 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.14 | radiation | 1 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 23 | 121.37 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 34 | 121.46 | radiation | 1 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 54 | 121.53 | radiation | 1 | 14400 | > th | dose independent | sin | 18 | NA |
| 80 | 121.66 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 11 |
| 87 | 121.66 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 20 |
| 128 | 122.02 | radiation | 1 | 14400 | < th | dose independent | rect. | 12 | 7 |
| 134 | 122.02 | radiation | 1 | 14400 | < th | dose independent | rect. | 12 | 16 |
| 148 | 122.05 | radiation | 1 | 14400 | < th | dose independent | rect. | 12 | 14 |
| 150 | 122.05 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 11 |
| 167 | 122.11 | radiation | 1 | 14400 | < th | dose independent | sin | 19 | NA |
| 179 | 122.15 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 7 |
| 180 | 122.15 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 9 |
| 184 | 122.17 | radiation | 1 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 196 | 122.20 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 197 | 122.20 | radiation | 1 | 14400 | < th | dose dependent | rect. | 14 | 8 |
| 231 | 122.34 | radiation | 1 | 14400 | < th | dose dependent | rect. | 9 | 10 |
| 251 | 122.37 | radiation | 1 | 14400 | < th | dose dependent | rect. | 9 | 14 |
| 259 | 122.41 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 299 | 122.53 | radiation | 1 | 14400 | < th | dose dependent | sin | 18 | NA |
| 304 | 122.54 | radiation | 1 | 14400 | < th | dose dependent | rect. | 14 | 14 |
| 316 | 122.56 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 341 | 122.70 | radiation | 1 | 14400 | < th | dose dependent | rect. | 9 | 19 |
| 538 | 123.41 | radiation | 1 | 14400 | < th | dose independent | rect. | 6 | 13 |
| 544 | 123.41 | radiation | 1 | 14400 | < th | dose independent | rect. | 6 | 22 |
| 586 | 123.50 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 600 | 123.56 | temperature | 15 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 649 | 123.67 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 14 |
| 658 | 123.68 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 18 |
| 695 | 123.77 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 707 | 123.77 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 16 |
| 724 | 123.78 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 20 |
| 734 | 123.80 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 769 | 123.87 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 5 |
| 772 | 123.88 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 23 |
| 785 | 123.91 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 5 |
| 830 | 123.97 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 832 | 123.97 | radiation | 1 | 14400 | < th | dose dependent | rect. | 22 | 21 |
| 859 | 123.99 | radiation | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 880 | 124.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 16 |
| 894 | 124.02 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 6 |