Os01g0867900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF502 family protein.
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Os01g0867900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF502 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.07 | 0.262 | 11.8 | -1.07 | 0.956 | 0.452 | -0.2 | -0.319 | -0.095 | 1.1 | 20.2 | 106 | -- | -- |
| 31.42 | 0.261 | 11.8 | -1.02 | 0.955 | 0.467 | -0.0724 | -- | -0.0811 | 1.1 | 20.2 | 140 | -- | -- |
| 31.21 | 0.26 | 11.8 | -1.05 | 0.958 | 0.457 | -- | -0.246 | -0.0916 | 1.09 | 20.24 | 102 | -- | -- |
| 31.42 | 0.261 | 11.8 | -1.02 | 0.956 | 0.488 | -- | -- | -0.0845 | 1.13 | 20.26 | 140 | -- | -- |
| 73.66 | 0.4 | 11.8 | -1.14 | -- | 0.6 | -- | -0.24 | -0.135 | -- | 20.7 | 960 | -- | -- |
| 39.93 | 0.296 | 11.8 | -0.886 | 0.856 | -- | -0.0827 | -- | 0.00364 | 1.04 | -- | -- | -- | -- |
| 39.96 | 0.296 | 11.8 | -0.883 | 0.856 | -- | -- | -- | 0.0041 | 1.04 | -- | -- | -- | -- |
| 64.91 | 0.375 | 11.8 | -1.09 | -- | 0.727 | -- | -- | -0.246 | -- | 24.82 | 976 | -- | -- |
| 57.15 | 0.354 | 11.7 | -- | 0.906 | 0.28 | -- | -- | 0.0581 | 0.998 | 20.3 | 108 | -- | -- |
| 85.48 | 0.432 | 11.7 | -0.851 | -- | -- | -- | -- | 0.0208 | -- | -- | -- | -- | -- |
| 60.53 | 0.364 | 11.7 | -- | 0.841 | -- | -- | -- | 0.102 | 0.995 | -- | -- | -- | -- |
| 81.14 | 0.42 | 11.7 | -- | -- | -0.558 | -- | -- | 0.181 | -- | 27.6 | 10 | -- | -- |
| 104.59 | 0.477 | 11.7 | -- | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.30 | temperature | 20 | 90 | > th | dose independent | sin | 11 | NA |
| 2 | 29.38 | temperature | 20 | 90 | < th | dose independent | sin | 11 | NA |
| 11 | 29.65 | temperature | 20 | 90 | < th | dose independent | rect. | 17 | 16 |
| 25 | 29.78 | temperature | 25 | 270 | < th | dose dependent | sin | 13 | NA |
| 28 | 29.82 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 14 |
| 36 | 29.90 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 12 |
| 37 | 29.91 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 14 |
| 43 | 29.96 | temperature | 20 | 90 | < th | dose independent | rect. | 17 | 12 |
| 45 | 29.96 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 14 |
| 88 | 30.22 | temperature | 20 | 90 | < th | dose independent | rect. | 13 | 22 |
| 96 | 30.23 | temperature | 25 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 98 | 30.24 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 10 |
| 126 | 30.30 | temperature | 25 | 10 | < th | dose dependent | sin | 10 | NA |
| 169 | 30.36 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 180 | 30.39 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 6 |
| 263 | 30.56 | temperature | 15 | 270 | > th | dose dependent | sin | 12 | NA |
| 265 | 30.56 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 16 |
| 312 | 30.65 | temperature | 20 | 30 | > th | dose independent | rect. | 17 | 23 |
| 353 | 30.72 | temperature | 20 | 270 | > th | dose independent | rect. | 9 | 23 |
| 427 | 30.86 | temperature | 20 | 90 | < th | dose independent | rect. | 16 | 22 |
| 468 | 30.91 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 528 | 31.02 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 5 |
| 600 | 31.12 | temperature | 20 | 90 | < th | dose independent | rect. | 5 | 23 |
| 604 | 31.13 | temperature | 20 | 90 | > th | dose independent | no | NA | NA |
| 628 | 31.16 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 8 |
| 655 | 31.20 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 23 |
| 657 | 31.21 | temperature | 20 | 90 | < th | dose independent | no | NA | NA |
| 703 | 31.27 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 23 |
| 710 | 31.28 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 19 |
| 713 | 31.28 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 23 |
| 723 | 31.29 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 732 | 31.30 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 2 |
| 786 | 31.34 | temperature | 20 | 30 | < th | dose independent | rect. | 23 | 23 |
| 790 | 31.35 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 830 | 31.38 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 20 |
| 834 | 31.39 | temperature | 20 | 30 | < th | dose independent | rect. | 1 | 23 |
| 835 | 31.39 | temperature | 20 | 30 | < th | dose independent | rect. | 3 | 23 |
| 845 | 31.40 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 956 | 31.52 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 22 |