Os11g0485000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0485000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 226.89 | 0.708 | 2.91 | 0.157 | 0.133 | 0.999 | -0.0327 | 2.66 | 0.00856 | 8.53 | 1014 | 5027 | -- | -- |
| 242.25 | 0.725 | 2.86 | 0.527 | 0.15 | 0.806 | -0.137 | -- | 0.0892 | 7.84 | 1013 | 4291 | -- | -- |
| 226.79 | 0.701 | 2.9 | 0.146 | 0.131 | 0.88 | -- | 2.38 | 0.0116 | 8 | 1014 | 5050 | -- | -- |
| 242.29 | 0.725 | 2.86 | 0.523 | 0.148 | 0.809 | -- | -- | 0.0895 | 8 | 1013 | 4275 | -- | -- |
| 227.74 | 0.703 | 2.91 | 0.125 | -- | 0.835 | -- | 2.33 | 0.00545 | -- | 1014 | 5074 | -- | -- |
| 256.08 | 0.75 | 2.89 | 0.418 | 0.127 | -- | -0.1 | -- | -0.0163 | 8.52 | -- | -- | -- | -- |
| 256.11 | 0.749 | 2.89 | 0.415 | 0.127 | -- | -- | -- | -0.0162 | 8.64 | -- | -- | -- | -- |
| 243.48 | 0.727 | 2.87 | 0.522 | -- | 0.798 | -- | -- | 0.0887 | -- | 1013 | 4277 | -- | -- |
| 248.49 | 0.734 | 2.88 | -- | 0.152 | 0.851 | -- | -- | 0.017 | 7.5 | 1014 | 3922 | -- | -- |
| 257.02 | 0.749 | 2.89 | 0.415 | -- | -- | -- | -- | -0.0151 | -- | -- | -- | -- | -- |
| 260.65 | 0.755 | 2.9 | -- | 0.128 | -- | -- | -- | -0.0624 | 8.4 | -- | -- | -- | -- |
| 249.63 | 0.736 | 2.88 | -- | -- | 0.837 | -- | -- | 0.0137 | -- | 1013 | 3895 | -- | -- |
| 261.57 | 0.755 | 2.9 | -- | -- | -- | -- | -- | -0.0612 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 216.10 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 2 | 216.10 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 3 | 222.28 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 23 | 1 |
| 4 | 222.28 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 23 | 1 |
| 5 | 224.01 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 10 | 224.16 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 11 | 224.18 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 25 | 224.92 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 8 | 15 |
| 29 | 225.02 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 8 | 15 |
| 33 | 225.09 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 34 | 225.10 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 12 | 10 |
| 50 | 225.20 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 12 | 10 |
| 51 | 225.22 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 62 | 225.27 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 8 | 16 |
| 105 | 225.50 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 19 | NA |
| 142 | 225.70 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 11 | 11 |
| 160 | 225.78 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 19 | NA |
| 211 | 226.05 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 226 | 226.14 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 230 | 226.15 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 246 | 226.16 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 12 | 4 |
| 319 | 226.38 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 19 | NA |
| 433 | 226.77 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 466 | 226.97 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 496 | 227.08 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 20 | 19 |
| 536 | 227.21 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 555 | 227.28 | atmosphere | 1015.0 | 4320 | < th | dose independent | no | NA | NA |
| 582 | 227.37 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 20 | 18 |
| 609 | 227.44 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 12 | 23 |
| 695 | 227.67 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 1 | 23 |
| 699 | 227.68 | atmosphere | 1015.0 | 4320 | > th | dose independent | no | NA | NA |
| 761 | 227.88 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 11 | 23 |
| 862 | 228.19 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 875 | 228.22 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 5 | 4 |
| 876 | 228.22 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 2 | 7 |
| 880 | 228.23 | wind | 5.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 882 | 228.23 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 22 | 11 |
| 924 | 228.31 | wind | 5.0 | 270 | > th | dose dependent | rect. | 23 | 1 |
| 954 | 228.41 | wind | 5.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 956 | 228.41 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 21 | 16 |