BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0198500 Os03g0198500|AK071509
(247 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G47740.1 | chr1:17567903-17569035 FORWARD LENGTH=280 301 3e-82
AT1G80690.1 | chr1:30329283-30330524 REVERSE LENGTH=228 229 9e-61
AT5G25170.1 | chr5:8693257-8694438 FORWARD LENGTH=219 226 1e-59
AT5G47310.1 | chr5:19201325-19202674 FORWARD LENGTH=246 221 3e-58
AT2G25190.1 | chr2:10734187-10735426 FORWARD LENGTH=241 220 7e-58
AT4G17486.1 | chr4:9749992-9751201 REVERSE LENGTH=225 217 4e-57
AT4G31980.1 | chr4:15464905-15469204 FORWARD LENGTH=681 204 3e-53
AT4G25680.1 | chr4:13088425-13089952 FORWARD LENGTH=253 80 1e-15
AT4G25660.1 | chr4:13083677-13084989 FORWARD LENGTH=256 80 1e-15
AT3G07090.1 | chr3:2243153-2244476 REVERSE LENGTH=266 56 2e-08
>AT1G47740.1 | chr1:17567903-17569035 FORWARD LENGTH=280
Length = 279
Score = 301 bits (770), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 151/231 (65%), Positives = 183/231 (79%), Gaps = 4/231 (1%)
Query: 1 MKLRPKRPGWKSLMPLQLSRKSALRFFLFPKVQAAGQSPDDTPVYLNVYDLTPMNGYVYW 60
MK+ K+ WKSL PL L KS RF F K+++ P PVYLNVYDLTP+NGY+YW
Sbjct: 29 MKVVSKKR-WKSLGPLHLKSKSVARFCFFSKLKSNNHGPGRAPVYLNVYDLTPINGYIYW 87
Query: 61 AGLGIFHSGIEVHGVEYAFGAHDYPSSGVFEVEPRQCPGFRFRKSIFLGTTCLDPIQVRQ 120
AGLGIFHSG+EVHGVEYAFGAHDY +SGVFEVEPRQCPGF+F+KSIF+GTT L+P QVR+
Sbjct: 88 AGLGIFHSGVEVHGVEYAFGAHDYATSGVFEVEPRQCPGFKFKKSIFIGTTNLNPTQVRE 147
Query: 121 FMELQSVNYNGDTYHLITKNCNHFCKDMCYKLTGNKIPKWVNRLARIGAICNCLLPESLK 180
FME + +Y G+ YHLI KNCNHFC+D+CYKLTG KIPKWVNRLA+IG++C+C+LPESLK
Sbjct: 148 FMEDMACSYYGNMYHLIVKNCNHFCQDVCYKLTGKKIPKWVNRLAQIGSVCSCILPESLK 207
Query: 181 ISPVGHDPNSR--PEDCEKRRLRNPLSCFSSIS-SQRQLPPSSPFPTSPVK 228
I+ V HDP+ + E+ EKR LR+ SC SSIS Q+QL SS F SP++
Sbjct: 208 ITAVCHDPDGQIPEEENEKRSLRSSFSCLSSISMRQKQLSTSSLFLQSPLR 258
>AT1G80690.1 | chr1:30329283-30330524 REVERSE LENGTH=228
Length = 227
Score = 229 bits (584), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 99/169 (58%), Positives = 129/169 (76%)
Query: 41 DTPVYLNVYDLTPMNGYVYWAGLGIFHSGIEVHGVEYAFGAHDYPSSGVFEVEPRQCPGF 100
+ PVYLNVYDLTP+NGY YW GLG++HSG+EVHG+EYA+GAH+YPS+G+FE EP+QC GF
Sbjct: 14 NVPVYLNVYDLTPINGYAYWLGLGVYHSGVEVHGIEYAYGAHEYPSTGIFEGEPKQCEGF 73
Query: 101 RFRKSIFLGTTCLDPIQVRQFMELQSVNYNGDTYHLITKNCNHFCKDMCYKLTGNKIPKW 160
FRKSI +G T L P++VR ME + NY G +Y+LITKNCNHFC + C KLTGN IP W
Sbjct: 74 TFRKSILIGKTDLGPLEVRATMEQLADNYKGSSYNLITKNCNHFCDETCIKLTGNPIPSW 133
Query: 161 VNRLARIGAICNCLLPESLKISPVGHDPNSRPEDCEKRRLRNPLSCFSS 209
VNRLARIG +CNC+LP ++ + G++ ++ + CE + L+ SS
Sbjct: 134 VNRLARIGFMCNCVLPATINATRFGNNRVNQDKSCEAENEKKKLTSVSS 182
>AT5G25170.1 | chr5:8693257-8694438 FORWARD LENGTH=219
Length = 218
Score = 226 bits (575), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 128/179 (71%), Gaps = 4/179 (2%)
Query: 32 VQAAGQSPDDTPVYLNVYDLTPMNGYVYWAGLGIFHSGIEVHGVEYAFGAHDYPSSGVFE 91
