BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0107000 Os06g0107000|AK069627
         (187 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0107000  Protein of unknown function DUF862, eukaryotic...   308   2e-84
Os10g0533900  Protein of unknown function DUF862, eukaryotic...   164   4e-41
Os06g0182100  Protein of unknown function DUF862, eukaryotic...    74   8e-14
Os03g0198500  Protein of unknown function DUF862, eukaryotic...    65   4e-11

>Os06g0107000 Protein of unknown function DUF862, eukaryotic domain containing
           protein
          Length = 187

 Score =  308 bits (789), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 152/187 (81%), Positives = 152/187 (81%)

Query: 1   MYTYRESIVLGKTTCSIFTVNQILRELSWKWPGGSYELLSRNCNHFCNTFCEKLDVPKLP 60
           MYTYRESIVLGKTTCSIFTVNQILRELSWKWPGGSYELLSRNCNHFCNTFCEKLDVPKLP
Sbjct: 1   MYTYRESIVLGKTTCSIFTVNQILRELSWKWPGGSYELLSRNCNHFCNTFCEKLDVPKLP 60

Query: 61  AWVNRFANAGDAALEVAENTAEKLKQAKKDIAGACKAATTYLTXXXXXXXXXXXXXXXXT 120
           AWVNRFANAGDAALEVAENTAEKLKQAKKDIAGACKAATTYLT                T
Sbjct: 61  AWVNRFANAGDAALEVAENTAEKLKQAKKDIAGACKAATTYLTGASSSSPSNADDSGGST 120

Query: 121 NSSLFEGTWLRSIIGISMKPSRSLMCXXXXXXXXXXXXXXXXXXXCQQPSGDQIEEKKDA 180
           NSSLFEGTWLRSIIGISMKPSRSLMC                   CQQPSGDQIEEKKDA
Sbjct: 121 NSSLFEGTWLRSIIGISMKPSRSLMCSDSSDSSDDEKSEDERESDCQQPSGDQIEEKKDA 180

Query: 181 TQEQAGK 187
           TQEQAGK
Sbjct: 181 TQEQAGK 187



>Os10g0533900 Protein of unknown function DUF862, eukaryotic domain containing
           protein
          Length = 246

 Score =  164 bits (415), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 79/142 (55%), Positives = 94/142 (66%), Gaps = 2/142 (1%)

Query: 1   MYTYRESIVLGKTTCSIFTVNQILRELSWKWPGGSYELLSRNCNHFCNTFCEKLDVPKLP 60
           MYTYRE IVLG+T CSI TVN+ILRELS +WPG SY+LLSRNCNHFC+  CE+L VPKLP
Sbjct: 73  MYTYRECIVLGETECSIATVNRILRELSREWPGHSYDLLSRNCNHFCDVLCERLAVPKLP 132

Query: 61  AWVNRFANAGDAALEVAENTAEKLKQAKKDIAGACKAATTYLT--XXXXXXXXXXXXXXX 118
            WVNRFANAGD A+ VAENTA K +QAK +I  A + A  ++                  
Sbjct: 133 GWVNRFANAGDTAVVVAENTAVKFRQAKTEIVNASRVAYRFMAGLASKNQNPQPESPSNQ 192

Query: 119 XTNSSLFEGTWLRSIIGISMKP 140
             N   F+GTW ++II    KP
Sbjct: 193 SRNGPTFQGTWFKNIISNGAKP 214



>Os06g0182100 Protein of unknown function DUF862, eukaryotic domain containing
           protein
          Length = 271

 Score = 73.6 bits (179), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 45/69 (65%)

Query: 2   YTYRESIVLGKTTCSIFTVNQILRELSWKWPGGSYELLSRNCNHFCNTFCEKLDVPKLPA 61
           Y +RE+I++G T  +   V  ++ +L+  +PG +Y L+SRNCNHFC+  C +L   ++P 
Sbjct: 109 YAFREAILVGTTELTRAEVRAVMADLAADFPGDAYNLVSRNCNHFCDAACRRLVRARIPR 168

Query: 62  WVNRFANAG 70
           WVNR A  G
Sbjct: 169 WVNRLAKIG 177



>Os03g0198500 Protein of unknown function DUF862, eukaryotic domain containing
           protein
          Length = 247

 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 39/69 (56%)

Query: 2   YTYRESIVLGKTTCSIFTVNQILRELSWKWPGGSYELLSRNCNHFCNTFCEKLDVPKLPA 61
           + +R+SI LG T      V Q +   S  + G +Y L+++NCNHFC   C KL   K+P 
Sbjct: 100 FRFRKSIFLGTTCLDPIQVRQFMELQSVNYNGDTYHLITKNCNHFCKDMCYKLTGNKIPK 159

Query: 62  WVNRFANAG 70
           WVNR A  G
Sbjct: 160 WVNRLARIG 168



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.316    0.129    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,920,055
Number of extensions: 150169
Number of successful extensions: 325
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 322
Number of HSP's successfully gapped: 4
Length of query: 187
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 92
Effective length of database: 12,075,471
Effective search space: 1110943332
Effective search space used: 1110943332
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 153 (63.5 bits)