BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0534100 Os05g0534100|Os05g0534100
(249 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0534100 Acid phosphatase/vanadium-dependent haloperoxi... 295 3e-80
Os01g0901800 Acid phosphatase/vanadium-dependent haloperoxi... 79 4e-15
Os04g0486900 Acid phosphatase/vanadium-dependent haloperoxi... 78 5e-15
Os08g0127500 Acid phosphatase/vanadium-dependent haloperoxi... 74 1e-13
>Os05g0534100 Acid phosphatase/vanadium-dependent haloperoxidase related family
protein
Length = 249
Score = 295 bits (754), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 146/173 (84%)
Query: 77 ELPDLXXXXXXXXXXXXXXXRIGTLLMSTTAAAVTKARENPYILALAANPTFVSGLXXXX 136
ELPDL RIGTLLMSTTAAAVTKARENPYILALAANPTFVSGL
Sbjct: 77 ELPDLAVGAGAAATAAGGGARIGTLLMSTTAAAVTKARENPYILALAANPTFVSGLVAWA 136
Query: 137 XXXXXXXXLTSFVERRWDLRMLFSSGGMPSSHTALCTALTASVALCHGVSDSLFPVCLGF 196
LTSFVERRWDLRMLFSSGGMPSSHTALCTALTASVALCHGVSDSLFPVCLGF
Sbjct: 137 VAQAAKVVLTSFVERRWDLRMLFSSGGMPSSHTALCTALTASVALCHGVSDSLFPVCLGF 196
Query: 197 TLIVMYDATGVRRHAGMQAELICQNDSEIACYLGYSIRSLRTCFKAIQLVKEN 249
TLIVMYDATGVRRHAGMQAELICQNDSEIACYLGYSIRSLRTCFKAIQLVKEN
Sbjct: 197 TLIVMYDATGVRRHAGMQAELICQNDSEIACYLGYSIRSLRTCFKAIQLVKEN 249
>Os01g0901800 Acid phosphatase/vanadium-dependent haloperoxidase related family
protein
Length = 171
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 145 LTSFVERRWDLRMLFSSGGMPSSHTALCTALTASVALCHGVSDSLFPVCLGFTLIVMYDA 204
+T + E RWD + L SGGMPSSH+A TAL ++ G +LF F +VMYDA
Sbjct: 44 VTRYKENRWDPKQLIGSGGMPSSHSATVTALAVAIGFQDGFGCALFATAAIFASVVMYDA 103
Query: 205 TGVRRHAGMQAELICQ 220
+G+R HAG QAE++ Q
Sbjct: 104 SGIRLHAGKQAEVLNQ 119
>Os04g0486900 Acid phosphatase/vanadium-dependent haloperoxidase related family
protein
Length = 153
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%)
Query: 146 TSFVERRWDLRMLFSSGGMPSSHTALCTALTASVALCHGVSDSLFPVCLGFTLIVMYDAT 205
T F E+RWD R L +SGGMPSSH+A TAL ++ + G + F + +VM+DA
Sbjct: 30 TWFKEKRWDARQLIASGGMPSSHSATVTALAVAIGIQEGYRSATFATSVIIACVVMHDAF 89
Query: 206 GVRRHAGMQAELICQ 220
GVR HAG QAE++ Q
Sbjct: 90 GVRLHAGKQAEVLNQ 104
>Os08g0127500 Acid phosphatase/vanadium-dependent haloperoxidase related family
protein
Length = 184
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 46/75 (61%)
Query: 146 TSFVERRWDLRMLFSSGGMPSSHTALCTALTASVALCHGVSDSLFPVCLGFTLIVMYDAT 205
T + E RWD + L SGGMPSSH+A AL +V L G SLF F +VMYDA
Sbjct: 55 TWYKENRWDAKQLVGSGGMPSSHSATVVALAVAVGLQEGFGSSLFATAAIFASVVMYDAF 114
Query: 206 GVRRHAGMQAELICQ 220
GVR HAG QAE++ Q
Sbjct: 115 GVRLHAGKQAEVLNQ 129
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.134 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,500,664
Number of extensions: 140053
Number of successful extensions: 327
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 327
Number of HSP's successfully gapped: 4
Length of query: 249
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 151
Effective length of database: 11,918,829
Effective search space: 1799743179
Effective search space used: 1799743179
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 155 (64.3 bits)