BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0271000 Os07g0271000|AK069636
(446 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G59920.1 | chr3:22135157-22138221 FORWARD LENGTH=445 732 0.0
AT2G44100.1 | chr2:18241804-18244864 FORWARD LENGTH=446 732 0.0
AT5G09550.1 | chr5:2963850-2966465 FORWARD LENGTH=446 713 0.0
AT3G06540.1 | chr3:2035201-2037662 REVERSE LENGTH=564 102 5e-22
>AT3G59920.1 | chr3:22135157-22138221 FORWARD LENGTH=445
Length = 444
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/428 (80%), Positives = 378/428 (88%)
Query: 1 MDVEYDVIVLGTGLKECILSGLLSVDRLKVLHMDRNDYYGGDSTSLNLNQLWKRFKGEGT 60
MD EY+VIVLGTGLKECILSGLLSVD +KVLHMDRNDYYGG+STSLNLNQLWK+F+GE
Sbjct: 1 MDEEYEVIVLGTGLKECILSGLLSVDGVKVLHMDRNDYYGGESTSLNLNQLWKKFRGEEK 60
Query: 61 PPAQIGASRDYNVDMIPKFMMANGTLVRVLIHTGVTKYLSFKAVDGSYVFNKGKIHKVPS 120
P +GASRDYNVDM+PKFMM NG LVR LIHT VTKYLSFKAVDGSYVF KGK+ KVP+
Sbjct: 61 APEHLGASRDYNVDMMPKFMMGNGKLVRTLIHTDVTKYLSFKAVDGSYVFVKGKVQKVPA 120
Query: 121 TDMEALKSPLMGLFEKRRAGKFFLFVQDYKENDPSTHKGYDLNKMTTKELISKYGLDDNT 180
T MEALKS LMG+FEKRRAGKFF FVQ+Y E DP TH G DL ++TTKELI+KYGLD NT
Sbjct: 121 TPMEALKSSLMGIFEKRRAGKFFSFVQEYDEKDPKTHDGMDLTRVTTKELIAKYGLDGNT 180
Query: 181 IDFIGHAVALHKEDNYLTEPAIDTVKRMKLYAESVGRFQGGSPYIYPLYGLGELPQGFAR 240
IDFIGHAVALH D +L +PA DTV RMKLYAES+ RFQG SPYIYPLYGLGELPQ FAR
Sbjct: 181 IDFIGHAVALHTNDQHLDQPAFDTVMRMKLYAESLARFQGTSPYIYPLYGLGELPQAFAR 240
Query: 241 LSAVYGGTYMLNKPECKIEFNDEGKVCGVTSEGETAKCKKVVCDPSYIPDKVRKVGKVFR 300
LSAVYGGTYMLNKPECK+EF++ GKV GVTSEGETAKCKK+VCDPSY+P+KVRK+G+V R
Sbjct: 241 LSAVYGGTYMLNKPECKVEFDEGGKVIGVTSEGETAKCKKIVCDPSYLPNKVRKIGRVAR 300
Query: 301 AIAIMSHPIPNTADSHSVQIIIPQKQLGRKSDMYVFCCSYSHNVASKGKFIAFVSAQAES 360
AIAIMSHPIPNT DSHSVQ+IIPQKQL RKSDMYVFCCSYSHNVA KGKFIAFVS AE+
Sbjct: 301 AIAIMSHPIPNTNDSHSVQVIIPQKQLARKSDMYVFCCSYSHNVAPKGKFIAFVSTDAET 360
Query: 361 ENPAAELKPGIDLLGPVDELFIDTYDRFEPTNDPSSDNCFISTSYDATTHFESTVMDVLS 420
+NP ELKPG DLLGPVDE+F D YDR+EP N+P DNCFISTSYDATTHFE+TV DVL+
Sbjct: 361 DNPQTELKPGTDLLGPVDEIFFDMYDRYEPVNEPELDNCFISTSYDATTHFETTVADVLN 420
Query: 421 IYTKITGK 428
+YT ITGK
Sbjct: 421 MYTLITGK 428
>AT2G44100.1 | chr2:18241804-18244864 FORWARD LENGTH=446
Length = 445
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/428 (80%), Positives = 386/428 (90%)
Query: 1 MDVEYDVIVLGTGLKECILSGLLSVDRLKVLHMDRNDYYGGDSTSLNLNQLWKRFKGEGT 60
MD EY+VIVLGTGLKECILSGLLSVD LKVLHMDRNDYYGG+STSLNLNQLWK+F+GE
