BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0558400 Os05g0558400|AK072756
         (409 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os05g0558400  Similar to Branched-chain-amino-acid aminotran...   766   0.0  
Os03g0106400  Similar to Branched-chain-amino-acid aminotran...   636   0.0  
Os04g0559400  Similar to Branched-chain-amino-acid aminotran...   505   e-143
Os03g0231600  Similar to Branched-chain-amino-acid aminotran...   472   e-133
Os10g0549500  Aminotransferase, class IV family protein           215   6e-56

>Os05g0558400 Similar to Branched-chain-amino-acid aminotransferase 3,
           chloroplast precursor (EC 2.6.1.42) (Atbcat-3)
          Length = 409

 Score =  766 bits (1979), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/374 (100%), Positives = 374/374 (100%)

Query: 36  IQIQNRLYSISSLPLKARGVRRCEASLASDYTKASEVADLDWENLGFGIVQTDYMYITKC 95
           IQIQNRLYSISSLPLKARGVRRCEASLASDYTKASEVADLDWENLGFGIVQTDYMYITKC
Sbjct: 36  IQIQNRLYSISSLPLKARGVRRCEASLASDYTKASEVADLDWENLGFGIVQTDYMYITKC 95

Query: 96  GQDGNFSEGEMIPFGPIALNPSSGVLNYGQGLFEGLKAYRTTDDSILLFRPEENALRMRT 155
           GQDGNFSEGEMIPFGPIALNPSSGVLNYGQGLFEGLKAYRTTDDSILLFRPEENALRMRT
Sbjct: 96  GQDGNFSEGEMIPFGPIALNPSSGVLNYGQGLFEGLKAYRTTDDSILLFRPEENALRMRT 155

Query: 156 GAERMCMPAPSVEQFVDAVKQTVLANKRWVPPTGKGSLYIRPLLMGSGAVLGLAPAPEYT 215
           GAERMCMPAPSVEQFVDAVKQTVLANKRWVPPTGKGSLYIRPLLMGSGAVLGLAPAPEYT
Sbjct: 156 GAERMCMPAPSVEQFVDAVKQTVLANKRWVPPTGKGSLYIRPLLMGSGAVLGLAPAPEYT 215

Query: 216 FIIFVSPVGNYFKEGLAPINLIVEDKFHRATPGGTGSVKTIGNYASVLMAQKIAKEKGYS 275
           FIIFVSPVGNYFKEGLAPINLIVEDKFHRATPGGTGSVKTIGNYASVLMAQKIAKEKGYS
Sbjct: 216 FIIFVSPVGNYFKEGLAPINLIVEDKFHRATPGGTGSVKTIGNYASVLMAQKIAKEKGYS 275

Query: 276 DVLYLDAVHKKYLEEVSSCNIFVVKGNVISTPAVKGTILPGITRKSIIDVALSKGFQVEE 335
           DVLYLDAVHKKYLEEVSSCNIFVVKGNVISTPAVKGTILPGITRKSIIDVALSKGFQVEE
Sbjct: 276 DVLYLDAVHKKYLEEVSSCNIFVVKGNVISTPAVKGTILPGITRKSIIDVALSKGFQVEE 335

Query: 336 RLVSVDELLEADEVFCTGTAVVVSPVGSITYQGKRVEYAGNKGVGVVSQQLYTSLTSLQM 395
           RLVSVDELLEADEVFCTGTAVVVSPVGSITYQGKRVEYAGNKGVGVVSQQLYTSLTSLQM
Sbjct: 336 RLVSVDELLEADEVFCTGTAVVVSPVGSITYQGKRVEYAGNKGVGVVSQQLYTSLTSLQM 395

Query: 396 GQAEDWLVWTVQLS 409
           GQAEDWLVWTVQLS
Sbjct: 396 GQAEDWLVWTVQLS 409



>Os03g0106400 Similar to Branched-chain-amino-acid aminotransferase 5,
           chloroplast precursor (EC 2.6.1.42) (Atbcat-5)
          Length = 405

 Score =  636 bits (1640), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/374 (81%), Positives = 337/374 (90%), Gaps = 1/374 (0%)

Query: 36  IQIQNRLYSISSLPLKARGVRRCEASLASDYTKASEVADLDWENLGFGIVQTDYMYITKC 95
           + I+N  YS+     KA     C+ASLA++Y + S VADLDWENLGFG+VQTD+MYI KC
Sbjct: 32  LPIKNHTYSVPPPFSKAHCAIGCQASLATNYMETSAVADLDWENLGFGLVQTDFMYIAKC 91

Query: 96  GQDGNFSEGEMIPFGPIALNPSSGVLNYGQGLFEGLKAYRTTDDSILLFRPEENALRMRT 155
           G DGNFS+GEM+PFGPI L+PS+GVLNYGQGLFEGLKAYR TD  ILLFRPEENA+RMR 
Sbjct: 92  GPDGNFSKGEMVPFGPIELSPSAGVLNYGQGLFEGLKAYRKTDGYILLFRPEENAIRMRN 151

