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Os05g0304400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to GDP dissociation inhibitor protein OsGDI2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.01) R2 : 0.00216
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0209 (0.021) R2dN8 : 0.00279 R2N8 : 0.00216
σ : 0.188
deviance : 16.27
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13 0.169 12.4 0.162 0.197 -0.301 0.0616 0.378 -0.0167 10 80.06 848 -- --
13.17 0.169 12.4 0.188 0.189 -0.307 0.218 -- -0.0167 10.3 80.39 901 -- --
13.01 0.168 12.4 0.16 0.197 -0.302 -- 0.425 -0.0173 10 80.2 849 -- --
13.35 0.17 12.4 0.196 0.185 -0.302 -- -- -0.0128 10.4 80.45 908 -- --
13.56 0.172 12.4 0.189 -- -0.352 -- 0.401 -0.0239 -- 79 1405 -- --
14.82 0.18 12.4 0.197 0.0566 -- 0.196 -- 0.0015 11.3 -- -- -- --
14.98 0.181 12.4 0.206 0.0559 -- -- -- 0.00242 11.8 -- -- -- --
13.61 0.172 12.4 0.189 -- -0.367 -- -- -0.0135 -- 78.66 1481 -- --
14.36 0.176 12.4 -- 0.19 -0.309 -- -- -0.034 10.2 81 889 -- --
15.17 0.182 12.4 0.204 -- -- -- -- 0.00172 -- -- -- -- --
16.09 0.188 12.4 -- 0.0535 -- -- -- -0.0205 11.6 -- -- -- --
14.55 0.178 12.4 -- -- -0.384 -- -- -0.0354 -- 78.77 1463 -- --
16.27 0.188 12.4 -- -- -- -- -- -0.0209 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.67 radiation 1.0 30 > th dose independent rect. 18 17
2 11.73 radiation 1.0 30 > th dose independent rect. 5 6
25 11.85 radiation 1.0 90 > th dose independent sin 9 NA
26 11.86 radiation 1.0 270 > th dose independent rect. 18 13
28 11.93 radiation 1.0 90 < th dose dependent sin 9 NA
29 11.94 atmosphere 1015.0 30 < th dose independent rect. 11 18
30 11.94 radiation 10.0 10 < th dose dependent sin 9 NA
31 11.95 temperature 10.0 10 > th dose dependent rect. 5 6
36 11.99 radiation 1.0 90 < th dose independent sin 10 NA
39 12.00 radiation 1.0 270 > th dose independent rect. 4 3
52 12.03 wind 7.0 30 < th dose independent rect. 5 6
55 12.03 wind 9.0 90 < th dose dependent rect. 5 6
56 12.03 humidity 50.0 30 > th dose dependent rect. 11 18
58 12.04 precipitation 0.1 30 < th dose independent rect. 5 6
59 12.04 precipitation 0.1 30 < th dose dependent rect. 5 6
61 12.05 temperature 10.0 30 > th dose independent rect. 5 6
63 12.05 humidity 50.0 30 > th dose independent rect. 5 6
64 12.05 atmosphere 995.0 30 > th dose independent rect. 5 6
65 12.05 atmosphere 1015.0 30 < th dose independent rect. 5 6
66 12.05 temperature 10.0 30 > th dose independent rect. 11 18
88 12.08 wind 9.0 30 < th dose independent rect. 11 18
102 12.10 humidity 50.0 30 > th dose independent rect. 11 18
115 12.13 wind 9.0 270 < th dose dependent rect. 5 2
117 12.14 precipitation 0.1 270 < th dose independent rect. 5 2
130 12.14 precipitation 0.1 270 < th dose dependent rect. 5 2
134 12.15 humidity 70.0 270 > th dose independent rect. 5 2
135 12.15 radiation 20.0 270 < th dose independent rect. 5 2
138 12.16 wind 5.0 270 < th dose independent rect. 5 2
141 12.16 temperature 10.0 270 > th dose independent rect. 5 2
143 12.16 temperature 30.0 270 < th dose independent rect. 5 2
144 12.16 humidity 50.0 270 > th dose independent rect. 5 2
146 12.16 atmosphere 995.0 270 > th dose independent rect. 5 2
147 12.16 atmosphere 1015.0 270 < th dose independent rect. 5 2
170 12.16 temperature 10.0 270 > th dose independent rect. 7 22
173 12.16 temperature 10.0 270 > th dose dependent rect. 5 2
184 12.18 humidity 50.0 270 > th dose independent rect. 8 21
205 12.22 temperature 15.0 270 > th dose independent rect. 13 10
223 12.24 wind 9.0 270 < th dose independent rect. 7 22
226 12.25 precipitation 0.1 270 < th dose independent rect. 3 6
227 12.25 atmosphere 995.0 30 > th dose independent rect. 11 18
228 12.25 precipitation 0.1 30 < th dose independent rect. 11 18
230 12.25 precipitation 0.1 270 < th dose dependent rect. 3 6
232 12.25 precipitation 0.1 30 < th dose dependent rect. 11 18
260 12.29 radiation 40.0 270 < th dose dependent rect. 5 2
263 12.29 atmosphere 995.0 30 > th dose dependent rect. 5 6
274 12.31 radiation 40.0 30 < th dose independent rect. 5 6
302 12.33 humidity 50.0 270 > th dose dependent rect. 5 2
320 12.34 atmosphere 1015.0 270 < th dose independent rect. 8 20
328 12.35 wind 1.0 30 > th dose independent rect. 5 6
329 12.35 temperature 20.0 90 > th dose independent rect. 23 6
344 12.36 wind 7.0 270 < th dose independent rect. 3 6
345 12.36 temperature 30.0 30 < th dose independent rect. 5 6
