Os03g0198500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF862, eukaryotic domain containing protein.
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Os03g0198500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF862, eukaryotic domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.64 | 0.224 | 11 | -0.65 | 1.05 | 0.346 | -0.334 | -0.331 | -0.236 | 2.2 | 19.1 | 25 | -- | -- |
| 22.83 | 0.223 | 11 | -0.624 | 1.05 | 0.408 | -0.221 | -- | -0.227 | 2.22 | 19.2 | 100 | -- | -- |
| 22.86 | 0.223 | 11 | -0.635 | 1.05 | 0.363 | -- | -0.227 | -0.234 | 2.24 | 19.19 | 86 | -- | -- |
| 23 | 0.223 | 11 | -0.615 | 1.05 | 0.405 | -- | -- | -0.225 | 2.25 | 19.11 | 93 | -- | -- |
| 79.53 | 0.415 | 11 | -0.672 | -- | 0.588 | -- | -0.268 | -0.23 | -- | 18.32 | 1001 | -- | -- |
| 27.2 | 0.245 | 11 | -0.496 | 0.981 | -- | -0.13 | -- | -0.171 | 2.3 | -- | -- | -- | -- |
| 27.26 | 0.245 | 11 | -0.493 | 0.981 | -- | -- | -- | -0.171 | 2.31 | -- | -- | -- | -- |
| 79.5 | 0.415 | 11 | -0.631 | -- | 0.635 | -- | -- | -0.214 | -- | 18.3 | 1002 | -- | -- |
| 31.72 | 0.262 | 11 | -- | 1.02 | 0.233 | -- | -- | -0.159 | 2.24 | 20.2 | 57 | -- | -- |
| 84.34 | 0.429 | 11 | -0.451 | -- | -- | -- | -- | -0.147 | -- | -- | -- | -- | -- |
| 33.66 | 0.271 | 11 | -- | 0.971 | -- | -- | -- | -0.116 | 2.3 | -- | -- | -- | -- |
| 60.32 | 0.362 | 11 | -- | -- | -0.637 | -- | -- | -0.0221 | -- | 27.7 | 128 | -- | -- |
| 89.72 | 0.442 | 11 | -- | -- | -- | -- | -- | -0.0966 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.50 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 14 |
| 2 | 20.64 | temperature | 20 | 30 | > th | dose independent | rect. | 18 | 14 |
| 15 | 21.07 | temperature | 20 | 90 | > th | dose independent | sin | 12 | NA |
| 19 | 21.11 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 13 |
| 29 | 21.26 | temperature | 20 | 30 | > th | dose independent | rect. | 18 | 12 |
| 41 | 21.40 | temperature | 20 | 270 | < th | dose independent | rect. | 19 | 9 |
| 46 | 21.43 | temperature | 20 | 90 | < th | dose independent | sin | 11 | NA |
| 47 | 21.43 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 9 |
| 62 | 21.50 | temperature | 15 | 10 | > th | dose dependent | sin | 11 | NA |
| 72 | 21.54 | temperature | 15 | 90 | > th | dose dependent | sin | 12 | NA |
| 75 | 21.55 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 88 | 21.61 | temperature | 20 | 10 | < th | dose independent | rect. | 22 | 8 |
| 107 | 21.65 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 109 | 21.66 | temperature | 20 | 10 | < th | dose independent | rect. | 20 | 10 |
| 132 | 21.72 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 9 |
| 135 | 21.73 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 11 |
| 167 | 21.80 | temperature | 25 | 10 | < th | dose dependent | sin | 11 | NA |
| 227 | 21.91 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 7 |
| 229 | 21.91 | temperature | 20 | 10 | < th | dose independent | rect. | 18 | 12 |
| 234 | 21.91 | temperature | 25 | 270 | < th | dose dependent | sin | 14 | NA |
| 266 | 21.97 | temperature | 20 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 281 | 21.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 324 | 22.03 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 13 |
| 330 | 22.04 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 335 | 22.05 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 406 | 22.11 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 15 |
| 484 | 22.17 | temperature | 20 | 10 | < th | dose dependent | rect. | 12 | 19 |
| 488 | 22.18 | temperature | 20 | 90 | < th | dose independent | rect. | 12 | 18 |
| 490 | 22.18 | temperature | 20 | 270 | < th | dose dependent | rect. | 23 | 2 |
| 653 | 22.25 | temperature | 20 | 10 | < th | dose independent | rect. | 14 | 16 |
| 922 | 22.39 | temperature | 20 | 10 | < th | dose independent | rect. | 12 | 18 |
| 943 | 22.40 | temperature | 20 | 30 | > th | dose independent | rect. | 13 | 23 |