Query: 156 GAERMCMPAPSVEQFVDAVKQTVLANKRWVPPTGKGSLYIRPLLMGSGAVLGLAPAPEYT 215
           GAERMCMPAP++EQFVDAVKQTVLANKRWVPPTGKGSLYIRPLLMGSGAVLGLAPAPEYT
Sbjct: 152 GAERMCMPAPTLEQFVDAVKQTVLANKRWVPPTGKGSLYIRPLLMGSGAVLGLAPAPEYT 211

Query: 216 FIIFVSPVGNYFKEGLAPINLIVEDKFHRATPGGTGSVKTIGNYASVLMAQKIAKEKGYS 275
           F+IFVSPVGNYFKEGLAPINLI+E+ FHRA PGGTG VKTIGNYASVL AQ+IAK+KGYS
Sbjct: 212 FMIFVSPVGNYFKEGLAPINLIIEENFHRAAPGGTGGVKTIGNYASVLKAQRIAKQKGYS 271

Query: 276 DVLYLDAVHKKYLEEVSSCNIFVVKGNVISTPAVKGTILPGITRKSIIDVALSKGFQVEE 335
           DVLYLDAVHKKYLEEVSSCNIF+VKGNVISTPA+KGTILPGITRKSI++VA  KGF VEE
Sbjct: 272 DVLYLDAVHKKYLEEVSSCNIFIVKGNVISTPAIKGTILPGITRKSILEVAQRKGFMVEE 331

Query: 336 RLVSVDELLEADEVFCTGTAVVVSPVGSITYQGKRVEYAGNKGVGVVSQQLYTSLTSLQM 395
           RLVSVDELLEADEVFCTGTAVVVSPVGSITY G+RVEY GN+GVGVV QQLYTSLTSLQM
Sbjct: 332 RLVSVDELLEADEVFCTGTAVVVSPVGSITYLGQRVEY-GNQGVGVVCQQLYTSLTSLQM 390

Query: 396 GQAEDWLVWTVQLS 409
           G  +D + WTV+L+
Sbjct: 391 GHVDDCMGWTVELN 404



>Os04g0559400 Similar to Branched-chain-amino-acid aminotransferase 5,
           chloroplast precursor (EC 2.6.1.42) (Atbcat-5)
          Length = 410

 Score =  505 bits (1300), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 232/358 (64%), Positives = 300/358 (83%), Gaps = 1/358 (0%)

Query: 52  ARGVRRCEASLASDYTKASEVADLDWENLGFGIVQTDYMYITKCGQDGNFSEGEMIPFGP 111
           AR  R      A+ YT  +E+ D +WE LGF  V TD+MY+ +C ++G F++GE++P+GP
Sbjct: 54  ARRSRWSTLVTAAYYTGTAELVDFNWETLGFQPVPTDFMYVMRCSEEGVFTKGELVPYGP 113

Query: 112 IALNPSSGVLNYGQGLFEGLKAYRTTDDSILLFRPEENALRMRTGAERMCMPAPSVEQFV 171
           I LNP++GVLNYGQGL EGL+A+R  D S+LLFRP+ENALRMR GA+R+CMPAPSVEQF+
Sbjct: 114 IELNPAAGVLNYGQGLLEGLRAHRKEDGSVLLFRPDENALRMRVGADRLCMPAPSVEQFL 173

Query: 172 DAVKQTVLANKRWVPPTGKGSLYIRPLLMGSGAVLGLAPAPEYTFIIFVSPVGNYFKEGL 231
           +A+K T+LANKRWVPPTGKGSLYIRPLL+GSGA+LG+APAPEYTF++F  PVG+YFK+GL
Sbjct: 174 EAIKLTILANKRWVPPTGKGSLYIRPLLIGSGAILGVAPAPEYTFVVFACPVGHYFKDGL 233

Query: 232 APINLIVEDKFHRATPGGTGSVKTIGNYASVLMAQKIAKEKGYSDVLYLDAVHKKYLEEV 291
           +PI+L+ E+++  A PGGTG +KTIGNYAS + A++ AKE+G+SDVLYLD VHKK++EE+
Sbjct: 234 SPISLLTEEEYQCAAPGGTGDIKTIGNYASAVYAKERAKERGHSDVLYLDPVHKKFVEEL 293

Query: 292 SSCNIFVVKGNVISTPAVKGTILPGITRKSIIDVALSKGFQVEERLVSVDELLEADEVFC 351
           SSCNIF+VK N+ISTP + GT+LPGITR+SII+ A S GFQVEE L+++DELL+ADEVFC
Sbjct: 294 SSCNIFMVKDNIISTPLLTGTVLPGITRRSIIEYARSLGFQVEECLITIDELLDADEVFC 353

