BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0490200 Os05g0490200|AK101147
(384 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0490200 Protein of unknown function DUF1692 domain con... 756 0.0
Os04g0455900 Protein of unknown function DUF1692 domain con... 327 1e-89
Os03g0784400 Protein of unknown function DUF1692 domain con... 192 5e-49
AK110396 142 4e-34
Os03g0321400 Protein of unknown function DUF1692 domain con... 135 4e-32
Os07g0524100 Thioredoxin domain 2 containing protein 79 4e-15
>Os05g0490200 Protein of unknown function DUF1692 domain containing protein
Length = 384
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/384 (95%), Positives = 366/384 (95%)
Query: 1 MEGFLQKLKGLDAYPKVNEDFYKRXXXXXXXXXXXXXXXXXXFVSETRSYFYSATETKLV 60
MEGFLQKLKGLDAYPKVNEDFYKR FVSETRSYFYSATETKLV
Sbjct: 1 MEGFLQKLKGLDAYPKVNEDFYKRTLSGGVVTVVASVVMLLLFVSETRSYFYSATETKLV 60
Query: 61 VDTSRGERLRVNFDVTFPSVPCTLLSVDTMDISGEQHHDIRHDIEKRRLDAHGNVIEARK 120
VDTSRGERLRVNFDVTFPSVPCTLLSVDTMDISGEQHHDIRHDIEKRRLDAHGNVIEARK
Sbjct: 61 VDTSRGERLRVNFDVTFPSVPCTLLSVDTMDISGEQHHDIRHDIEKRRLDAHGNVIEARK 120
Query: 121 EGIGGAKIESPLQKHGGRLSKGEEYCGTCYGAEESDEQCCNSCEEVREAYKKKGWALTNP 180
EGIGGAKIESPLQKHGGRLSKGEEYCGTCYGAEESDEQCCNSCEEVREAYKKKGWALTNP
Sbjct: 121 EGIGGAKIESPLQKHGGRLSKGEEYCGTCYGAEESDEQCCNSCEEVREAYKKKGWALTNP 180
Query: 181 DLIDQCTREDFVERVKTQQGEGCNVHGFLDVSKVAGNLHFAPGKGFYESNINVPELSALE 240
DLIDQCTREDFVERVKTQQGEGCNVHGFLDVSKVAGNLHFAPGKGFYESNINVPELSALE
Sbjct: 181 DLIDQCTREDFVERVKTQQGEGCNVHGFLDVSKVAGNLHFAPGKGFYESNINVPELSALE 240
Query: 241 HGFNITHKINKLSFGTEFPGVVNPLDGAQWTQPASDGTYQYFIKVVPTIYTDLRGRKIHS 300
HGFNITHKINKLSFGTEFPGVVNPLDGAQWTQPASDGTYQYFIKVVPTIYTDLRGRKIHS
Sbjct: 241 HGFNITHKINKLSFGTEFPGVVNPLDGAQWTQPASDGTYQYFIKVVPTIYTDLRGRKIHS 300
Query: 301 NQFSVTEHFRDGNIRPKPQPGVFFFYDFSPIKVIFTEENSSLLHYLTNLCAIVGGVFTVS 360
NQFSVTEHFRDGNIRPKPQPGVFFFYDFSPIKVIFTEENSSLLHYLTNLCAIVGGVFTVS
Sbjct: 301 NQFSVTEHFRDGNIRPKPQPGVFFFYDFSPIKVIFTEENSSLLHYLTNLCAIVGGVFTVS 360
Query: 361 GIIDSFIYHGQKALKKKMELGKYR 384
GIIDSFIYHGQKALKKKMELGKYR
Sbjct: 361 GIIDSFIYHGQKALKKKMELGKYR 384
>Os04g0455900 Protein of unknown function DUF1692 domain containing protein
Length = 253
Score = 327 bits (837), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 145/246 (58%), Positives = 188/246 (76%), Gaps = 1/246 (0%)
Query: 1 MEGFLQKLKGLDAYPKVNEDFYKRXXXXXXXXXXXXXXXXXXFVSETRSYFYSATETKLV 60
MEG L KL+ LDAYPKVNEDFY R FVSE R Y ++ TET L
Sbjct: 1 MEGLLSKLRSLDAYPKVNEDFYSRTLSGGIITLASSVVMLLLFVSELRLYLHAVTETTLR 60
Query: 61 VDTSRGERLRVNFDVTFPSVPCTLLSVDTMDISGEQHHDIRHDIEKRRLDAHGNVIEARK 120
VDTSRGE LR+NFDVTFP++ C+++S+D MDISG++H D++HDI K+R+D HGNVI ++
