Os04g0455900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1692 domain containing protein.
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Os04g0455900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1692 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.73 | 0.214 | 9.5 | 0.546 | 0.491 | 0.828 | -0.185 | 0.132 | 0.291 | 4.14 | 29.8 | 9 | -- | -- |
| 20.75 | 0.212 | 9.49 | 0.567 | 0.493 | 0.824 | -0.168 | -- | 0.294 | 4.12 | 29.8 | 8 | -- | -- |
| 20.81 | 0.212 | 9.5 | 0.543 | 0.493 | 0.812 | -- | 0.0849 | 0.293 | 4.05 | 29.8 | 8 | -- | -- |
| 20.8 | 0.212 | 9.49 | 0.567 | 0.493 | 0.816 | -- | -- | 0.295 | 4.07 | 29.8 | 8 | -- | -- |
| 30.19 | 0.256 | 9.48 | 0.665 | -- | 1.27 | -- | 0.133 | 0.374 | -- | 30.43 | 41 | -- | -- |
| 29.79 | 0.256 | 9.53 | 0.374 | 0.749 | -- | 0.0817 | -- | 0.136 | 3.39 | -- | -- | -- | -- |
| 29.81 | 0.256 | 9.53 | 0.372 | 0.75 | -- | -- | -- | 0.135 | 3.4 | -- | -- | -- | -- |
| 30.21 | 0.256 | 9.48 | 0.687 | -- | 1.27 | -- | -- | 0.379 | -- | 30.51 | 42 | -- | -- |
| 28.41 | 0.25 | 9.52 | -- | 0.578 | 0.576 | -- | -- | 0.192 | 3.81 | 29.8 | 8 | -- | -- |
| 61.4 | 0.366 | 9.53 | 0.404 | -- | -- | -- | -- | 0.155 | -- | -- | -- | -- | -- |
| 33.46 | 0.271 | 9.54 | -- | 0.757 | -- | -- | -- | 0.094 | 3.4 | -- | -- | -- | -- |
| 41.78 | 0.301 | 9.51 | -- | -- | 1.26 | -- | -- | 0.253 | -- | 44.7 | 29 | -- | -- |
| 65.7 | 0.378 | 9.54 | -- | -- | -- | -- | -- | 0.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.00 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 5 | 19.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 16 | 20.18 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 20 | 20.40 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 23 | 20.50 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 25 | 20.59 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 26 | 20.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 28 | 20.76 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 30 | 20.80 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 33 | 20.83 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 35 | 20.83 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 37 | 20.87 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 42 | 20.91 | temperature | 30 | 30 | < th | dose dependent | sin | 3 | NA |
| 51 | 20.99 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 52 | 20.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 15 |
| 60 | 21.03 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 21 |
| 63 | 21.04 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 68 | 21.09 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 69 | 21.11 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 78 | 21.18 | temperature | 10 | 30 | > th | dose dependent | sin | 3 | NA |
| 85 | 21.20 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 89 | 21.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 121 | 21.33 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 127 | 21.36 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 165 | 21.47 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 167 | 21.48 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 216 | 21.69 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 217 | 21.69 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 219 | 21.69 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 248 | 21.77 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 19 |
| 278 | 21.83 | temperature | 20 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 283 | 21.84 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 300 | 21.88 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 310 | 21.90 | temperature | 25 | 30 | < th | dose independent | rect. | 4 | 14 |
| 322 | 21.93 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 366 | 22.02 | temperature | 20 | 30 | > th | dose dependent | rect. | 8 | 23 |
| 457 | 22.21 | temperature | 25 | 30 | < th | dose independent | rect. | 3 | 23 |
| 494 | 22.26 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 513 | 22.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 665 | 22.55 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 20 |
| 729 | 22.66 | temperature | 25 | 30 | < th | dose independent | sin | 1 | NA |
| 875 | 22.86 | temperature | 25 | 30 | > th | dose independent | sin | 1 | NA |
| 923 | 22.91 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 11 | 9 |
| 964 | 22.98 | temperature | 25 | 90 | > th | dose independent | rect. | 23 | 19 |
| 982 | 23.01 | temperature | 25 | 90 | > th | dose independent | rect. | 23 | 21 |