Os02g0269000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF502 family protein.
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Os02g0269000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF502 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.1 | 0.2 | 9.22 | 0.187 | 0.128 | 0.752 | -0.701 | 0.433 | 0.0829 | 6.36 | 21.5 | 2796 | -- | -- |
| 18.24 | 0.199 | 9.22 | 0.219 | 0.109 | 0.635 | -0.671 | -- | 0.0654 | 6.64 | 22.3 | 2754 | -- | -- |
| 19.15 | 0.204 | 9.22 | 0.162 | 0.138 | 0.735 | -- | 0.382 | 0.0743 | 5.32 | 21.74 | 3030 | -- | -- |
| 19.31 | 0.205 | 9.23 | 0.133 | 0.126 | 0.661 | -- | -- | 0.0519 | 6.08 | 22.1 | 2689 | -- | -- |
| 20.01 | 0.208 | 9.22 | 0.233 | -- | 0.697 | -- | 0.341 | 0.0819 | -- | 22 | 2829 | -- | -- |
| 32.57 | 0.268 | 9.18 | 0.441 | 0.154 | -- | -0.712 | -- | 0.285 | 5.94 | -- | -- | -- | -- |
| 33.71 | 0.272 | 9.18 | 0.434 | 0.156 | -- | -- | -- | 0.287 | 4.95 | -- | -- | -- | -- |
| 20.12 | 0.209 | 9.24 | 0.13 | -- | 0.668 | -- | -- | 0.0506 | -- | 22.1 | 2715 | -- | -- |
| 19.49 | 0.206 | 9.24 | -- | 0.138 | 0.73 | -- | -- | 0.0359 | 5.38 | 21.76 | 3029 | -- | -- |
| 34.99 | 0.276 | 9.18 | 0.439 | -- | -- | -- | -- | 0.291 | -- | -- | -- | -- | -- |
| 38.67 | 0.291 | 9.19 | -- | 0.163 | -- | -- | -- | 0.239 | 4.87 | -- | -- | -- | -- |
| 20.38 | 0.21 | 9.24 | -- | -- | 0.739 | -- | -- | 0.035 | -- | 21.7 | 2826 | -- | -- |
| 40.08 | 0.295 | 9.19 | -- | -- | -- | -- | -- | 0.242 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.37 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 3 | 17.38 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 7 |
| 20 | 17.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 9 |
| 35 | 17.48 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 93 | 17.54 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 137 | 17.59 | temperature | 10 | 1440 | > th | dose dependent | sin | 9 | NA |
| 156 | 17.61 | temperature | 30 | 1440 | < th | dose dependent | sin | 10 | NA |
| 266 | 17.73 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |