BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0438300 Os05g0438300|Os05g0438300
(449 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0438300 791 0.0
Os11g0636200 Conserved hypothetical protein 669 0.0
Os02g0447300 255 5e-68
Os07g0153100 Hypothetical protein 249 2e-66
Os11g0541500 218 8e-57
Os09g0300000 214 7e-56
Os09g0314100 Disease resistance protein family protein 155 7e-38
Os11g0504000 Conserved hypothetical protein 68 1e-11
Os11g0485000 Conserved hypothetical protein 67 3e-11
>Os05g0438300
Length = 449
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/393 (96%), Positives = 380/393 (96%)
Query: 1 MNSIHRKRLARQQQGRNISTRSNASATNAKNRVPEMIXXXXXXXXXXXXXQRLCAGNSSN 60
MNSIHRKRLARQQQGRNISTRSNASATNAKNRVPEMI QRLCAGNSSN
Sbjct: 1 MNSIHRKRLARQQQGRNISTRSNASATNAKNRVPEMINGGGSSNSGANSSQRLCAGNSSN 60
Query: 61 TDNASQATNISGSGMSSVPPNKRGRKKGSRTALKVPPRGRKIALKPRGDEQFEYVTYPLL 120
TDNASQATNISGSGMSSVPPNKRGRKKGSRTALKVPPRGRKIALKPRGDEQFEYVTYPLL
Sbjct: 61 TDNASQATNISGSGMSSVPPNKRGRKKGSRTALKVPPRGRKIALKPRGDEQFEYVTYPLL 120
Query: 121 KSDPKYGTHMGIILKREYPGIIEEKDENGLIISSRLATSWFDYYEKKDDSGVTNADKVKQ 180
KSDPKYGTHMGIILKREYPGIIEEKDENGLIISSRLATSWFDYYEKKDDSGVTNADKVKQ
Sbjct: 121 KSDPKYGTHMGIILKREYPGIIEEKDENGLIISSRLATSWFDYYEKKDDSGVTNADKVKQ 180
Query: 181 EFWNAFCVSEADKVEADRVLENYAAKSVRQMMYQLRVDSVKVYHDKIGEQIDDALARPKE 240
EFWNAFCVSEADKVEADRVLENYAAKSVRQMMYQLRVDSVKVYHDKIGEQIDDALARPKE
Sbjct: 181 EFWNAFCVSEADKVEADRVLENYAAKSVRQMMYQLRVDSVKVYHDKIGEQIDDALARPKE 240
Query: 241 LEVDEYKDGPVDWCRDNGFSYLADYWCTEEFKAKRKRGQQARLNSEDVAQNRGGSRPFTE 300
LEVDEYKDGPVDWCRDNGFSYLADYWCTEEFKAKRKRGQQARLNSEDVAQNRGGSRPFTE
Sbjct: 241 LEVDEYKDGPVDWCRDNGFSYLADYWCTEEFKAKRKRGQQARLNSEDVAQNRGGSRPFTE 300
Query: 301 TQQYMGVKFGPEKATTLNTFSAMKTGFKNIDNDGNIGPIPSQKAQKRVALYEKLGEQVPQ 360
TQQYMGVKFGPEKATTLNTFSAMKTGFKNIDNDGNIGPIPSQKAQKRVALYEKLGEQVPQ
Sbjct: 301 TQQYMGVKFGPEKATTLNTFSAMKTGFKNIDNDGNIGPIPSQKAQKRVALYEKLGEQVPQ 360
Query: 361 ELDCPVEEEDPFAQKIGLEGNKFFPCSLTQPVE 393
ELDCPVEEEDPFAQKIGLEGNKFFPCSLTQPVE
Sbjct: 361 ELDCPVEEEDPFAQKIGLEGNKFFPCSLTQPVE 393
>Os11g0636200 Conserved hypothetical protein
Length = 538
