BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0277000 Os03g0277000|AK100522
(447 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G09550.1 | chr5:2963850-2966465 FORWARD LENGTH=446 761 0.0
AT3G59920.1 | chr3:22135157-22138221 FORWARD LENGTH=445 739 0.0
AT2G44100.1 | chr2:18241804-18244864 FORWARD LENGTH=446 736 0.0
AT3G06540.1 | chr3:2035201-2037662 REVERSE LENGTH=564 98 9e-21
>AT5G09550.1 | chr5:2963850-2966465 FORWARD LENGTH=446
Length = 445
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/437 (82%), Positives = 397/437 (90%)
Query: 1 MDEEYDVIVLGTGLKECIISGLLSVDGLKVLHMDRNDYYGGESTSLNLTKLWKRFKGNET 60
MDEEYDVIVLGTGLKECI+SGLLSVDGLKVLHMDRNDYYGGES+SLNLT+LWKRF+G++T
Sbjct: 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLTQLWKRFRGSDT 60
Query: 61 APEHLGVSKEYNVDMVPKFMMANGALVRVLIHTSVTKYLNFKAVDGSFVYNNGKIHKVPA 120
E+LG S+EYNVDM+PKF+MANG LV+ LIHT VTKYLNFKAVDGSFVY GKI+KVPA
Sbjct: 61 PEENLGASREYNVDMIPKFIMANGLLVQTLIHTDVTKYLNFKAVDGSFVYKKGKIYKVPA 120
Query: 121 TDVEALKSNLMGLFEKRRARKFFIYVQDYEEDDPKSHEGLDLHKVTTREVISKYGLEDDT 180
TDVEALKS LMGLFEKRRARKFFIYVQDY+E DPKSHEGLDL KVT RE+ISKYGLEDDT
Sbjct: 121 TDVEALKSPLMGLFEKRRARKFFIYVQDYDEKDPKSHEGLDLSKVTAREIISKYGLEDDT 180
Query: 181 VDFIGHALALHRDDNYLDEPAIDTVKRMKLYAESLARFQGGSPYIYPLYGLAELPQAFAR 240
+DFIGHALALH DD+YLD+PAID VKR+KLYAESLARFQGGSPYIYPLYGL ELPQAFAR
Sbjct: 181 IDFIGHALALHNDDDYLDQPAIDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFAR 240
Query: 241 LSAVYGGTYMLNKAECKVEFDENGKAYGVTSEGETAKCKKVVCDPSYLPDKVKKVGRVAR 300
LSAVYGGTYMLNK ECKVEFD +GKA GVTS GETAKCKKVVCDPSYL +KVKKVG+V R
Sbjct: 241 LSAVYGGTYMLNKPECKVEFDGSGKAIGVTSAGETAKCKKVVCDPSYLSEKVKKVGKVTR 300
Query: 301 AICIMKHPIPDTKDSHSVQIILPKKQLKRKSDMYVFCCSYAHNVAPKGKFIAFVSTEAEA 360
A+CIM HPIPDT D+HSVQIILP+KQL RKSDMY+FCCSYAHNVAPKGK+IAFVS EAE
Sbjct: 301 AVCIMSHPIPDTNDAHSVQIILPQKQLGRKSDMYLFCCSYAHNVAPKGKYIAFVSAEAET 360
Query: 361 DKPEIELKPGIDLLGPVEETFFDIYDRYEPTNTADEDNCFVTNSYDATTHFETTVKDVLA 420
D PE ELKPGI+LLGP +E F+ YD Y PTN +EDNCF++ +YDATTHFE+TV DVL
Sbjct: 361 DNPEEELKPGIELLGPTDEIFYHSYDTYVPTNIQEEDNCFISATYDATTHFESTVVDVLD 420
Query: 421 LYSKITGKELDLSVDLN 437
+Y+KITGK LDLSVDL+
Sbjct: 421 MYTKITGKTLDLSVDLS 437
>AT3G59920.1 | chr3:22135157-22138221 FORWARD LENGTH=445
Length = 444
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/437 (77%), Positives = 393/437 (89%)
Query: 1 MDEEYDVIVLGTGLKECIISGLLSVDGLKVLHMDRNDYYGGESTSLNLTKLWKRFKGNET 60
MDEEY+VIVLGTGLKECI+SGLLSVDG+KVLHMDRNDYYGGESTSLNL +LWK+F+G E
Sbjct: 1 MDEEYEVIVLGTGLKECILSGLLSVDGVKVLHMDRNDYYGGESTSLNLNQLWKKFRGEEK 60
Query: 61 APEHLGVSKEYNVDMVPKFMMANGALVRVLIHTSVTKYLNFKAVDGSFVYNNGKIHKVPA 120
APEHLG S++YNVDM+PKFMM NG LVR LIHT VTKYL+FKAVDGS+V+ GK+ KVPA
Sbjct: 61 APEHLGASRDYNVDMMPKFMMGNGKLVRTLIHTDVTKYLSFKAVDGSYVFVKGKVQKVPA 120
Query: 121 TDVEALKSNLMGLFEKRRARKFFIYVQDYEEDDPKSHEGLDLHKVTTREVISKYGLEDDT 180
T +EALKS+LMG+FEKRRA KFF +VQ+Y+E DPK+H+G+DL +VTT+E+I+KYGL+ +T
Sbjct: 121 TPMEALKSSLMGIFEKRRAGKFFSFVQEYDEKDPKTHDGMDLTRVTTKELIAKYGLDGNT 180
Query: 181 VDFIGHALALHRDDNYLDEPAIDTVKRMKLYAESLARFQGGSPYIYPLYGLAELPQAFAR 240
+DFIGHA+ALH +D +LD+PA DTV RMKLYAESLARFQG SPYIYPLYGL ELPQAFAR
Sbjct: 181 IDFIGHAVALHTNDQHLDQPAFDTVMRMKLYAESLARFQGTSPYIYPLYGLGELPQAFAR 240
Query: 241 LSAVYGGTYMLNKAECKVEFDENGKAYGVTSEGETAKCKKVVCDPSYLPDKVKKVGRVAR 300
LSAVYGGTYMLNK ECKVEFDE GK GVTSEGETAKCKK+VCDPSYLP+KV+K+GRVAR
Sbjct: 241 LSAVYGGTYMLNKPECKVEFDEGGKVIGVTSEGETAKCKKIVCDPSYLPNKVRKIGRVAR 300
Query: 301 AICIMKHPIPDTKDSHSVQIILPKKQLKRKSDMYVFCCSYAHNVAPKGKFIAFVSTEAEA 360
AI IM HPIP+T DSHSVQ+I+P+KQL RKSDMYVFCCSY+HNVAPKGKFIAFVST+AE
Sbjct: 301 AIAIMSHPIPNTNDSHSVQVIIPQKQLARKSDMYVFCCSYSHNVAPKGKFIAFVSTDAET 360
Query: 361 DKPEIELKPGIDLLGPVEETFFDIYDRYEPTNTADEDNCFVTNSYDATTHFETTVKDVLA 420
D P+ ELKPG DLLGPV+E FFD+YDRYEP N + DNCF++ SYDATTHFETTV DVL
Sbjct: 361 DNPQTELKPGTDLLGPVDEIFFDMYDRYEPVNEPELDNCFISTSYDATTHFETTVADVLN 420
Query: 421 LYSKITGKELDLSVDLN 437
+Y+ ITGK+LDLSVDL+
Sbjct: 421 MYTLITGKQLDLSVDLS 437
>AT2G44100.1 | chr2:18241804-18244864 FORWARD LENGTH=446
Length = 445
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/437 (78%), Positives = 392/437 (89%)
Query: 1 MDEEYDVIVLGTGLKECIISGLLSVDGLKVLHMDRNDYYGGESTSLNLTKLWKRFKGNET 60
MDEEY+VIVLGTGLKECI+SGLLSVDGLKVLHMDRNDYYGGESTSLNL +LWK+F+G E
Sbjct: 1 MDEEYEVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESTSLNLNQLWKKFRGEEK 60
Query: 61 APEHLGVSKEYNVDMVPKFMMANGALVRVLIHTSVTKYLNFKAVDGSFVYNNGKIHKVPA 120
AP HLG S++YNVDM+PKFMMANG LVRVLIHT VTKYL+FKAVDGS+V+ GK+ KVPA
Sbjct: 61 APAHLGSSRDYNVDMMPKFMMANGKLVRVLIHTDVTKYLSFKAVDGSYVFVQGKVQKVPA 120
Query: 121 TDVEALKSNLMGLFEKRRARKFFIYVQDYEEDDPKSHEGLDLHKVTTREVISKYGLEDDT 180
T +EALKS LMG+FEKRRA KFF YVQ+Y+E DPK+H+G+DL +VTT+++I+K+GL++DT
Sbjct: 121 TPMEALKSPLMGIFEKRRAGKFFSYVQEYDEKDPKTHDGMDLRRVTTKDLIAKFGLKEDT 180
Query: 181 VDFIGHALALHRDDNYLDEPAIDTVKRMKLYAESLARFQGGSPYIYPLYGLAELPQAFAR 240
+DFIGHA+ALH +DN+L +PA DTV RMKLYAESLARFQGGSPYIYPLYGL ELPQAFAR
Sbjct: 181 IDFIGHAVALHCNDNHLHQPAYDTVMRMKLYAESLARFQGGSPYIYPLYGLGELPQAFAR 240
Query: 241 LSAVYGGTYMLNKAECKVEFDENGKAYGVTSEGETAKCKKVVCDPSYLPDKVKKVGRVAR 300
LSAVYGGTYMLNK ECKVEFDE GK GVTSEGETAKCKKVVCDPSYL +KV+K+GRVAR
Sbjct: 241 LSAVYGGTYMLNKPECKVEFDEEGKVSGVTSEGETAKCKKVVCDPSYLTNKVRKIGRVAR 300
Query: 301 AICIMKHPIPDTKDSHSVQIILPKKQLKRKSDMYVFCCSYAHNVAPKGKFIAFVSTEAEA 360
AI IM HPIP+T DS SVQ+ILP+KQL RKSDMYVFCCSY+HNVAPKGKFIAFVST+AE
Sbjct: 301 AIAIMSHPIPNTNDSQSVQVILPQKQLGRKSDMYVFCCSYSHNVAPKGKFIAFVSTDAET 360
Query: 361 DKPEIELKPGIDLLGPVEETFFDIYDRYEPTNTADEDNCFVTNSYDATTHFETTVKDVLA 420
D P+ EL+PGIDLLGPV+E FFDIYDRYEP N DNCF++ SYDATTHF+TTV DVL
Sbjct: 361 DNPQTELQPGIDLLGPVDELFFDIYDRYEPVNEPTLDNCFISTSYDATTHFDTTVVDVLN 420
Query: 421 LYSKITGKELDLSVDLN 437
+Y ITGKELDLSVDLN
Sbjct: 421 MYKLITGKELDLSVDLN 437
>AT3G06540.1 | chr3:2035201-2037662 REVERSE LENGTH=564
Length = 563
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 180/442 (40%), Gaps = 93/442 (21%)
Query: 5 YDVIVLGTGLKECIISGLLSVDGLKVLHMDRNDYYGGESTSLNLTKLWKRFKG------- 57
YD+IV+GTG+ E +++ S G VLH+D N +YG SL+L L
Sbjct: 15 YDLIVVGTGVSESVLAAAASSSGSSVLHLDPNPFYGSHFASLSLPDLTSFLHSNSVSPPP 74
Query: 58 -----------------------------------NETAPEHLGVSKEYNVDMV-PKFMM 81
+E EH S+ +NVD+ P+ +
Sbjct: 75 SPSSPPLPPSNNHDFISVDLVNRSLYSSVEISSFESEILEEH---SRRFNVDLAGPRVVF 131
Query: 82 ANGALVRVLIHTSVTKYLNFKAVDGSFVYNN-GKIHKVPATDVEALKSNLMGLFEKRRAR 140
+ +++ + Y+ FK++D SFV ++ G++ VP + K + L EK +
Sbjct: 132 CADESINLMLKSGANNYVEFKSIDASFVGDSSGELRNVPDSRAAIFKDKSLTLLEKNQLM 191
Query: 141 KFFIYVQDY-----EEDDPK----SHEGLDLHKVTTREVISKYGLEDDTVDFIGHALALH 191
KFF VQ + E+DD S E ++ V + +SK L I +A+A+
Sbjct: 192 KFFKLVQSHLASSTEKDDSTTVKISEEDMESPFV---DFLSKMRLPPKIKSIILYAIAML 248
Query: 192 RDDNYLDEPAIDTVK------RMKLYAESLARFQGG-SPYIYPLYGLAELPQAFARLSAV 244
D E +K R+ LY S+ RF IYP+YG ELPQAF R +AV
Sbjct: 249 DYDQDNTETCRHLLKTKEGIDRLALYITSMGRFSNALGALIYPIYGQGELPQAFCRRAAV 308
Query: 245 YGGTYMLNKAECKVEFD-ENGKAYGV-TSEGETAKCKKVVCDPS---------------- 286
G Y+L + D E G GV + G+ +K++ DP
Sbjct: 309 KGCIYVLRMPITALLLDKETGGYKGVRLASGQEIFSQKLILDPCVTVGLESLSSLTDQQN 368
Query: 287 -----YLPDKVKKVGRVARAICIMKHPIPDTKDSHSVQIILPKKQL--KRKSDMYVFCCS 339
+P + ++AR +C+++ + + + ++ P K L ++ + + V
Sbjct: 369 ETLSVLVPKSMINKEKIARGVCVIRGSV--KANVSNALVVYPPKSLFPEQLTAIRVLQLG 426
Query: 340 YAHNVAPKGKFIAFVSTEAEAD 361
V P + ++ST + D
Sbjct: 427 SGLAVCPADMHVLYLSTLCDND 448
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.136 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,106,361
Number of extensions: 455353
Number of successful extensions: 1072
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1070
Number of HSP's successfully gapped: 5
Length of query: 447
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 345
Effective length of database: 8,310,137
Effective search space: 2866997265
Effective search space used: 2866997265
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)