Sbjct: 61 VDTSRGETLRINFDVTFPALQCSIISLDAMDISGQEHLDVKHDIFKQRIDVHGNVIATKQ 120
Query: 121 EGIGGAKIESPLQKHGGRLSKGEEYCGTCYGAEESDEQCCNSCEEVREAYKKKGWALTNP 180
+ +GG K+E PLQ+HGGRL E YCG+CYGAEESDEQCCNSCE+VREAY+KKGW ++NP
Sbjct: 121 DAVGGMKVEQPLQRHGGRLEHNETYCGSCYGAEESDEQCCNSCEDVREAYRKKGWGVSNP 180
Query: 181 DLIDQCTREDFVERVKTQQGEGCNVHGFLDVSKVAGNLHFAPGKGFYESNINVPELSALE 240
DLIDQC RE F++ +K ++GEGCN++GFL+V+KVAGN HFAPGK F ++N++V +L +
Sbjct: 181 DLIDQCKREGFLQSIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQKANVHVHDLLPFQ 240
Query: 241 H-GFNI 245
FN+
Sbjct: 241 KDSFNV 246
>Os03g0784400 Protein of unknown function DUF1692 domain containing protein
Length = 350
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 125/379 (32%), Positives = 187/379 (49%), Gaps = 43/379 (11%)
Query: 3 GFLQKLKGLDAYPKVNEDFYKRXXXXXXXXXXXXXXXXXXFVSETRSYFYSATETKLVVD 62
G + LK +A+P + K+ F E + Y + T ++ VD
Sbjct: 2 GRIPSLKNFNAFPHAEDHLLKKTYSGAIVTIFGLIIMVTLFAHELKFYLTTYTVHQMSVD 61
Query: 63 TSRGERLRVNFDVTFPSVPCTLLSVDTMDISGEQHHDIRHDIEKRRLDAHGNVIEARKEG 122
RGE L ++ +++FPS+PC +LSVD +D+SG+ D+ +I K RLD +G++I
Sbjct: 62 LKRGETLPIHINMSFPSLPCEVLSVDAIDMSGKHEVDLHTNIWKLRLDKYGHII------ 115
Query: 123 IGGAKIESPLQKHGGRLSKGEEYCGTCYGAEESDEQCCNSCEEVREAYKKKGWALTNPDL 182
G EY E + E E +KK N D
Sbjct: 116 -------------------GTEYLNDLVEKEHGTHNHDHDHEH--EDEQKKQEHTFNED- 153
Query: 183 IDQCTREDFVERVK--TQQGEGCNVHGFLDVSKVAGNLHFAPGKGFYESNINVPE--LSA 238
E V+ VK + GEGC V+G LDV +VAGN H + + NI V E
Sbjct: 154 -----AEKMVKSVKQAMENGEGCRVYGVLDVQRVAGNFHIS----VHGLNIFVAEKIFDG 204
Query: 239 LEHGFNITHKINKLSFGTEFPGVVNPLDGAQWTQPASDGTYQYFIKVVPTIYTDLRGRKI 298
H N++H I+ LSFG ++PG+ NPLD + GT++Y+IK+VPT Y L + +
Sbjct: 205 SSH-VNVSHIIHDLSFGPKYPGIHNPLDETTRILHDTSGTFKYYIKIVPTEYRYLSKQVL 263
Query: 299 HSNQFSVTEHFRDGNIRPKPQ-PGVFFFYDFSPIKVIFTEENSSLLHYLTNLCAIVGGVF 357
+NQFSVTE+F + P V+F YD SPI V EE + LH+LT LCA++GG F
Sbjct: 264 PTNQFSVTEYFVPKRATDRSAWPAVYFLYDLSPITVTIKEERRNFLHFLTRLCAVLGGTF 323
Query: 358 TVSGIIDSFIYHGQKALKK 376
++G++D ++Y +++ K
Sbjct: 324 AMTGMLDRWMYRLIESVTK 342
>AK110396
Length = 508
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 175/415 (42%), Gaps = 95/415 (22%)
Query: 7 KLKGLDAYPKVNEDFYKRXXXXXXXXXXXXXXXXXXFVSETRSYFYSATETKLVVDTSRG 66
++ + AY + + ++ + E Y TK+ VD +R
Sbjct: 5 RISEISAYKRADAHLTRQTTRGAVVTLLGVILGVTLAIHEITWYLSGKGTTKMAVDLARR 64
Query: 67 ERLRVNFDVTFPSVPCTLLSVDTMDISGEQHHDIRHD----IEKRRLDAHGNVIEARKEG 122
L ++ D+TFP++PC LSVD MD SG D H + K RLD G I
Sbjct: 65 HDLNIHVDITFPAIPCAGLSVDVMDASGTAGSDANHAKGVHLHKMRLDTRGRRI------ 118
Query: 123 IGGAKIESPLQKHGGRLSKGEEYCGTCYGAEESDEQCCNSCEEVREAYKKKGWALTNPDL 182
GG+ +GE Y +S + ++ V + G A+T