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/351 (92%), Positives = 328/351 (93%)
Query: 1 MNSIHRKRLARQQQGRNISTRSNASATNAKNRVPEMIXXXXXXXXXXXXXQRLCAGNSSN 60
MN I RKRLARQQQ RNISTRSNASATNAKNRVPEMI QRLCAGNSSN
Sbjct: 1 MNGIDRKRLARQQQCRNISTRSNASATNAKNRVPEMINGGGSSNSGANSSQRLCAGNSSN 60
Query: 61 TDNASQATNISGSGMSSVPPNKRGRKKGSRTALKVPPRGRKIALKPRGDEQFEYVTYPLL 120
TDNASQATNI+GSGMSS PPNKRGRKKGSRTALKVPPRGRKIALKPRGDEQFEYVTYPLL
Sbjct: 61 TDNASQATNIAGSGMSSAPPNKRGRKKGSRTALKVPPRGRKIALKPRGDEQFEYVTYPLL 120
Query: 121 KSDPKYGTHMGIILKREYPGIIEEKDENGLIISSRLATSWFDYYEKKDDSGVTNADKVKQ 180
KSDPKYGTHMGIILKREYPGIIEEKDENG+IISSR ATSWFDYYEK+DDSGVT ADKVKQ
Sbjct: 121 KSDPKYGTHMGIILKREYPGIIEEKDENGVIISSRPATSWFDYYEKEDDSGVTKADKVKQ 180
Query: 181 EFWNAFCVSEADKVEADRVLENYAAKSVRQMMYQLRVDSVKVYHDKIGEQIDDALARPKE 240
EFWNAFCVSEADKVEADRVLENYAAKSVRQMMYQL VDSVKVYHDKIGE+IDDALARPKE
Sbjct: 181 EFWNAFCVSEADKVEADRVLENYAAKSVRQMMYQLCVDSVKVYHDKIGEEIDDALARPKE 240
Query: 241 LEVDEYKDGPVDWCRDNGFSYLADYWCTEEFKAKRKRGQQARLNSEDVAQNRGGSRPFTE 300
LEVDEYKDGPVDWCRDNGFSY+ADYWCTEEFKAKRKRGQQARLNSEDVAQNRGGSRPFTE
Sbjct: 241 LEVDEYKDGPVDWCRDNGFSYIADYWCTEEFKAKRKRGQQARLNSEDVAQNRGGSRPFTE 300
Query: 301 TQQYMGVKFGPEKATTLNTFSAMKTGFKNIDNDGNIGPIPSQKAQKRVALY 351
TQQYMGVKFGPEKATTLNTFSAMKTGFKNIDNDGNIGPIPSQKAQK V Y
Sbjct: 301 TQQYMGVKFGPEKATTLNTFSAMKTGFKNIDNDGNIGPIPSQKAQKHVTDY 351
>Os02g0447300
Length = 562
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 146/318 (45%), Positives = 202/318 (63%), Gaps = 10/318 (3%)
Query: 58 SSNTDNASQATNISGSGMSSVPPNKRGRKKGSRTALKVPPRGRKIALKPRGDEQFEYVTY 117
+SN + SQ ++ + + + +RGRK+ SRT+L VP GRK+ L PRG+ QF+YV
Sbjct: 94 NSNAEGQSQGSHRAITEQAEQQARQRGRKERSRTSLAVPRPGRKVGLIPRGEMQFKYVN- 152
Query: 118 PLLKSDPKYGTHMGIILKREYPGIIEEKDENGLIISSRLATSWFDYYEKKDDS-GVTNAD 176
++ KY + +G+ILKREYPG +++ D +G II SR A W DYY K+++ G T A+
Sbjct: 153 -CHAAEYKYTSQLGVILKREYPGTVKDLDNDGRIIRSRPALHWADYYLKENEEYGETCAE 211
Query: 177 KVKQEFWNAFCVSEADKVEADRVLENYAAKSVRQMMYQLRVDSVKVYHDKI-GEQIDDAL 235
+V+ F E K EA+RVL+ YA K V MMYQLRVD+VK+Y K+ GE+I D +
Sbjct: 212 RVR-----LFSTREELKAEANRVLQQYANKRVNDMMYQLRVDAVKLYFFKVRGEKIKDEV 266
Query: 236 ARPKELEVDEYKDGPVDWCRDNGFSYLADYWCTEEFKAKRKRGQQARLNSEDVAQNRGGS 295
