BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0529000 Os05g0529000|AK059220
         (273 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os05g0529000  Protein of unknown function DUF502 family protein   486   e-138
Os02g0269000  Protein of unknown function DUF502 family protein   379   e-105
Os01g0867900  Protein of unknown function DUF502 family protein   333   9e-92
Os05g0437200  Protein of unknown function DUF502 family protein   317   6e-87
Os12g0482600  Protein of unknown function DUF502 family protein   184   6e-47

>Os05g0529000 Protein of unknown function DUF502 family protein
          Length = 273

 Score =  486 bits (1251), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 243/273 (89%), Positives = 243/273 (89%)

Query: 1   MGDEKSPLSQMGSRDRDRELLIPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREAFHK 60
           MGDEKSPLSQMGSRDRDRELLIPV                              REAFHK
Sbjct: 1   MGDEKSPLSQMGSRDRDRELLIPVSGGGSAPGDGDGDGDRAASSSASAALSSSSREAFHK 60

Query: 61  VVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINMFGLGFITSVTF 120
           VVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINMFGLGFITSVTF
Sbjct: 61  VVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINMFGLGFITSVTF 120

Query: 121 IFVVGVFMSSWVGASVLSLGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFKEVVIIR 180
           IFVVGVFMSSWVGASVLSLGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFKEVVIIR
Sbjct: 121 IFVVGVFMSSWVGASVLSLGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFKEVVIIR 180

Query: 181 HPRIGEYAFGFITSSVSLQSYTGQEELYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREG 240
           HPRIGEYAFGFITSSVSLQSYTGQEELYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREG
Sbjct: 181 HPRIGEYAFGFITSSVSLQSYTGQEELYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREG 240

Query: 241 IEIVVSGGMSMPQILSTLDPQTILGDRTGASRS 273
           IEIVVSGGMSMPQILSTLDPQTILGDRTGASRS
Sbjct: 241 IEIVVSGGMSMPQILSTLDPQTILGDRTGASRS 273



>Os02g0269000 Protein of unknown function DUF502 family protein
          Length = 291

 Score =  379 bits (973), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 180/219 (82%), Positives = 197/219 (89%)

Query: 55  REAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINMFGLGF 114
           REAFHKVV SWASKKFMTGCVILFPIA+TFYITWWF  FVDGFFSPIYA LGIN+FGLGF
Sbjct: 73  REAFHKVVHSWASKKFMTGCVILFPIAVTFYITWWFFRFVDGFFSPIYAHLGINIFGLGF 132

Query: 115 ITSVTFIFVVGVFMSSWVGASVLSLGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFK 174
           +TS++FIFVVGVFMSSW+GAS+L LGEW IKRMP VRHIYNASKQISAAISPDQNK AFK
Sbjct: 133 VTSISFIFVVGVFMSSWLGASILGLGEWFIKRMPFVRHIYNASKQISAAISPDQNKHAFK 192

Query: 175 EVVIIRHPRIGEYAFGFITSSVSLQSYTGQEELYCVYVPTNHLYIGDIFMVNSKDVIRPN 234
           EVVIIRHPRIGEYAFGFITS V LQ Y+ +E++YCVYVPTNHLYIGDIF+VNS DVIRPN
Sbjct: 193 EVVIIRHPRIGEYAFGFITSEVLLQDYSSEEQMYCVYVPTNHLYIGDIFLVNSSDVIRPN 252

Query: 235 LSVREGIEIVVSGGMSMPQILSTLDPQTILGDRTGASRS 273
           LSVREGIEIVVSGGMSMPQ+LS ++ +     R  +SRS
Sbjct: 253 LSVREGIEIVVSGGMSMPQVLSIVETEQNQWSRMRSSRS 291



>Os01g0867900 Protein of unknown function DUF502 family protein
          Length = 259

 Score =  333 bits (854), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 148/206 (71%), Positives = 186/206 (90%)

Query: 55  REAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINMFGLGF 114
           R+A   V++SW S+KFMTGCV+LFP+A+TF+ITWWFI FVDGFFSP+YA+LGI++FGLGF
Sbjct: 39  RKACCAVLQSWVSRKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYAKLGIDIFGLGF 98

