Os03g0321400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1692 domain containing protein.
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Os03g0321400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1692 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.16 | 0.206 | 12.6 | 0.531 | 0.212 | 0.341 | 0.447 | -0.057 | 0.407 | 22.2 | 20.1 | 1353 | -- | -- |
| 19.14 | 0.204 | 12.6 | 0.543 | 0.204 | 0.338 | 0.462 | -- | 0.401 | 22.1 | 20.5 | 1284 | -- | -- |
| 19.85 | 0.207 | 12.6 | 0.503 | 0.217 | 0.344 | -- | -0.0745 | 0.401 | 22.9 | 20.1 | 1596 | -- | -- |
| 19.82 | 0.207 | 12.6 | 0.495 | 0.212 | 0.379 | -- | -- | 0.407 | 22.2 | 19.1 | 2697 | -- | -- |
| 22.22 | 0.22 | 12.6 | 0.541 | -- | 0.335 | -- | 0.0317 | 0.406 | -- | 20.51 | 939 | -- | -- |
| 21.59 | 0.218 | 12.6 | 0.681 | 0.222 | -- | 0.445 | -- | 0.48 | 22.4 | -- | -- | -- | -- |
| 22.31 | 0.221 | 12.6 | 0.662 | 0.221 | -- | -- | -- | 0.478 | 23.1 | -- | -- | -- | -- |
| 22.22 | 0.22 | 12.6 | 0.535 | -- | 0.332 | -- | -- | 0.404 | -- | 20.53 | 939 | -- | -- |
| 22.14 | 0.219 | 12.7 | -- | 0.216 | 0.577 | -- | -- | 0.292 | 23 | 16.71 | 47520 | -- | -- |
| 25.34 | 0.235 | 12.6 | 0.667 | -- | -- | -- | -- | 0.48 | -- | -- | -- | -- | -- |
| 33.86 | 0.272 | 12.6 | -- | 0.227 | -- | -- | -- | 0.404 | 23.3 | -- | -- | -- | -- |
| 25.03 | 0.233 | 12.7 | -- | -- | 0.584 | -- | -- | 0.291 | -- | 16.88 | 47520 | -- | -- |
| 37.08 | 0.284 | 12.6 | -- | -- | -- | -- | -- | 0.406 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.70 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 8 |
| 2 | 18.76 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 8 | 18.87 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 7 |
| 10 | 18.89 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 14 | 18.90 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 5 |
| 16 | 18.90 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 9 |
| 17 | 18.90 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 9 |
| 19 | 18.90 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 18 |
| 46 | 18.93 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 57 | 18.93 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 69 | 18.95 | temperature | 20 | 1440 | > th | dose independent | sin | 13 | NA |
| 71 | 18.95 | temperature | 20 | 1440 | < th | dose independent | sin | 13 | NA |
| 101 | 18.96 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 16 |
| 125 | 18.98 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 130 | 18.98 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 133 | 18.98 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 10 |
| 155 | 18.99 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 158 | 18.99 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 5 |
| 175 | 18.99 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 14 |
| 207 | 19.01 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 217 | 19.02 | radiation | 10 | 1440 | < th | dose independent | sin | 17 | NA |
| 245 | 19.04 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 246 | 19.04 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 286 | 19.06 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 369 | 19.11 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 384 | 19.12 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 396 | 19.12 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 412 | 19.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 21 |
| 414 | 19.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 433 | 19.14 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 19 |
| 436 | 19.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 21 |
| 443 | 19.14 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 462 | 19.15 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 19 |
| 497 | 19.16 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 499 | 19.17 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 548 | 19.19 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 584 | 19.19 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 585 | 19.19 | temperature | 20 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 593 | 19.20 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 621 | 19.20 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 669 | 19.22 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 686 | 19.22 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 741 | 19.24 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 745 | 19.24 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 783 | 19.26 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 785 | 19.27 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 801 | 19.27 | wind | 5 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 841 | 19.30 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 891 | 19.32 | temperature | 20 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 892 | 19.32 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 6 |
| 908 | 19.33 | wind | 5 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 949 | 19.35 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 998 | 19.37 | temperature | 20 | 1440 | < th | dose dependent | rect. | 12 | 17 |
| 1000 | 19.38 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 1 |