V + P PVYLNVYDLTP+NGY YW GLGI+HSG+EVHGVEY FGAHD+ ++G+FE
Sbjct: 8 VTGRKKKPGSVPVYLNVYDLTPINGYAYWLGLGIYHSGVEVHGVEYGFGAHDHSTTGIFE 67
Query: 92 VEPRQCPGFRFRKSIFLGTTCLDPIQVRQFMELQSVNYNGDTYHLITKNCNHFCKDMCYK 151
VEP+QCPGF FRKSI +G T LDP VR FME + Y+G++YHLITKNCNHFC D+C +
Sbjct: 68 VEPKQCPGFTFRKSILIGRTDLDPENVRVFMEKLAEEYSGNSYHLITKNCNHFCNDVCVQ 127
Query: 152 LTGNKIPKWVNRLARIGAICNCLLPESL---KISPVGHDPNSRPEDCEKRRLRNPLSCF 207
LT IP WVNRLAR G CNC+LP L K+ V PE EK++LR+ S F
Sbjct: 128 LTRRSIPSWVNRLARFGLFCNCVLPAELNETKVRQVRSKEEKIPE-VEKKKLRSRSSRF 185
>AT5G47310.1 | chr5:19201325-19202674 FORWARD LENGTH=246
Length = 245
Score = 221 bits (563), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 95/145 (65%), Positives = 116/145 (80%)
Query: 42 TPVYLNVYDLTPMNGYVYWAGLGIFHSGIEVHGVEYAFGAHDYPSSGVFEVEPRQCPGFR 101
TPVYLNVYDLTP+N Y+YW GLGIFHSGIE HG EY +GAH+Y SSGVFEVEPR CPGF
Sbjct: 28 TPVYLNVYDLTPVNNYLYWFGLGIFHSGIEAHGFEYGYGAHEYSSSGVFEVEPRSCPGFI 87
Query: 102 FRKSIFLGTTCLDPIQVRQFMELQSVNYNGDTYHLITKNCNHFCKDMCYKLTGNKIPKWV 161
FR+S+ LGTT + R FME S Y+GDTYHLI KNCNHF +++C ++TG IP W+
Sbjct: 88 FRRSVLLGTTSMSRSDFRSFMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQVTGKPIPGWI 147
Query: 162 NRLARIGAICNCLLPESLKISPVGH 186
NR+AR+G+ CNC+LPES+++S V H
Sbjct: 148 NRMARVGSFCNCILPESIQLSSVNH 172
>AT2G25190.1 | chr2:10734187-10735426 FORWARD LENGTH=241
Length = 240
Score = 220 bits (560), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 120/166 (72%)
Query: 37 QSPDDTPVYLNVYDLTPMNGYVYWAGLGIFHSGIEVHGVEYAFGAHDYPSSGVFEVEPRQ 96
+ PVYLNVYDLTPMN Y YW GLG+FHSG+EVHGVEYAFGAH+ S+G+FEVEP++
Sbjct: 12 KQSGSVPVYLNVYDLTPMNAYGYWLGLGVFHSGVEVHGVEYAFGAHESSSTGIFEVEPKK 71
Query: 97 CPGFRFRKSIFLGTTCLDPIQVRQFMELQSVNYNGDTYHLITKNCNHFCKDMCYKLTGNK 156
CPGF FRKSI +G T L +VR FME + Y G+ YHLIT+NCNHFC ++C KL
Sbjct: 72 CPGFTFRKSILVGKTDLVAKEVRVFMEKLAEEYQGNKYHLITRNCNHFCNEVCLKLAQKS 131
Query: 157 IPKWVNRLARIGAICNCLLPESLKISPVGHDPNSRPEDCEKRRLRN 202
IP+WVNRLAR+G +CNC+LP L + V + EK++LRN
Sbjct: 132 IPRWVNRLARLGVLCNCVLPPRLNEAKVRRVGKGELSESEKKKLRN 177
>AT4G17486.1 | chr4:9749992-9751201 REVERSE LENGTH=225
Length = 224
Score = 217 bits (553), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 117/147 (79%)
Query: 42 TPVYLNVYDLTPMNGYVYWAGLGIFHSGIEVHGVEYAFGAHDYPSSGVFEVEPRQCPGFR 101
TPVYLNVYDLTP+N Y+YW G+GIFHSGIE H +EY +GAH+YP+SGV+EVEPR CPGF
Sbjct: 26 TPVYLNVYDLTPVNNYLYWFGIGIFHSGIEAHNLEYCYGAHEYPTSGVYEVEPRNCPGFI 85
Query: 102 FRKSIFLGTTCLDPIQVRQFMELQSVNYNGDTYHLITKNCNHFCKDMCYKLTGNKIPKWV 161
FR+S+ LGTT + R +ME S Y+GDTYHLI KNCNHF +++C +LTG IP W+
Sbjct: 86 FRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWI 145
Query: 162 NRLARIGAICNCLLPESLKISPVGHDP 188
NRLAR+G+ CNCLLPES++++ V P
Sbjct: 146 NRLARVGSFCNCLLPESIQLTAVSALP 172
>AT4G31980.1 | chr4:15464905-15469204 FORWARD LENGTH=681
Length = 680
