Os05g0490200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1692 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0490200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF1692 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.95 | 0.22 | 10.4 | -0.512 | 0.029 | -0.214 | 0.0866 | 0.643 | 0.152 | 13.4 | 19.9 | 16 | -- | -- |
| 23.62 | 0.228 | 10.4 | -0.409 | 0.0145 | -0.252 | -0.203 | -- | 0.172 | 14.5 | 20 | 17 | -- | -- |
| 21.97 | 0.218 | 10.4 | -0.505 | 0.0286 | -0.216 | -- | 0.612 | 0.153 | 13.5 | 19.84 | 18 | -- | -- |
| 23.73 | 0.227 | 10.4 | -0.408 | 0.0185 | -0.256 | -- | -- | 0.171 | 12.5 | 20 | 14 | -- | -- |
| 22.02 | 0.219 | 10.4 | -0.507 | -- | -0.226 | -- | 0.606 | 0.151 | -- | 19.83 | 18 | -- | -- |
| 26.13 | 0.24 | 10.4 | -0.34 | 0.0744 | -- | -0.17 | -- | 0.218 | 13.1 | -- | -- | -- | -- |
| 26.25 | 0.24 | 10.4 | -0.346 | 0.0745 | -- | -- | -- | 0.217 | 13 | -- | -- | -- | -- |
| 23.74 | 0.227 | 10.4 | -0.412 | -- | -0.261 | -- | -- | 0.171 | -- | 19.92 | 14 | -- | -- |
| 27.99 | 0.246 | 10.4 | -- | 0.0371 | -0.188 | -- | -- | 0.227 | 12.2 | 19.99 | 14 | -- | -- |
| 26.6 | 0.241 | 10.4 | -0.349 | -- | -- | -- | -- | 0.216 | -- | -- | -- | -- | -- |
| 29.42 | 0.254 | 10.4 | -- | 0.0803 | -- | -- | -- | 0.256 | 13.2 | -- | -- | -- | -- |
| 28.05 | 0.247 | 10.4 | -- | -- | -0.201 | -- | -- | 0.225 | -- | 19.96 | 11 | -- | -- |
| 29.81 | 0.255 | 10.4 | -- | -- | -- | -- | -- | 0.255 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.81 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 2 | 20.86 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 3 | 20.95 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 7 | 21.19 | radiation | 10 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 11 | 21.33 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 13 | 21.37 | temperature | 20 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 15 | 21.37 | humidity | 80 | 14400 | > th | dose dependent | rect. | 2 | 6 |
| 16 | 21.37 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 7 |
| 23 | 21.43 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 33 | 21.47 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 3 |
| 41 | 21.51 | temperature | 20 | 10 | > th | dose independent | rect. | 5 | 23 |
| 48 | 21.57 | radiation | 10 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 64 | 21.63 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 95 | 21.71 | wind | 7 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 96 | 21.71 | temperature | 20 | 30 | > th | dose independent | rect. | 5 | 21 |
| 116 | 21.75 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 119 | 21.76 | temperature | 20 | 1440 | < th | dose dependent | sin | 8 | NA |
| 128 | 21.77 | temperature | 20 | 10 | < th | dose independent | rect. | 22 | 20 |
| 148 | 21.80 | temperature | 20 | 10 | < th | dose independent | rect. | 20 | 23 |
| 152 | 21.81 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 166 | 21.83 | humidity | 80 | 14400 | > th | dose dependent | sin | 8 | NA |
| 169 | 21.83 | humidity | 50 | 14400 | > th | dose dependent | rect. | 2 | 5 |
| 175 | 21.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 177 | 21.84 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 179 | 21.84 | wind | 5 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 186 | 21.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 210 | 21.89 | temperature | 20 | 30 | < th | dose independent | rect. | 9 | 20 |
| 212 | 21.89 | temperature | 20 | 10 | < th | dose independent | rect. | 6 | 23 |
| 238 | 21.92 | humidity | 70 | 14400 | > th | dose independent | rect. | 21 | 9 |
| 260 | 21.94 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 277 | 21.95 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 280 | 21.95 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 2 |
| 281 | 21.95 | humidity | 50 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 284 | 21.95 | radiation | 10 | 4320 | < th | dose dependent | rect. | 20 | 9 |
| 290 | 21.96 | humidity | 90 | 14400 | > th | dose independent | rect. | 24 | 10 |
| 297 | 21.96 | humidity | 50 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 322 | 21.98 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 326 | 21.98 | temperature | 20 | 10 | < th | dose independent | rect. | 17 | 23 |
| 328 | 21.98 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 339 | 21.99 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |
| 346 | 21.99 | temperature | 20 | 10 | < th | dose independent | rect. | 13 | 23 |
| 347 | 21.99 | temperature | 20 | 10 | < th | dose independent | rect. | 15 | 23 |
| 363 | 22.00 | temperature | 20 | 10 | < th | dose independent | rect. | 3 | 23 |
| 373 | 22.01 | temperature | 20 | 10 | < th | dose independent | rect. | 11 | 23 |
| 384 | 22.02 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 10 |
| 387 | 22.02 | temperature | 20 | 10 | > th | dose independent | rect. | 3 | 23 |
| 452 | 22.06 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 22 |
| 476 | 22.07 | temperature | 20 | 10 | < th | dose independent | rect. | 1 | 23 |
| 488 | 22.08 | humidity | 90 | 14400 | > th | dose independent | sin | 7 | NA |
| 490 | 22.08 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 596 | 22.13 | radiation | 1 | 1440 | > th | dose independent | rect. | 12 | 3 |
| 622 | 22.14 | humidity | 90 | 14400 | < th | dose independent | sin | 7 | NA |
| 693 | 22.17 | radiation | 1 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 729 | 22.18 | humidity | 90 | 14400 | > th | dose dependent | sin | 4 | NA |
| 805 | 22.22 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 807 | 22.22 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 15 |
| 816 | 22.22 | temperature | 20 | 10 | > th | dose independent | rect. | 16 | 23 |
| 847 | 22.23 | temperature | 20 | 270 | > th | dose independent | rect. | 16 | 23 |
| 863 | 22.24 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 16 |
| 919 | 22.26 | temperature | 20 | 10 | > th | dose independent | no | NA | NA |
| 973 | 22.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 16 |
| 983 | 22.28 | temperature | 20 | 1440 | < th | dose dependent | no | NA | NA |
| 985 | 22.28 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |