Os07g0271000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to GDP dissociation inhibitor protein OsGDI1.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0271000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to GDP dissociation inhibitor protein OsGDI1.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.24 | 0.473 | 7.67 | 2.9 | 0.992 | -0.419 | -0.77 | -3.68 | 0.773 | 5.91 | 13.82 | 1590 | -- | -- |
| 106.57 | 0.481 | 7.59 | 3.74 | 0.989 | -0.566 | -0.815 | -- | 0.894 | 5.83 | 27 | 3374 | -- | -- |
| 102.48 | 0.471 | 7.67 | 2.87 | 0.997 | -0.401 | -- | -3.7 | 0.767 | 5.88 | 14.2 | 1457 | -- | -- |
| 108.08 | 0.484 | 7.58 | 3.73 | 0.98 | -0.554 | -- | -- | 0.92 | 5.8 | 26.01 | 3329 | -- | -- |
| 133.87 | 0.539 | 7.58 | 3.79 | -- | -1.15 | -- | 0.0122 | 1.05 | -- | 23.7 | 388 | -- | -- |
| 115.85 | 0.505 | 7.59 | 3.57 | 0.987 | -- | -0.838 | -- | 0.905 | 5.96 | -- | -- | -- | -- |
| 117.57 | 0.508 | 7.59 | 3.56 | 0.983 | -- | -- | -- | 0.908 | 5.97 | -- | -- | -- | -- |
| 133.71 | 0.539 | 7.57 | 3.78 | -- | -1.08 | -- | -- | 1.05 | -- | 23.8 | 399 | -- | -- |
| 433.09 | 0.969 | 7.71 | -- | 1.33 | 1.36 | -- | -- | 0.341 | 4.97 | 14.38 | 27 | -- | -- |
| 167.61 | 0.605 | 7.6 | 3.59 | -- | -- | -- | -- | 0.931 | -- | -- | -- | -- | -- |
| 451.47 | 0.994 | 7.68 | -- | 1.04 | -- | -- | -- | 0.512 | 5.8 | -- | -- | -- | -- |
| 499.38 | 1.04 | 7.69 | -- | -- | -0.514 | -- | -- | 0.565 | -- | 24.75 | 364 | -- | -- |
| 507.26 | 1.05 | 7.69 | -- | -- | -- | -- | -- | 0.533 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.29 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 3 | 100.32 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 4 | 100.54 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 5 | 100.54 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 6 | 100.54 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 8 | 100.66 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 9 | 100.69 | wind | 7.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 10 | 100.70 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 11 | 100.79 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 15 | 100.84 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 17 | 100.89 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 18 | 100.93 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 21 | 101.01 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 25 | 101.08 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 27 | 101.11 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 28 | 101.11 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 7 |
| 33 | 101.18 | wind | 1.0 | 43200 | > th | dose independent | rect. | 15 | 9 |
| 39 | 101.26 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 41 | 101.26 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 43 | 101.27 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 3 | 19 |
| 44 | 101.28 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 20 | 19 |
| 90 | 101.36 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 9 | 17 |
| 117 | 101.39 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 149 | 101.42 | temperature | 10.0 | 1440 | > th | dose dependent | no | NA | NA |
| 215 | 101.48 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 223 | 101.49 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 255 | 101.52 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 272 | 101.53 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 18 | NA |
| 282 | 101.54 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 3 | NA |
| 298 | 101.56 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 306 | 101.57 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 3 | 12 |
| 335 | 101.59 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 10 |
| 357 | 101.61 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 358 | 101.61 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 384 | 101.63 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 386 | 101.63 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 20 | 5 |
| 387 | 101.63 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 393 | 101.64 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 398 | 101.64 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 428 | 101.66 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 448 | 101.67 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 10 |
| 460 | 101.68 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 8 |
| 470 | 101.68 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 5 | 21 |
| 472 | 101.69 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 491 | 101.70 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 492 | 101.70 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 18 | 9 |
| 506 | 101.71 | wind | 1.0 | 43200 | < th | dose independent | rect. | 15 | 9 |
| 524 | 101.72 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 17 | 14 |
| 539 | 101.73 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 17 | 14 |
| 568 | 101.75 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 578 | 101.75 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 13 | 13 |
| 586 | 101.75 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 3 | 19 |
| 616 | 101.77 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 13 | 11 |
| 620 | 101.77 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 13 |
| 657 | 101.79 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 659 | 101.80 | temperature | 10.0 | 4320 | > th | dose dependent | sin | 12 | NA |
| 778 | 101.85 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 5 |
| 795 | 101.86 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 11 | NA |
| 853 | 101.88 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 954 | 101.93 | temperature | 30.0 | 1440 | < th | dose dependent | no | NA | NA |
| 999 | 101.95 | wind | 7.0 | 14400 | < th | dose independent | rect. | 8 | 1 |