Sbjct: 1 MDEEYEVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESTSLNLNQLWKKFRGEEK 60
Query: 61 PPAQIGASRDYNVDMIPKFMMANGTLVRVLIHTGVTKYLSFKAVDGSYVFNKGKIHKVPS 120
PA +G+SRDYNVDM+PKFMMANG LVRVLIHT VTKYLSFKAVDGSYVF +GK+ KVP+
Sbjct: 61 APAHLGSSRDYNVDMMPKFMMANGKLVRVLIHTDVTKYLSFKAVDGSYVFVQGKVQKVPA 120
Query: 121 TDMEALKSPLMGLFEKRRAGKFFLFVQDYKENDPSTHKGYDLNKMTTKELISKYGLDDNT 180
T MEALKSPLMG+FEKRRAGKFF +VQ+Y E DP TH G DL ++TTK+LI+K+GL ++T
Sbjct: 121 TPMEALKSPLMGIFEKRRAGKFFSYVQEYDEKDPKTHDGMDLRRVTTKDLIAKFGLKEDT 180
Query: 181 IDFIGHAVALHKEDNYLTEPAIDTVKRMKLYAESVGRFQGGSPYIYPLYGLGELPQGFAR 240
IDFIGHAVALH DN+L +PA DTV RMKLYAES+ RFQGGSPYIYPLYGLGELPQ FAR
Sbjct: 181 IDFIGHAVALHCNDNHLHQPAYDTVMRMKLYAESLARFQGGSPYIYPLYGLGELPQAFAR 240
Query: 241 LSAVYGGTYMLNKPECKIEFNDEGKVCGVTSEGETAKCKKVVCDPSYIPDKVRKVGKVFR 300
LSAVYGGTYMLNKPECK+EF++EGKV GVTSEGETAKCKKVVCDPSY+ +KVRK+G+V R
Sbjct: 241 LSAVYGGTYMLNKPECKVEFDEEGKVSGVTSEGETAKCKKVVCDPSYLTNKVRKIGRVAR 300
Query: 301 AIAIMSHPIPNTADSHSVQIIIPQKQLGRKSDMYVFCCSYSHNVASKGKFIAFVSAQAES 360
AIAIMSHPIPNT DS SVQ+I+PQKQLGRKSDMYVFCCSYSHNVA KGKFIAFVS AE+
Sbjct: 301 AIAIMSHPIPNTNDSQSVQVILPQKQLGRKSDMYVFCCSYSHNVAPKGKFIAFVSTDAET 360
Query: 361 ENPAAELKPGIDLLGPVDELFIDTYDRFEPTNDPSSDNCFISTSYDATTHFESTVMDVLS 420
+NP EL+PGIDLLGPVDELF D YDR+EP N+P+ DNCFISTSYDATTHF++TV+DVL+
Sbjct: 361 DNPQTELQPGIDLLGPVDELFFDIYDRYEPVNEPTLDNCFISTSYDATTHFDTTVVDVLN 420
Query: 421 IYTKITGK 428
+Y ITGK
Sbjct: 421 MYKLITGK 428
>AT5G09550.1 | chr5:2963850-2966465 FORWARD LENGTH=446
Length = 445
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/429 (77%), Positives = 383/429 (89%)
Query: 1 MDVEYDVIVLGTGLKECILSGLLSVDRLKVLHMDRNDYYGGDSTSLNLNQLWKRFKGEGT 60
MD EYDVIVLGTGLKECILSGLLSVD LKVLHMDRNDYYGG+S+SLNL QLWKRF+G T
Sbjct: 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLTQLWKRFRGSDT 60
Query: 61 PPAQIGASRDYNVDMIPKFMMANGTLVRVLIHTGVTKYLSFKAVDGSYVFNKGKIHKVPS 120
P +GASR+YNVDMIPKF+MANG LV+ LIHT VTKYL+FKAVDGS+V+ KGKI+KVP+
Sbjct: 61 PEENLGASREYNVDMIPKFIMANGLLVQTLIHTDVTKYLNFKAVDGSFVYKKGKIYKVPA 120
Query: 121 TDMEALKSPLMGLFEKRRAGKFFLFVQDYKENDPSTHKGYDLNKMTTKELISKYGLDDNT 180
TD+EALKSPLMGLFEKRRA KFF++VQDY E DP +H+G DL+K+T +E+ISKYGL+D+T
Sbjct: 121 TDVEALKSPLMGLFEKRRARKFFIYVQDYDEKDPKSHEGLDLSKVTAREIISKYGLEDDT 180
Query: 181 IDFIGHAVALHKEDNYLTEPAIDTVKRMKLYAESVGRFQGGSPYIYPLYGLGELPQGFAR 240
IDFIGHA+ALH +D+YL +PAID VKR+KLYAES+ RFQGGSPYIYPLYGLGELPQ FAR
Sbjct: 181 IDFIGHALALHNDDDYLDQPAIDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFAR 240
