BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0418000 Os05g0418000|AK066648
         (445 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os05g0418000  GDP dissociation inhibitor protein OsGDI1           892   0.0  
Os05g0304400  Similar to GDP dissociation inhibitor protein ...   879   0.0  
Os07g0271000  Similar to GDP dissociation inhibitor protein ...   766   0.0  
Os03g0277000  Similar to GDP dissociation inhibitor protein ...   742   0.0  

>Os05g0418000 GDP dissociation inhibitor protein OsGDI1
          Length = 445

 Score =  892 bits (2306), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/429 (100%), Positives = 429/429 (100%)

Query: 1   MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKRFRGEDK 60
           MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKRFRGEDK
Sbjct: 1   MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKRFRGEDK 60

Query: 61  PPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPA 120
           PPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPA
Sbjct: 61  PPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPA 120

Query: 121 TDMEALKSPLMGLFEKRRARNFFIYVQDYDEADPKTHQGLDLTTMTTRELIAKYGLSDDT 180
           TDMEALKSPLMGLFEKRRARNFFIYVQDYDEADPKTHQGLDLTTMTTRELIAKYGLSDDT
Sbjct: 121 TDMEALKSPLMGLFEKRRARNFFIYVQDYDEADPKTHQGLDLTTMTTRELIAKYGLSDDT 180

Query: 181 VDFIGHALALHRDDRYLNEPAIDTVKRMKLYAESLARFQGGSPYIYPLYGLGELPQGFAR 240
           VDFIGHALALHRDDRYLNEPAIDTVKRMKLYAESLARFQGGSPYIYPLYGLGELPQGFAR
Sbjct: 181 VDFIGHALALHRDDRYLNEPAIDTVKRMKLYAESLARFQGGSPYIYPLYGLGELPQGFAR 240

Query: 241 LSAVYGGTYMLNKPDCKVEFDMEGKVCGVTSEGETAKCKKVVCDPSYLPNKVRKIGKVAR 300
           LSAVYGGTYMLNKPDCKVEFDMEGKVCGVTSEGETAKCKKVVCDPSYLPNKVRKIGKVAR
Sbjct: 241 LSAVYGGTYMLNKPDCKVEFDMEGKVCGVTSEGETAKCKKVVCDPSYLPNKVRKIGKVAR 300

Query: 301 AIAIMSHPIANTNDSHSVQIILPQKQLGRKSDMYVFGCSYTHNVAPKGKFIAFVSTEAET 360
           AIAIMSHPIANTNDSHSVQIILPQKQLGRKSDMYVFGCSYTHNVAPKGKFIAFVSTEAET
Sbjct: 301 AIAIMSHPIANTNDSHSVQIILPQKQLGRKSDMYVFGCSYTHNVAPKGKFIAFVSTEAET 360

Query: 361 DHPESELKPGIDLLGQVDELFFDIYDRYEPVNEPSLDNCFVSTSYDATTHFETTVTDVLN 420
           DHPESELKPGIDLLGQVDELFFDIYDRYEPVNEPSLDNCFVSTSYDATTHFETTVTDVLN
Sbjct: 361 DHPESELKPGIDLLGQVDELFFDIYDRYEPVNEPSLDNCFVSTSYDATTHFETTVTDVLN 420

Query: 421 MYTLITGKT 429
           MYTLITGKT
Sbjct: 421 MYTLITGKT 429



>Os05g0304400 Similar to GDP dissociation inhibitor protein OsGDI2
          Length = 445

 Score =  879 bits (2270), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/428 (98%), Positives = 427/428 (99%)

Query: 1   MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKRFRGEDK 60
           MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKRFRGEDK
Sbjct: 1   MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKRFRGEDK 60

Query: 61  PPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPA 120
           PPAHLG+S+DYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPA
Sbjct: 61  PPAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPA 120

Query: 121 TDMEALKSPLMGLFEKRRARNFFIYVQDYDEADPKTHQGLDLTTMTTRELIAKYGLSDDT 180
           TDMEALKSPLMGLFEKRRARNFFIYVQDY+EADPKTHQGLDLTTMTTRELIAKYGLSDDT
Sbjct: 121 TDMEALKSPLMGLFEKRRARNFFIYVQDYNEADPKTHQGLDLTTMTTRELIAKYGLSDDT 180

