Os05g0418000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : GDP dissociation inhibitor protein OsGDI1.
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Os05g0418000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : GDP dissociation inhibitor protein OsGDI1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.77 | 0.198 | 14.3 | 0.524 | 0.302 | -0.3 | 0.0272 | -2.69 | 0.302 | 22.2 | 14.61 | 18289 | -- | -- |
| 23.99 | 0.23 | 14.2 | 0.993 | 0.338 | 0.264 | 0.00203 | -- | 0.432 | 22.9 | 13.1 | 21664 | -- | -- |
| 17.7 | 0.196 | 14.3 | 0.516 | 0.298 | -0.296 | -- | -2.72 | 0.287 | 22.1 | 13.44 | 19033 | -- | -- |
| 23.22 | 0.224 | 14.1 | 1.22 | 0.35 | -0.236 | -- | -- | 0.576 | 22.2 | 30.92 | 47520 | -- | -- |
| 23.07 | 0.224 | 14.3 | 0.538 | -- | -0.288 | -- | -2.65 | 0.303 | -- | 12.19 | 18922 | -- | -- |
| 24.65 | 0.233 | 14.1 | 1.04 | 0.297 | -- | -0.00629 | -- | 0.468 | 22.1 | -- | -- | -- | -- |
| 24.65 | 0.233 | 14.1 | 1.04 | 0.297 | -- | -- | -- | 0.469 | 22.1 | -- | -- | -- | -- |
| 28.4 | 0.248 | 14.1 | 1.28 | -- | -0.245 | -- | -- | 0.569 | -- | 31.2 | 47520 | -- | -- |
| 32.18 | 0.264 | 14.2 | -- | 0.284 | 0.736 | -- | -- | 0.132 | 22 | 7.74 | 47520 | -- | -- |
| 29.97 | 0.256 | 14.1 | 1.05 | -- | -- | -- | -- | 0.469 | -- | -- | -- | -- | -- |
| 53.38 | 0.342 | 14.2 | -- | 0.302 | -- | -- | -- | 0.352 | 22.4 | -- | -- | -- | -- |
| 36.92 | 0.283 | 14.2 | -- | -- | 0.757 | -- | -- | 0.122 | -- | 7.527 | 46878 | -- | -- |
| 58.95 | 0.358 | 14.2 | -- | -- | -- | -- | -- | 0.353 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.54 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 3 | 16.62 | wind | 5.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 5 | 16.66 | wind | 5.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 7 | 16.69 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 9 | 16.76 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 34 | 16.99 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 44 | 17.05 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 52 | 17.08 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 67 | 17.14 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 79 | 17.17 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 82 | 17.18 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 263 | 17.46 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 311 | 17.51 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 379 | 17.58 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 13 |
| 404 | 17.60 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 425 | 17.62 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 431 | 17.62 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 441 | 17.63 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 11 |
| 446 | 17.64 | humidity | 90.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 455 | 17.64 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 15 |
| 479 | 17.66 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 493 | 17.66 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 509 | 17.68 | temperature | 20.0 | 43200 | > th | dose independent | sin | 17 | NA |
| 667 | 17.76 | temperature | 20.0 | 43200 | < th | dose independent | sin | 16 | NA |
| 669 | 17.76 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 770 | 17.80 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 773 | 17.80 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 801 | 17.81 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 886 | 17.84 | wind | 3.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 906 | 17.85 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 907 | 17.85 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 916 | 17.85 | wind | 5.0 | 43200 | > th | dose independent | rect. | 21 | 15 |
| 917 | 17.85 | wind | 5.0 | 43200 | < th | dose independent | rect. | 21 | 15 |
| 926 | 17.85 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 927 | 17.85 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 935 | 17.86 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 13 | 1 |