Query: 241 LSAVYGGTYMLNKPECKIEFNDEGKVCGVTSEGETAKCKKVVCDPSYIPDKVRKVGKVFR 300
LSAVYGGTYMLNKPECK+EF+ GK GVTS GETAKCKKVVCDPSY+ +KV+KVGKV R
Sbjct: 241 LSAVYGGTYMLNKPECKVEFDGSGKAIGVTSAGETAKCKKVVCDPSYLSEKVKKVGKVTR 300
Query: 301 AIAIMSHPIPNTADSHSVQIIIPQKQLGRKSDMYVFCCSYSHNVASKGKFIAFVSAQAES 360
A+ IMSHPIP+T D+HSVQII+PQKQLGRKSDMY+FCCSY+HNVA KGK+IAFVSA+AE+
Sbjct: 301 AVCIMSHPIPDTNDAHSVQIILPQKQLGRKSDMYLFCCSYAHNVAPKGKYIAFVSAEAET 360
Query: 361 ENPAAELKPGIDLLGPVDELFIDTYDRFEPTNDPSSDNCFISTSYDATTHFESTVMDVLS 420
+NP ELKPGI+LLGP DE+F +YD + PTN DNCFIS +YDATTHFESTV+DVL
Sbjct: 361 DNPEEELKPGIELLGPTDEIFYHSYDTYVPTNIQEEDNCFISATYDATTHFESTVVDVLD 420
Query: 421 IYTKITGKT 429
+YTKITGKT
Sbjct: 421 MYTKITGKT 429
>AT3G06540.1 | chr3:2035201-2037662 REVERSE LENGTH=564
Length = 563
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 144/337 (42%), Gaps = 56/337 (16%)
Query: 5 YDVIVLGTGLKECILSGLLSVDRLKVLHMDRNDYYGGDSTSLNLNQLWKRFKGEGT---- 60
YD+IV+GTG+ E +L+ S VLH+D N +YG SL+L L
Sbjct: 15 YDLIVVGTGVSESVLAAAASSSGSSVLHLDPNPFYGSHFASLSLPDLTSFLHSNSVSPPP 74
Query: 61 --------------------------PPAQIGA---------SRDYNVDMI-PKFMMANG 84
+I + SR +NVD+ P+ +
Sbjct: 75 SPSSPPLPPSNNHDFISVDLVNRSLYSSVEISSFESEILEEHSRRFNVDLAGPRVVFCAD 134
Query: 85 TLVRVLIHTGVTKYLSFKAVDGSYVFNK-GKIHKVPSTDMEALKSPLMGLFEKRRAGKFF 143
+ +++ +G Y+ FK++D S+V + G++ VP + K + L EK + KFF
Sbjct: 135 ESINLMLKSGANNYVEFKSIDASFVGDSSGELRNVPDSRAAIFKDKSLTLLEKNQLMKFF 194
Query: 144 LFVQDY----KENDPSTHKGYDLNKMTTK--ELISKYGLDDNTIDFIGHAVALHKEDNYL 197
VQ + E D ST M + + +SK L I +A+A+ D
Sbjct: 195 KLVQSHLASSTEKDDSTTVKISEEDMESPFVDFLSKMRLPPKIKSIILYAIAMLDYDQDN 254
Query: 198 TEPAIDTVK------RMKLYAESVGRFQGG-SPYIYPLYGLGELPQGFARLSAVYGGTYM 250
TE +K R+ LY S+GRF IYP+YG GELPQ F R +AV G Y+
Sbjct: 255 TETCRHLLKTKEGIDRLALYITSMGRFSNALGALIYPIYGQGELPQAFCRRAAVKGCIYV 314
Query: 251 LNKPECKIEFNDE-GKVCGV-TSEGETAKCKKVVCDP 285
L P + + E G GV + G+ +K++ DP
Sbjct: 315 LRMPITALLLDKETGGYKGVRLASGQEIFSQKLILDP 351
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.137 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,879,068
Number of extensions: 443523
Number of successful extensions: 1009
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1007
Number of HSP's successfully gapped: 4
Length of query: 446
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 344
Effective length of database: 8,310,137
Effective search space: 2858687128
Effective search space used: 2858687128
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)