Os03g0784400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1692 domain containing protein.
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Os03g0784400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1692 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.8 | 0.204 | 12.1 | -0.191 | 0.387 | 0.029 | -0.0197 | -2.95 | 0.13 | 0.0718 | 28.9 | 1536 | -- | -- |
| 19.2 | 0.204 | 12 | 0.361 | 0.382 | -0.275 | 0.00582 | -- | 0.211 | 23.8 | 27.83 | 5792 | -- | -- |
| 18.79 | 0.202 | 12.1 | -0.149 | 0.387 | -0.015 | -- | -2.57 | 0.128 | 0.0434 | 28.5 | 1533 | -- | -- |
| 19.17 | 0.204 | 12 | 0.36 | 0.378 | -0.283 | -- | -- | 0.209 | 0.051 | 27.83 | 5763 | -- | -- |
| 27.78 | 0.247 | 12 | 0.328 | -- | -0.527 | -- | 0.145 | 0.206 | -- | 28.34 | 1669 | -- | -- |
| 22.92 | 0.224 | 12 | 0.264 | 0.367 | -- | -0.0575 | -- | 0.209 | 23.9 | -- | -- | -- | -- |
| 22.93 | 0.224 | 12 | 0.266 | 0.367 | -- | -- | -- | 0.209 | 23.9 | -- | -- | -- | -- |
| 26.47 | 0.241 | 12 | 0.335 | -- | -0.501 | -- | -- | 0.219 | -- | 26.69 | 5957 | -- | -- |
| 22.3 | 0.22 | 12.1 | -- | 0.381 | -0.209 | -- | -- | 0.154 | 0.147 | 29.22 | 5767 | -- | -- |
| 31.4 | 0.262 | 12 | 0.277 | -- | -- | -- | -- | 0.214 | -- | -- | -- | -- | -- |
| 24.8 | 0.233 | 12 | -- | 0.37 | -- | -- | -- | 0.18 | 23.9 | -- | -- | -- | -- |
| 29.39 | 0.253 | 12 | -- | -- | -0.449 | -- | -- | 0.182 | -- | 26.69 | 5957 | -- | -- |
| 33.43 | 0.27 | 12 | -- | -- | -- | -- | -- | 0.184 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 2 | 18.47 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 7 | 18.58 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 8 | 18.58 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 11 | 18.62 | temperature | 10 | 720 | > th | dose dependent | sin | 17 | NA |
| 13 | 18.63 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 17 | 18.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 15 |
| 27 | 18.69 | temperature | 25 | 720 | > th | dose dependent | sin | 10 | NA |
| 40 | 18.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 12 |
| 48 | 18.76 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 13 |
| 85 | 18.81 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 93 | 18.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 160 | 18.85 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 180 | 18.86 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 182 | 18.86 | temperature | 30 | 1440 | > th | dose dependent | sin | 1 | NA |
| 202 | 18.87 | temperature | 10 | 1440 | > th | dose dependent | sin | 21 | NA |
| 231 | 18.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 19 |
| 237 | 18.88 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 238 | 18.88 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 9 |
| 242 | 18.88 | temperature | 30 | 1440 | > th | dose dependent | sin | 22 | NA |
| 268 | 18.88 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 17 |
| 292 | 18.89 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 9 |
| 338 | 18.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 12 |
| 373 | 18.90 | temperature | 30 | 1440 | < th | dose independent | sin | 0 | NA |
| 380 | 18.90 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 387 | 18.90 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 390 | 18.90 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 19 |
| 391 | 18.90 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 392 | 18.90 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 395 | 18.90 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 405 | 18.90 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 552 | 18.90 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 563 | 18.91 | temperature | 30 | 1440 | > th | dose independent | sin | 0 | NA |
| 566 | 18.91 | temperature | 30 | 1440 | < th | dose independent | sin | 22 | NA |
| 597 | 18.91 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 19 |
| 606 | 18.91 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 609 | 18.91 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 689 | 18.92 | temperature | 30 | 1440 | > th | dose independent | sin | 21 | NA |
| 697 | 18.92 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 698 | 18.92 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 702 | 18.92 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 849 | 18.92 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 872 | 18.92 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 15 |
| 915 | 18.93 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |