Os03g0277000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to GDP dissociation inhibitor protein OsGDI1.
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Os03g0277000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to GDP dissociation inhibitor protein OsGDI1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 228.68 | 0.71 | 3.35 | -0.943 | 1.08 | -0.674 | -1.76 | 2.42 | -0.0535 | 3.57 | 0.12 | 95 | -- | -- |
| 244.35 | 0.734 | 3.31 | -0.736 | 0.793 | 0.0537 | -2.28 | -- | 0.0324 | 7.58 | 0.12 | 95 | -- | -- |
| 233.61 | 0.712 | 3.35 | -0.911 | 1.25 | -0.84 | -- | 1.54 | -0.0529 | 3.19 | 0.11 | 103 | -- | -- |
| 247.34 | 0.732 | 3.34 | -0.864 | 1.25 | -0.819 | -- | -- | -0.0324 | 3.27 | 0.25 | 100 | -- | -- |
| 266.68 | 0.765 | 3.33 | -0.835 | -- | -0.262 | -- | 1.57 | 0.0256 | -- | 0.2999 | 44 | -- | -- |
| 244.51 | 0.733 | 3.31 | -0.744 | 0.767 | -- | -2.25 | -- | 0.0281 | 7.43 | -- | -- | -- | -- |
| 256.57 | 0.75 | 3.31 | -0.802 | 0.795 | -- | -- | -- | 0.0282 | 6.6 | -- | -- | -- | -- |
| 282.44 | 0.786 | 3.33 | -0.795 | -- | -0.255 | -- | -- | 0.0399 | -- | 0.3799 | 55 | -- | -- |
| 266.44 | 0.76 | 3.31 | -- | 1.11 | -0.703 | -- | -- | 0.0715 | 3.46 | 1.41 | 83 | -- | -- |
| 289.55 | 0.795 | 3.33 | -0.783 | -- | -- | -- | -- | 0.0444 | -- | -- | -- | -- | -- |
| 273.54 | 0.774 | 3.29 | -- | 0.785 | -- | -- | -- | 0.118 | 6.66 | -- | -- | -- | -- |
| 298.99 | 0.808 | 3.31 | -- | -- | -0.249 | -- | -- | 0.128 | -- | 1.41 | 83 | -- | -- |
| 305.73 | 0.816 | 3.31 | -- | -- | -- | -- | -- | 0.131 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 214.66 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 4 | 219.03 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 6 | 219.32 | radiation | 1.0 | 30 | < th | dose dependent | sin | 10 | NA |
| 7 | 219.56 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 8 | 219.79 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 16 | 220.32 | radiation | 1.0 | 90 | < th | dose independent | sin | 11 | NA |
| 22 | 220.76 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 34 | 221.39 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 51 | 222.33 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 8 | 6 |
| 58 | 222.76 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 7 |
| 62 | 222.86 | radiation | 1.0 | 90 | > th | dose independent | sin | 10 | NA |
| 65 | 222.94 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 6 |
| 84 | 223.26 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 8 |
| 87 | 223.39 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 7 |
| 95 | 223.65 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 22 | 8 |
| 96 | 223.66 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 97 | 223.67 | radiation | 10.0 | 30 | < th | dose independent | rect. | 22 | 8 |
| 106 | 223.83 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 112 | 223.91 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 16 |
| 117 | 224.02 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 13 |
| 130 | 224.16 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 177 | 224.62 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 14 | 18 |
| 179 | 224.65 | temperature | 25.0 | 270 | > th | dose independent | rect. | 24 | 13 |
| 185 | 224.68 | temperature | 20.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 199 | 224.81 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 16 |
| 202 | 224.85 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 18 |
| 208 | 224.92 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 13 |
| 218 | 225.00 | temperature | 25.0 | 270 | < th | dose independent | sin | 7 | NA |
| 250 | 225.22 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 10 |
| 267 | 225.30 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 7 |
| 308 | 225.52 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 330 | 225.60 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 339 | 225.66 | temperature | 25.0 | 90 | > th | dose independent | rect. | 7 | 7 |
| 352 | 225.70 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 387 | 225.89 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 5 | 2 |
| 392 | 225.90 | wind | 1.0 | 30 | < th | dose independent | rect. | 6 | 2 |
| 411 | 225.98 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 420 | 226.02 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 4 |
| 423 | 226.04 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 438 | 226.10 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 16 |
| 488 | 226.31 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 532 | 226.44 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 22 | 8 |
| 536 | 226.48 | temperature | 25.0 | 270 | > th | dose independent | sin | 6 | NA |
| 539 | 226.49 | wind | 5.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 552 | 226.58 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 601 | 226.76 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 7 | 23 |
| 616 | 226.83 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 4 |
| 621 | 226.86 | humidity | 90.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 645 | 226.91 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 16 |
| 682 | 227.01 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 1 | 13 |
| 712 | 227.11 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 16 |
| 740 | 227.22 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 753 | 227.27 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 769 | 227.31 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 874 | 227.58 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 875 | 227.58 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 877 | 227.58 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 878 | 227.58 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 881 | 227.58 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 882 | 227.58 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 885 | 227.58 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 901 | 227.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 902 | 227.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 908 | 227.66 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 22 | 8 |
| 911 | 227.66 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 912 | 227.66 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 22 | 8 |
| 942 | 227.78 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 953 | 227.78 | temperature | 25.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 954 | 227.79 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 959 | 227.81 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 22 | 8 |