Query: 352 TGTAVVVSPVGSITYQGKRVEYAGNKGVGVVSQQLYTSLTSLQMGQAEDWLVWTVQLS 409
           TGT+VV+S VG I YQG+RVEY GN+    VSQQLY++LT++Q G  ED + WTVQL+
Sbjct: 354 TGTSVVLSSVGCIVYQGRRVEY-GNQKFRTVSQQLYSALTAIQKGLVEDSMGWTVQLN 410



>Os03g0231600 Similar to Branched-chain-amino-acid aminotransferase 3,
           chloroplast precursor (EC 2.6.1.42) (Atbcat-3)
          Length = 415

 Score =  472 bits (1215), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 233/349 (66%), Positives = 283/349 (81%), Gaps = 5/349 (1%)

Query: 63  ASDYTKASEVADLDWENLGFGIVQTDYMYITKCG-QDGNFSEGEMIPFGPIALNPSSGVL 121
           ++D +      ++DW+NLGFG+  TDYMY+ +C  +DG FS GE+  +G I L+PSSGV+
Sbjct: 68  SADRSDEESGGEIDWDNLGFGLTPTDYMYVMRCSLEDGVFSRGELSRYGNIELSPSSGVI 127

Query: 122 NYGQGLFEGLKAYRTTDD--SILLFRPEENALRMRTGAERMCMPAPSVEQFVDAVKQTVL 179
           NYGQGLFEGLKAYR  +   S +LFRPEENA RM+ GAERMCMP+PSVEQFV AVKQTVL
Sbjct: 128 NYGQGLFEGLKAYRAANQQGSYMLFRPEENARRMQHGAERMCMPSPSVEQFVHAVKQTVL 187

Query: 180 ANKRWVPPTGKGSLYIRPLLMGSGAVLGLAPAPEYTFIIFVSPVGNYFKEGLAPINLIVE 239
           AN+RWVPP GKG+LYIRPLL+GSG +LGLAPAPEYTF+I+ +PVG YFKEGLAPINL+VE
Sbjct: 188 ANRRWVPPQGKGALYIRPLLIGSGPILGLAPAPEYTFLIYAAPVGTYFKEGLAPINLVVE 247

Query: 240 DKFHRATPGGTGSVKTIGNYASVLMAQKIAKEKGYSDVLYLDAVHKKYLEEVSSCNIFVV 299
           D  HRA PGGTG VKTI NYA VL AQ  AK +G++DVLYLDAVHK YLEE SSCN+F+V
Sbjct: 248 DSIHRAMPGGTGGVKTITNYAPVLKAQMDAKSRGFTDVLYLDAVHKTYLEEASSCNLFIV 307

Query: 300 KGNVISTPAVKGTILPGITRKSIIDVALSKGFQVEERLVSVDELLEADEVFCTGTAVVVS 359
           K  V++TPA  GTILPGITRKS+I++A  +G+QVEERLVS+D+L+ ADEVFCTGTAVVV+
Sbjct: 308 KDGVVATPATVGTILPGITRKSVIELARDRGYQVEERLVSIDDLVGADEVFCTGTAVVVA 367

Query: 360 PVGSITYQGKRVEYAGNKGVGVVSQQLYTSLTSLQMGQAEDWLVWTVQL 408
           PV S+TY G+R E+    G   +SQ L+T+LTS+QMG AED   WTV +
Sbjct: 368 PVSSVTYHGQRYEF--RTGHDTLSQTLHTTLTSIQMGLAEDKKGWTVAI 414



>Os10g0549500 Aminotransferase, class IV family protein
          Length = 118

 Score =  215 bits (547), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 108/110 (98%), Positives = 109/110 (99%)

Query: 300 KGNVISTPAVKGTILPGITRKSIIDVALSKGFQVEERLVSVDELLEADEVFCTGTAVVVS 359
           +GNVISTPAVKGTILPGITRKSIIDVALSKGFQVEERLVSVDELLEADEVFCTGTAVVVS
Sbjct: 9   QGNVISTPAVKGTILPGITRKSIIDVALSKGFQVEERLVSVDELLEADEVFCTGTAVVVS 68

Query: 360 PVGSITYQGKRVEYAGNKGVGVVSQQLYTSLTSLQMGQAEDWLVWTVQLS 409
           PVGSITYQGKRVEYAGNKGVGVVSQQLYTSLTSLQMGQAEDWL WTVQLS
Sbjct: 69  PVGSITYQGKRVEYAGNKGVGVVSQQLYTSLTSLQMGQAEDWLGWTVQLS 118



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,790,505
Number of extensions: 556709
Number of successful extensions: 1106
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1100
Number of HSP's successfully gapped: 6
Length of query: 409
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 306
Effective length of database: 11,657,759
Effective search space: 3567274254
Effective search space used: 3567274254
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)