Sbjct: 119 -------------GGK--EGE------YVTPQSQKMVHDASGTVMQV--DLGAAMTQMSD 155
Query: 183 IDQCTREDFVERVKTQQGEGCNVHGFLDVSKVAGNLHFAPGKGFYESNINV-PEL---SA 238
+D + Q+ EGC V+G + V +VAG LHFA + +S I+V P++
Sbjct: 156 MDD----------EMQKHEGCRVYGEVSVRRVAGRLHFAVHQ---QSFIDVLPQMLTGHV 202
Query: 239 LEHGFNITHKINKLSFGTEFPGVVNPLDGAQWTQPASD--GTYQYFIKVVPTIYTDLRGR 296
L N++H I+K++FG E+PG VNPLDG D Y+YF+K+VPT Y G
Sbjct: 203 LPKLTNMSHIIHKVAFGPEYPGQVNPLDGFTRINLPGDVPRAYKYFLKIVPTEYYTRVGM 262
Query: 297 KIHSNQFSVTEH---FRDGNIRPKPQPG-------------------------------- 321
+ S+Q+SV E+ R G P +P
Sbjct: 263 VLESSQYSVGEYAMPLRSGPGVPTQKPSDKDKEGHTHKIAEGTGAEPTDGSAAAAGDSHP 322
Query: 322 --------VFFFYDFSPIKVIFTEENSSLLHYLTNLCAIVGGVFTVSGIIDSFIY 368
V F YD SPI + SSLLH++ LCA+VGGV +V+ + D ++
Sbjct: 323 TSTVQNAFVDFSYDLSPIVMTINSNPSSLLHFIVRLCAVVGGVLSVTRMADKIVH 377
>Os03g0321400 Protein of unknown function DUF1692 domain containing protein
Length = 83
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 74/81 (91%)
Query: 302 QFSVTEHFRDGNIRPKPQPGVFFFYDFSPIKVIFTEENSSLLHYLTNLCAIVGGVFTVSG 361
QFSVTEHFR+ P+P PGV+FFY+FSPIKV FTEEN+SLLH+LTN+CAIVGG+FTV+G
Sbjct: 1 QFSVTEHFREAIGYPRPPPGVYFFYEFSPIKVDFTEENTSLLHFLTNICAIVGGIFTVAG 60
Query: 362 IIDSFIYHGQKALKKKMELGK 382
IIDSF+YHG +A+KKKME+GK
Sbjct: 61 IIDSFVYHGHRAIKKKMEIGK 81
>Os07g0524100 Thioredoxin domain 2 containing protein
Length = 485
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 19/195 (9%)
Query: 202 GCNVHGFLDVSKVAGNLHFAPGKG---FYESNINVPE-LSALEHGFNITHKI-NKLSFGT 256
GC + GF+ V KV G++ + G F S INV ++ G ++ K+ N+L T
Sbjct: 294 GCRIEGFVRVKKVPGSVVISARSGSHSFDPSQINVSHYVTQFSFGKRLSAKMFNELKRLT 353
Query: 257 EFPG-VVNPLDGAQWTQPASDG----TYQYFIKVVPTIYTDLRGRKIHSNQFSVTEHF-- 309
+ G + L G + D T ++++++V T LR K + + E +
Sbjct: 354 PYVGGHHDRLAGQSYIVKHGDVNANVTIEHYLQIVKTELVTLRSSK----ELKLVEEYEY 409
Query: 310 --RDGNIRPKPQPGVFFFYDFSPIKVIFTEENSSLLHYLTNLCAIVGGVFTVSGIIDSFI 367
+ P V F ++ SP++V+ TE S H++TN+CAI+GGVFTV+GI+DS I
Sbjct: 410 TAHSSLVHSFYVPVVKFHFEPSPMQVLVTELPKSFSHFITNVCAIIGGVFTVAGILDS-I 468
Query: 368 YHGQKALKKKMELGK 382
+H L KK+ELGK
Sbjct: 469 FHNTLRLVKKVELGK 483
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.138 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,164,323
Number of extensions: 572977
Number of successful extensions: 1114
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1105
Number of HSP's successfully gapped: 6
Length of query: 384
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 281
Effective length of database: 11,657,759
Effective search space: 3275830279
Effective search space used: 3275830279
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)