Os06g0107000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF862, eukaryotic domain containing protein.
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Os06g0107000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF862, eukaryotic domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 260.81 | 0.759 | 4.33 | -0.995 | 0.317 | 1.48 | -0.773 | 0.48 | -0.704 | 16.1 | 18.7 | 759 | -- | -- |
| 261 | 0.752 | 4.35 | -1.1 | 0.309 | 1.51 | -0.783 | -- | -0.736 | 15.9 | 18.8 | 757 | -- | -- |
| 261.21 | 0.753 | 4.34 | -0.967 | 0.616 | 1.35 | -- | 0.568 | -0.694 | 17.5 | 17.97 | 1067 | -- | -- |
| 261.49 | 0.753 | 4.36 | -1.13 | 0.613 | 1.37 | -- | -- | -0.735 | 17.5 | 18.17 | 1067 | -- | -- |
| 265.01 | 0.758 | 4.34 | -0.944 | -- | 1.6 | -- | 0.681 | -0.705 | -- | 18.42 | 593 | -- | -- |
| 301.86 | 0.815 | 4.3 | -0.677 | 0.638 | -- | 0.342 | -- | -0.463 | 19.2 | -- | -- | -- | -- |
| 302.12 | 0.814 | 4.3 | -0.683 | 0.642 | -- | -- | -- | -0.462 | 19 | -- | -- | -- | -- |
| 264.77 | 0.758 | 4.35 | -1.1 | -- | 1.6 | -- | -- | -0.751 | -- | 18.86 | 587 | -- | -- |
| 290.08 | 0.793 | 4.31 | -- | 0.375 | 1.07 | -- | -- | -0.551 | 17.2 | 20.87 | 759 | -- | -- |
| 323.78 | 0.841 | 4.29 | -0.696 | -- | -- | -- | -- | -0.474 | -- | -- | -- | -- | -- |
| 314.4 | 0.829 | 4.28 | -- | 0.649 | -- | -- | -- | -0.386 | 19 | -- | -- | -- | -- |
| 292.88 | 0.797 | 4.31 | -- | -- | 1.25 | -- | -- | -0.575 | -- | 21.1 | 560 | -- | -- |
| 336.54 | 0.856 | 4.27 | -- | -- | -- | -- | -- | -0.397 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 255.53 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 2 | 255.55 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 5 | 255.67 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 7 | 255.71 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 12 | 255.92 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 21 | 10 |
| 73 | 256.85 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 102 | 257.08 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 109 | 257.14 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 14 |
| 120 | 257.26 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 122 | 257.26 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 127 | 257.34 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 132 | 257.37 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 149 | 257.53 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 12 | NA |
| 165 | 257.69 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 178 | 257.74 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 16 | 14 |
| 191 | 257.81 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 15 | 15 |
| 233 | 258.06 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 242 | 258.10 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 258 | 258.17 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 285 | 258.32 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 286 | 258.32 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 20 | 11 |
| 295 | 258.35 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 13 | NA |
| 302 | 258.36 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 20 | 11 |
| 350 | 258.50 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 8 | 9 |
| 352 | 258.50 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 390 | 258.62 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 8 | 9 |
| 454 | 258.82 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 664 | 259.44 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 697 | 259.51 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 22 | 21 |
| 699 | 259.52 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 779 | 259.70 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 780 | 259.70 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 807 | 259.74 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 817 | 259.76 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 842 | 259.82 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 14 | 9 |
| 848 | 259.84 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 849 | 259.84 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 11 | 6 |
| 894 | 259.94 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 11 | 3 |
| 921 | 260.00 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 964 | 260.07 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 994 | 260.13 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 11 | 1 |