Query: 181 VDFIGHALALHRDDRYLNEPAIDTVKRMKLYAESLARFQGGSPYIYPLYGLGELPQGFAR 240
           VDFIGHALALHRDDRYLNEPAIDTVKRMKLYAESLARFQGGSPYIYPLYGLGELPQGFAR
Sbjct: 181 VDFIGHALALHRDDRYLNEPAIDTVKRMKLYAESLARFQGGSPYIYPLYGLGELPQGFAR 240

Query: 241 LSAVYGGTYMLNKPDCKVEFDMEGKVCGVTSEGETAKCKKVVCDPSYLPNKVRKIGKVAR 300
           LSAVYGGTYMLNKPDCKVEFDMEGKVCGVTSEGETAKCKKVVCDPSYLPNKVRKIGKVAR
Sbjct: 241 LSAVYGGTYMLNKPDCKVEFDMEGKVCGVTSEGETAKCKKVVCDPSYLPNKVRKIGKVAR 300

Query: 301 AIAIMSHPIANTNDSHSVQIILPQKQLGRKSDMYVFGCSYTHNVAPKGKFIAFVSTEAET 360
           AIAIMSHPIA+TNDSHSVQIILPQKQLGRKSDMYVF CSYTHNVAPKGKFIAFVSTEAET
Sbjct: 301 AIAIMSHPIASTNDSHSVQIILPQKQLGRKSDMYVFCCSYTHNVAPKGKFIAFVSTEAET 360

Query: 361 DHPESELKPGIDLLGQVDELFFDIYDRYEPVNEPSLDNCFVSTSYDATTHFETTVTDVLN 420
           D+P+SELKPGIDLLGQVDELFFDIYDRYEPVNEPSLDNCFVSTSYDATTHFETTVTDVLN
Sbjct: 361 DNPQSELKPGIDLLGQVDELFFDIYDRYEPVNEPSLDNCFVSTSYDATTHFETTVTDVLN 420

Query: 421 MYTLITGK 428
           MYTLITGK
Sbjct: 421 MYTLITGK 428



>Os07g0271000 Similar to GDP dissociation inhibitor protein OsGDI1
          Length = 446

 Score =  766 bits (1979), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/429 (83%), Positives = 395/429 (92%)

Query: 1   MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKRFRGEDK 60
           MD EYDVIVLGTGLKECILSGLLSVD LKVLHMDRNDYYGGDSTSLNLNQLWKRF+GE  
Sbjct: 1   MDVEYDVIVLGTGLKECILSGLLSVDRLKVLHMDRNDYYGGDSTSLNLNQLWKRFKGEGT 60

Query: 61  PPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPA 120
           PPA +GASRDYNVDM+PKFMMANGTLVR LIHT VTKYLSFKAVDGSYVF+KGKIHKVP+
Sbjct: 61  PPAQIGASRDYNVDMIPKFMMANGTLVRVLIHTGVTKYLSFKAVDGSYVFNKGKIHKVPS 120

Query: 121 TDMEALKSPLMGLFEKRRARNFFIYVQDYDEADPKTHQGLDLTTMTTRELIAKYGLSDDT 180
           TDMEALKSPLMGLFEKRRA  FF++VQDY E DP TH+G DL  MTT+ELI+KYGL D+T
Sbjct: 121 TDMEALKSPLMGLFEKRRAGKFFLFVQDYKENDPSTHKGYDLNKMTTKELISKYGLDDNT 180

Query: 181 VDFIGHALALHRDDRYLNEPAIDTVKRMKLYAESLARFQGGSPYIYPLYGLGELPQGFAR 240
           +DFIGHA+ALH++D YL EPAIDTVKRMKLYAES+ RFQGGSPYIYPLYGLGELPQGFAR
Sbjct: 181 IDFIGHAVALHKEDNYLTEPAIDTVKRMKLYAESVGRFQGGSPYIYPLYGLGELPQGFAR 240

Query: 241 LSAVYGGTYMLNKPDCKVEFDMEGKVCGVTSEGETAKCKKVVCDPSYLPNKVRKIGKVAR 300
           LSAVYGGTYMLNKP+CK+EF+ EGKVCGVTSEGETAKCKKVVCDPSY+P+KVRK+GKV R
Sbjct: 241 LSAVYGGTYMLNKPECKIEFNDEGKVCGVTSEGETAKCKKVVCDPSYIPDKVRKVGKVFR 300