349 12.37 radiation 40.0 270 < th dose independent rect. 3 6
356 12.37 humidity 50.0 270 > th dose dependent rect. 8 20
361 12.38 temperature 10.0 270 > th dose independent rect. 3 6
364 12.38 humidity 50.0 270 > th dose independent rect. 3 6
365 12.38 atmosphere 995.0 270 > th dose independent rect. 3 6
366 12.38 atmosphere 1015.0 270 < th dose independent rect. 3 6
393 12.40 temperature 30.0 270 < th dose independent rect. 3 6
394 12.40 wind 1.0 90 > th dose independent rect. 11 18
411 12.43 temperature 30.0 10 < th dose independent rect. 11 18
427 12.45 temperature 15.0 270 > th dose independent rect. 16 16
437 12.46 humidity 80.0 1440 > th dose dependent rect. 11 2
459 12.49 temperature 20.0 10 > th dose independent rect. 23 6
466 12.49 humidity 50.0 270 > th dose dependent rect. 19 9
478 12.50 humidity 90.0 30 < th dose independent rect. 16 19
481 12.50 humidity 80.0 1440 > th dose dependent rect. 10 4
504 12.51 humidity 60.0 90 > th dose dependent rect. 21 8
525 12.52 atmosphere 995.0 270 > th dose dependent rect. 5 2
539 12.54 temperature 15.0 90 > th dose independent rect. 5 18
546 12.54 temperature 10.0 90 > th dose dependent rect. 23 6
572 12.56 precipitation 0.1 270 < th dose independent rect. 7 22
575 12.56 precipitation 0.1 270 < th dose dependent rect. 7 22
587 12.57 radiation 1.0 270 > th dose dependent rect. 17 14
588 12.58 temperature 10.0 1440 > th dose independent rect. 7 5
591 12.58 atmosphere 995.0 1440 > th dose independent rect. 7 5
592 12.58 precipitation 0.1 270 < th dose independent rect. 16 16
594 12.58 temperature 10.0 1440 > th dose independent rect. 12 19
598 12.58 precipitation 0.1 270 < th dose dependent rect. 16 16
605 12.59 precipitation 0.1 270 < th dose independent rect. 8 20
609 12.59 humidity 60.0 30 > th dose dependent rect. 13 16
610 12.59 precipitation 0.1 270 < th dose dependent rect. 8 20
625 12.61 humidity 90.0 30 < th dose independent rect. 14 21
650 12.63 temperature 15.0 270 > th dose independent rect. 3 19
654 12.63 temperature 10.0 270 > th dose dependent rect. 21 7
676 12.64 radiation 1.0 90 < th dose dependent rect. 23 15
678 12.64 wind 9.0 90 < th dose dependent rect. 11 18
710 12.65 humidity 60.0 90 > th dose dependent rect. 23 6
715 12.65 radiation 1.0 90 < th dose dependent rect. 23 12
738 12.66 humidity 90.0 30 < th dose independent rect. 5 6
754 12.66 radiation 1.0 90 < th dose dependent rect. 23 18
759 12.67 atmosphere 1015.0 270 < th dose independent rect. 23 14
761 12.67 atmosphere 995.0 270 > th dose independent rect. 8 20
765 12.67 radiation 1.0 90 < th dose dependent rect. 23 8
772 12.68 humidity 80.0 1440 > th dose independent rect. 10 4
780 12.68 radiation 40.0 90 < th dose independent rect. 11 18
788 12.68 temperature 15.0 10 > th dose dependent rect. 23 6
807 12.69 precipitation 0.1 270 < th dose independent rect. 13 10
813 12.69 precipitation 0.1 270 < th dose dependent rect. 13 10
821 12.70 wind 1.0 270 > th dose independent rect. 5 2
826 12.70 humidity 80.0 90 > th dose independent rect. 23 6
829 12.70 temperature 15.0 10 > th dose independent rect. 18 17
834 12.70 temperature 15.0 270 > th dose independent rect. 12 23
842 12.70 radiation 1.0 90 < th dose dependent rect. 20 23
874 12.72 radiation 1.0 90 < th dose independent rect. 23 7
877 12.72 radiation 1.0 90 < th dose independent rect. 23 15
882 12.72 precipitation 0.1 90 < th dose independent rect. 5 18
891 12.72 precipitation 0.1 90 < th dose dependent rect. 5 18
901 12.73 temperature 15.0 270 > th dose independent rect. 14 19
909 12.73 humidity 60.0 90 > th dose dependent rect. 17 12
913 12.74 humidity 80.0 1440 < th dose independent rect. 10 4
918 12.74 radiation 1.0 90 < th dose independent rect. 23 12
921 12.74 precipitation 0.1 270 < th dose independent rect. 4 16
934 12.74 precipitation 0.1 270 < th dose dependent rect. 4 16
938 12.74 radiation 1.0 90 < th dose dependent rect. 21 20
943 12.75 atmosphere 1015.0 90 < th dose independent rect. 23 6
944 12.75 humidity 80.0 270 > th dose independent rect. 20 8
952 12.75 temperature 15.0 10 > th dose independent rect. 16 19
970 12.76 radiation 1.0 90 < th dose independent rect. 23 18
974 12.76 radiation 1.0 90 < th dose dependent rect. 21 10
975 12.76 radiation 1.0 90 < th dose dependent rect. 21 14
988 12.77 temperature 10.0 270 > th dose independent rect. 23 14
989 12.77 atmosphere 995.0 270 > th dose independent rect. 23 14
995 12.77 precipitation 0.1 270 < th dose independent rect. 12 23