Query: 115 ITSVTFIFVVGVFMSSWVGASVLSLGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFK 174
           +TS+ FIF+VG+F+SSWVG+++  +GEW IK+MP VRHIY+ASKQ+S AISPDQN  AFK
Sbjct: 99  LTSLVFIFLVGIFVSSWVGSTIFWVGEWFIKKMPFVRHIYSASKQVSTAISPDQNTTAFK 158

Query: 175 EVVIIRHPRIGEYAFGFITSSVSLQSYTGQEELYCVYVPTNHLYIGDIFMVNSKDVIRPN 234
           EV IIRHPRIGEYAFGFITS+V LQ+  G EEL  VYVPTNHLYIGDIF+VNS+++IRPN
Sbjct: 159 EVAIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPN 218

Query: 235 LSVREGIEIVVSGGMSMPQILSTLDP 260
           LS+REGIEI+VSGGM+MPQ++++L+P
Sbjct: 219 LSIREGIEIIVSGGMTMPQVIASLEP 244



>Os05g0437200 Protein of unknown function DUF502 family protein
          Length = 260

 Score =  317 bits (812), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 144/218 (66%), Positives = 183/218 (83%)

Query: 55  REAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINMFGLGF 114
           R+A   V++SW S+KFMTGCV+LFP+A+TF+ITWWF+ FVDGFFSP+YA+LG ++FGLGF
Sbjct: 39  RKACFAVLQSWVSRKFMTGCVVLFPVAVTFFITWWFVKFVDGFFSPLYAKLGFDIFGLGF 98

Query: 115 ITSVTFIFVVGVFMSSWVGASVLSLGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFK 174
           +TS+ FIF+VG+F+SSWVG++V  +GEW IK+MP VRHIY+ASKQ+S A+SPDQN  AFK
Sbjct: 99  LTSLLFIFLVGIFVSSWVGSTVFWIGEWFIKKMPFVRHIYSASKQVSTAVSPDQNTTAFK 158

Query: 175 EVVIIRHPRIGEYAFGFITSSVSLQSYTGQEELYCVYVPTNHLYIGDIFMVNSKDVIRPN 234
           EV II HPRIGEYAFGFITS++ LQ+  G EEL  VYVPTNHLYIGDIF+V S+++IRPN
Sbjct: 159 EVAIISHPRIGEYAFGFITSTMILQTDKGDEELCSVYVPTNHLYIGDIFLVRSEEIIRPN 218

Query: 235 LSVREGIEIVVSGGMSMPQILSTLDPQTILGDRTGASR 272
           LS+REGIEI+VSGGM+MPQ+++        G  T  +R
Sbjct: 219 LSIREGIEIIVSGGMTMPQVIAAPGQTPHKGQSTRLNR 256



>Os12g0482600 Protein of unknown function DUF502 family protein
          Length = 178

 Score =  184 bits (467), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 88/112 (78%), Positives = 98/112 (87%)

Query: 56  EAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINMFGLGFI 115
           EAF +V+RSWA KKFMTGCVIL PIAITFY TWWFI  VDGFFSPIY  LGIN+FGLGF 
Sbjct: 67  EAFSRVIRSWAWKKFMTGCVILLPIAITFYTTWWFIRVVDGFFSPIYIHLGINVFGLGFA 126

Query: 116 TSVTFIFVVGVFMSSWVGASVLSLGEWIIKRMPLVRHIYNASKQISAAISPD 167
           TS+TFIF+ GVFMSSW+GAS+L LGE  IK+ PLVRHIY++SKQISAAISPD
Sbjct: 127 TSITFIFLAGVFMSSWLGASLLGLGELFIKKTPLVRHIYSSSKQISAAISPD 178



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.326    0.140    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,586,052
Number of extensions: 265663
Number of successful extensions: 659
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 658
Number of HSP's successfully gapped: 5
Length of query: 273
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 174
Effective length of database: 11,866,615
Effective search space: 2064791010
Effective search space used: 2064791010
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 155 (64.3 bits)