Query: 301 AIAIMSHPIANTNDSHSVQIILPQKQLGRKSDMYVFGCSYTHNVAPKGKFIAFVSTEAET 360
           AIAIMSHPI NT DSHSVQII+PQKQLGRKSDMYVF CSY+HNVA KGKFIAFVS +AE+
Sbjct: 301 AIAIMSHPIPNTADSHSVQIIIPQKQLGRKSDMYVFCCSYSHNVASKGKFIAFVSAQAES 360

Query: 361 DHPESELKPGIDLLGQVDELFFDIYDRYEPVNEPSLDNCFVSTSYDATTHFETTVTDVLN 420
           ++P +ELKPGIDLLG VDELF D YDR+EP N+PS DNCF+STSYDATTHFE+TV DVL+
Sbjct: 361 ENPAAELKPGIDLLGPVDELFIDTYDRFEPTNDPSSDNCFISTSYDATTHFESTVMDVLS 420

Query: 421 MYTLITGKT 429
           +YT ITGKT
Sbjct: 421 IYTKITGKT 429



>Os03g0277000 Similar to GDP dissociation inhibitor protein OsGDI1
          Length = 447

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/428 (82%), Positives = 383/428 (89%)

Query: 1   MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKRFRGEDK 60
           MDEEYDVIVLGTGLKECI+SGLLSVDGLKVLHMDRNDYYGG+STSLNL +LWKRF+G + 
Sbjct: 1   MDEEYDVIVLGTGLKECIISGLLSVDGLKVLHMDRNDYYGGESTSLNLTKLWKRFKGNET 60

Query: 61  PPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPA 120
            P HLG S++YNVDMVPKFMMANG LVR LIHT VTKYL+FKAVDGS+V++ GKIHKVPA
Sbjct: 61  APEHLGVSKEYNVDMVPKFMMANGALVRVLIHTSVTKYLNFKAVDGSFVYNNGKIHKVPA 120

Query: 121 TDMEALKSPLMGLFEKRRARNFFIYVQDYDEADPKTHQGLDLTTMTTRELIAKYGLSDDT 180
           TD+EALKS LMGLFEKRRAR FFIYVQDY+E DPK+H+GLDL  +TTRE+I+KYGL DDT
Sbjct: 121 TDVEALKSNLMGLFEKRRARKFFIYVQDYEEDDPKSHEGLDLHKVTTREVISKYGLEDDT 180

Query: 181 VDFIGHALALHRDDRYLNEPAIDTVKRMKLYAESLARFQGGSPYIYPLYGLGELPQGFAR 240
           VDFIGHALALHRDD YL+EPAIDTVKRMKLYAESLARFQGGSPYIYPLYGL ELPQ FAR
Sbjct: 181 VDFIGHALALHRDDNYLDEPAIDTVKRMKLYAESLARFQGGSPYIYPLYGLAELPQAFAR 240

Query: 241 LSAVYGGTYMLNKPDCKVEFDMEGKVCGVTSEGETAKCKKVVCDPSYLPNKVRKIGKVAR 300
           LSAVYGGTYMLNK +CKVEFD  GK  GVTSEGETAKCKKVVCDPSYLP+KV+K+G+VAR
Sbjct: 241 LSAVYGGTYMLNKAECKVEFDENGKAYGVTSEGETAKCKKVVCDPSYLPDKVKKVGRVAR 300

Query: 301 AIAIMSHPIANTNDSHSVQIILPQKQLGRKSDMYVFGCSYTHNVAPKGKFIAFVSTEAET 360
           AI IM HPI +T DSHSVQIILP+KQL RKSDMYVF CSY HNVAPKGKFIAFVSTEAE 
Sbjct: 301 AICIMKHPIPDTKDSHSVQIILPKKQLKRKSDMYVFCCSYAHNVAPKGKFIAFVSTEAEA 360

Query: 361 DHPESELKPGIDLLGQVDELFFDIYDRYEPVNEPSLDNCFVSTSYDATTHFETTVTDVLN 420
           D PE ELKPGIDLLG V+E FFDIYDRYEP N    DNCFV+ SYDATTHFETTV DVL 
Sbjct: 361 DKPEIELKPGIDLLGPVEETFFDIYDRYEPTNTADEDNCFVTNSYDATTHFETTVKDVLA 420

Query: 421 MYTLITGK 428
           +Y+ ITGK
Sbjct: 421 LYSKITGK 428



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.137    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,672,722
Number of extensions: 623802
Number of successful extensions: 1208
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1208
Number of HSP's successfully gapped: 4
Length of query: 445
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 341
Effective length of database: 11,605,545
Effective search space: 3957490845
Effective search space used: 3957490845
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)