AR EL +EY V+W ++ + L +W TE++ KRK+ Q +RL SED ++NRGGS
Sbjct: 267 ARTIELSDEEYLLARVEWVSESDWPSLCHHWDTEQYLEKRKKAQDSRLQSEDDSRNRGGS 326
Query: 296 RPFTETQQYMGVKFGPEKATTLNTFSAMKTGFKNIDNDGNIGPIPSQKAQKRVALYEKLG 355
RPFTETQQ++ FGPEKAT LNTF MK+G KN+D+ G G I +QKA+K +A Y +
Sbjct: 327 RPFTETQQWLAHDFGPEKATGLNTFGVMKSGAKNVDSTGTHGRIDNQKAEKIMADYTAVT 386
Query: 356 EQVPQELDCPVEEEDPFA 373
Q D E DP A
Sbjct: 387 SSGTQG-DSDGHELDPKA 403
>Os07g0153100 Hypothetical protein
Length = 143
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/140 (89%), Positives = 127/140 (90%), Gaps = 6/140 (4%)
Query: 69 NISGSGMSSVPPNKRGRKKGSRTALKVPPRGRKIALKPRGDEQFEYVTYPLLKSDPKYGT 128
NIS SGMSS PPNKRGRKKGSRTALKVPPRGRKIALKPRGDEQFEY+TYPLLKSDPKYGT
Sbjct: 1 NISRSGMSSAPPNKRGRKKGSRTALKVPPRGRKIALKPRGDEQFEYITYPLLKSDPKYGT 60
Query: 129 HMGIILKREYPGIIEEKDENGLIISSRLATSWFDYYEKKDDSGVTNADKVKQEFWNAFCV 188
HMGIILKREYP IIEEKDENGLIISSR ATSWFDYYEK+DDSGVT ADK NAFCV
Sbjct: 61 HMGIILKREYPCIIEEKDENGLIISSRPATSWFDYYEKEDDSGVTKADK------NAFCV 114
Query: 189 SEADKVEADRVLENYAAKSV 208
SEADKVEA RVLENYAAKS
Sbjct: 115 SEADKVEAGRVLENYAAKSA 134
>Os11g0541500
Length = 608
Score = 218 bits (555), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 174/295 (58%), Gaps = 44/295 (14%)
Query: 58 SSNTDNASQATNISGSGMSSVPPNKRGRKKGSRTALKVPPRGRKIALKPRGDEQFEYVTY 117
+SN + SQ ++ + + + +RGRK+ SRT+L VP GRK+ L PRG+ QF+YV +
Sbjct: 217 NSNAEGQSQGSHRASTEQAEQQATQRGRKERSRTSLAVPRPGRKVGLIPRGEMQFKYVNW 276
Query: 118 PLLKSDPKYGTHMGIILKREYPGIIEEKDENGLIISSRLATSWFDYYEKKDDSGVTNADK 177
++ KY + +G+ILKREYPG +++ D +
Sbjct: 277 H--AAEYKYTSQLGVILKREYPGTVKDLDND----------------------------- 305
Query: 178 VKQEFWNAFCVSEADKVEADRVLENYAAKSVRQMMYQLRVDSVKVYHDKI-GEQIDDALA 236
E K EA+RVL+ YA K V MMYQLRVD+VK+Y K+ GE+I D +A
Sbjct: 306 ------------EELKAEANRVLQQYANKRVNDMMYQLRVDAVKLYFFKVRGEKIKDEVA 353
Query: 237 RPKELEVDEYKDGPVDWCRDNGFSYLADYWCTEEFKAKRKRGQQARLNSEDVAQNRGGSR 296
R EL +EY V+W ++ + L +W TE++ KRK+ Q +RL SED ++NRGGSR
Sbjct: 354 RTIELSEEEYLLARVEWVSESDWPSLCHHWDTEQYLEKRKKAQDSRLQSEDDSRNRGGSR 413
Query: 297 PFTETQQYMGVKFGPEKATTLNTFSAMKTGFKNIDNDGNIGPIPSQKAQKRVALY 351