Score = 204 bits (519), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 93/149 (62%), Positives = 111/149 (74%), Gaps = 3/149 (2%)
Query: 42 TPVYLNVYDLTPMNGYVYWAGLGIFHSGIEVHGVEYAFGAHDYPSSGVFEVEPRQCPGFR 101
PVYLNVYDLTPMN Y YW G+GI+HSG+EVHGVEY +GAH+ SSG+FEVEP++CPGF
Sbjct: 17 VPVYLNVYDLTPMNVYGYWLGIGIYHSGLEVHGVEYGYGAHEKSSSGIFEVEPKKCPGFT 76
Query: 102 FRKSIFLGTTCLDPIQVRQFMELQSVNYNGDTYHLITKNCNHFCKDMCYKLTGNKIPKWV 161
FRKSI +G T + +VR FME S Y G+ YHLIT+NCNHFC + KLT IP WV
Sbjct: 77 FRKSILVGETEMKAKEVRSFMEKLSEEYQGNKYHLITRNCNHFCNHVSLKLTHKSIPSWV 136
Query: 162 NRLARIGAICNCLLPESL---KISPVGHD 187
NRLAR+G +CNC+LP L K+ VG D
Sbjct: 137 NRLARLGFLCNCVLPACLNETKVKRVGKD 165
>AT4G25680.1 | chr4:13088425-13089952 FORWARD LENGTH=253
Length = 252
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 64 GIFHSGIEVHGV-EYAFGAHDYPSSGVFEVEPRQCPGFRFRKSIFLGTTCLDPIQVRQFM 122
GIFHS I+V+G E+++G + +GVF + P + +R+ I LG T V Q +
Sbjct: 38 GIFHSAIQVYGNDEWSYGYCEL-GTGVFSCPSGKNPMYTYREKIVLGKTDCTIFMVNQML 96
Query: 123 ELQSVNYNGDTYHLITKNCNHFCKDMCYKLTGNKIPKWVNRLARIG 168
S + G TY L++KNCNHFC +C +L KIP WVNR A G
Sbjct: 97 RELSREWPGHTYDLLSKNCNHFCDVLCDRLGVPKIPGWVNRFANAG 142
>AT4G25660.1 | chr4:13083677-13084989 FORWARD LENGTH=256
Length = 255
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 64 GIFHSGIEVHGV-EYAFGAHDYPSSGVFEVEPRQCPGFRFRKSIFLGTTCLDPIQVRQFM 122
GIFHS I+V+G E+++G + +GVF + P + +R+ I LG T V Q +
Sbjct: 38 GIFHSAIQVYGNDEWSYGYCE-QGTGVFSCPSGKNPMYTYREKIVLGKTDCTIFMVNQIL 96
Query: 123 ELQSVNYNGDTYHLITKNCNHFCKDMCYKLTGNKIPKWVNRLARIG 168
S + G TY L++KNCNHFC +C +L KIP WVNR A G
Sbjct: 97 RELSREWPGHTYDLLSKNCNHFCDVLCDRLGVPKIPGWVNRFAHAG 142
>AT3G07090.1 | chr3:2243153-2244476 REVERSE LENGTH=266
Length = 265
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 44 VYLNVYDLTPMNGYVYWAGL------GIFHSGIEVHGVEYAFGAHDYPSSGVFEVEPRQC 97
V LNVYDL+ L G++H+GI V+G EY FG G+ + +
Sbjct: 8 VTLNVYDLSQGLARQLSQSLLGKVIEGVWHTGIVVYGNEYFFGG------GIQHLPVGRT 61
Query: 98 PGFRFRKSIFLGTTCLDPIQVRQFMELQSVNYNGDTYHLITKNCNHFCKDMCYKLTGNKI 157
P ++I LG + + ++E S Y ++Y+L+T NCN+F ++ L G I
Sbjct: 62 PYGTPIRTIELGLSHVPKDVFEMYLEEISPRYTAESYNLLTHNCNNFSNEVAQFLVGKGI 121
Query: 158 PKWVNRL------ARIGAICNCL---LPESLKISPVGHDPNSRPE 193
P ++ +L + +G + + L +LK V P RP+
Sbjct: 122 PDYILQLPNDVLNSPMGGLIMPMLQGLETTLKAGAVPQVPQFRPQ 166
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.139 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,725,754
Number of extensions: 252617
Number of successful extensions: 542
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 539
Number of HSP's successfully gapped: 10
Length of query: 247
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 151
Effective length of database: 8,474,633
Effective search space: 1279669583
Effective search space used: 1279669583
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 110 (47.0 bits)