PFTETQQ++ FGPEKAT LNTF MK+G KN+D+ G G I +QKA+K +A Y
Sbjct: 414 PFTETQQWLAHDFGPEKATGLNTFGVMKSGAKNVDSTGTHGRIDNQKAEKIMADY 468
>Os09g0300000
Length = 458
Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 161/243 (66%), Gaps = 9/243 (3%)
Query: 111 QFEYVTYPLLKSDPKYGTHMGIILKREYPGIIEEKDENGLIISSRLATSWFDYYEKKDDS 170
QF+YV + ++ KY + +G+ILKREY G +++ D +G II SR A W DY K+++
Sbjct: 43 QFKYVNWH--AAEYKYTSQLGVILKREYSGTVKDLDNDGRIIRSRPALHWADYCLKENEE 100
Query: 171 -GVTNADKVKQEFWNAFCVSEADKVEADRVLENYAAKSVRQMMYQLRVDSVKVYHDKI-G 228
G T A++V+ F E K EA+RVL+ YA K V MMYQLRVD+VK+Y K+ G
Sbjct: 101 YGETCAERVR-----LFSTREELKAEANRVLQQYANKRVNDMMYQLRVDAVKLYFFKVRG 155
Query: 229 EQIDDALARPKELEVDEYKDGPVDWCRDNGFSYLADYWCTEEFKAKRKRGQQARLNSEDV 288
E+I D +AR EL +EY V+W ++ + L +W TE++ KRK+ Q +RL SED
Sbjct: 156 EKIKDEVARTIELSDEEYLLARVEWVSESDWPSLCHHWDTEQYLEKRKKAQDSRLQSEDD 215
Query: 289 AQNRGGSRPFTETQQYMGVKFGPEKATTLNTFSAMKTGFKNIDNDGNIGPIPSQKAQKRV 348
++NRGGSRPFTETQQ++ FGPEKAT LNTF MK+G KN+D+ G G I +QKA+K +
Sbjct: 216 SRNRGGSRPFTETQQWLAHDFGPEKATGLNTFGVMKSGAKNVDSTGTHGRIDNQKAEKIM 275
Query: 349 ALY 351
A Y
Sbjct: 276 ADY 278
>Os09g0314100 Disease resistance protein family protein
Length = 1511
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 138/245 (56%), Gaps = 13/245 (5%)
Query: 127 GTHMGIILKREYPGIIEEKDENGLIISSRLATSWFDYYEKKDDSGVTNADKVKQEFWNAF 186
G+ +G L+REYPG+++E G RLA SW Y+ +KD +G+T ++VK EFW+ F
Sbjct: 6 GSVLGTSLRREYPGLVKEYAGPGQRKRKRLAMSWGHYFGEKDHNGMTAGNRVKDEFWSFF 65
Query: 187 CVSEADKVEADRVLENYAAKSVRQMMYQLRVDSVKVYHDKIGEQIDDALARPKELEVDEY 246
E D E D+ ++NY V +++ Q RVD++K Y+ G+ I A EL ++Y
Sbjct: 66 TTQEEDMEELDKNIDNYCQARVPKIICQARVDAMKKYY---GKGIKGKNASAIELNFEQY 122
Query: 247 KDGPVDWCRDNGFSYLADYWCTEEFKAKRKRGQQARLNSEDVAQNRGGSRPFTETQQYMG 306
+DW + + +W ++++K KRKRGQ AR +ED AQ +GGS PF QQ +
Sbjct: 123 MTCKLDWINVDAWKCFCHWWTSDKYKEKRKRGQDARFANEDYAQQQGGSLPFCTIQQNLV 182
Query: 307 VKFGPEKATTLNTFSAMKTGFKNIDNDGNIGPIPSQKAQKRVALY-----EKLGEQ---V 358
+ GPE A+ L+T+ GFK + G I S+K ++R+ +Y E+ GE+ V
Sbjct: 183 YQLGPENASGLDTYRVQMAGFKA--SLKGSGQIRSEKVKQRINIYCQVYHEERGEEHQPV 240
Query: 359 PQELD 363
ELD
Sbjct: 241 SSELD 245
>Os11g0504000 Conserved hypothetical protein
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 37/211 (17%)
Query: 114 YVTYPLLKSDPKYGTHMGIILKREYPGIIEEKDENGLIISSRLATSWFDYYEKKDDSGVT 173
+ YP + S + T G +L+ YPG I GL A +W DY ++ ++
Sbjct: 16 FEVYPHISSR-RPSTVQGALLRMFYPGAI------GLPEFRTPALTWRDYKRSTNERIMS 68
Query: 174 NADKVKQEFWNAFCVSEADKVEADRVLENYAAKSVRQMMYQLRVDSVKVYHDK---IGEQ 230
AD+V +EFW F DKVEAD+VLE K V QM+++ + + + K E
Sbjct: 69 PADRVLKEFWYCFKCDPTDKVEADKVLEQNFKKKVPQMLFEEKKRATNKLYKKGKVPAED 128
Query: 231 IDD---------AL--ARPKELEVDEYKDGPVDWCRDNGFSYLADYWCTEEFKAKRKRGQ 279
+D+ AL A+PK+ V E G+ L ++W T +F+ K G+
Sbjct: 129 VDEDDNHWPTVQALVSAKPKDFSVTE-----------EGWRLLCEHWSTPKFRKKSLNGK 177
Query: 280 QARLNSEDVAQNRGGSRPFTETQQYMGVKFG 310
+ RL D G + +Q++ K G
Sbjct: 178 RNRLAGGDT-----GYQCLVAMKQFLQHKKG 203
>Os11g0485000 Conserved hypothetical protein
Length = 246
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 38/195 (19%)
Query: 104 LKPRGDEQFEYVTYPLLKSDPKYGTHMGIILKREYPGIIEEKDENGLIISSRLATSWFDY 163
+ P GD + YP + S + T G +L R YPG I GL A +W DY
Sbjct: 9 IVPAGDA---FEVYPHISSR-RPSTVQGALLHRFYPGAI------GLPECRTPALTWRDY 58
Query: 164 YEKKDDSGVTNADKVKQEFWNAFCVSEADKVEADRVLENYAAKSVRQMMYQLRVDSVKVY 223
++ ++ AD+V + FW F DKVEAD+VLE K+V QM+++ + +
Sbjct: 59 KRSTNERMMSPADRVLKGFWYCFKCDPTDKVEADKVLEQNFKKNVPQMLFEEKKRATNKL 118
Query: 224 HDKI---GEQIDD---------AL--ARPKELEVDEYKDGPVDWCRDNGFSYLADYWCTE 269
+ K E +D+ AL A+P + V E G+ L ++W T
Sbjct: 119 YKKCKVPAEDVDEDGNHWPTVQALVSAKPNDFSVTE-----------EGWHLLCEHWSTP 167
Query: 270 EFKAK---RKRGQQA 281
EF+ K RKR + A
Sbjct: 168 EFRKKSLYRKRNRFA 182
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.313 0.131 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,220,461
Number of extensions: 554771
Number of successful extensions: 1205
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1194
Number of HSP's successfully gapped: 9
Length of query: 449
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 345
Effective length of database: 11,605,545
Effective search space: 4003913025
Effective search space used: 4003913025
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 158 (65.5 bits)