BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0238200 Os05g0238200|Os05g0238200
(361 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0238200 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-... 572 e-163
Os01g0234900 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-... 553 e-158
Os02g0293400 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-... 540 e-154
Os03g0356414 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-... 469 e-132
Os07g0659800 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-... 466 e-131
Os02g0128800 Seven in absentia protein family protein 444 e-125
Os06g0311300 Seven in absentia protein family protein 89 5e-18
Os01g0123700 87 2e-17
Os01g0121900 Seven in absentia protein family protein 78 9e-15
Os01g0761900 Seven in absentia protein family protein 78 1e-14
Os01g0125000 73 4e-13
Os05g0152600 69 4e-12
Os01g0123500 Seven in absentia protein family protein 69 4e-12
Os05g0152900 Seven in absentia protein family protein 69 7e-12
Os05g0152500 65 9e-11
>Os05g0238200 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia
homolog 5)
Length = 361
Score = 572 bits (1475), Expect = e-163, Method: Compositional matrix adjust.
Identities = 277/308 (89%), Positives = 277/308 (89%)
Query: 54 RAFPKANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVHELLECPVCTNSMFPPIHQ 113
RAFPKAN TSVHELLECPVCTNSMFPPIHQ
Sbjct: 54 RAFPKANVAGVGGGGAAGAPAAGGAVAGGGGPGGGPPATSVHELLECPVCTNSMFPPIHQ 113
Query: 114 CQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYS 173
CQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYS
Sbjct: 114 CQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYS 173
Query: 174 KIKHEAQCSFRPYNCPYAGSECAVAGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPRE 233
KIKHEAQCSFRPYNCPYAGSECAVAGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPRE
Sbjct: 174 KIKHEAQCSFRPYNCPYAGSECAVAGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPRE 233
Query: 234 VENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYTYSLEVGGNGR 293
VENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYTYSLEVGGNGR
Sbjct: 234 VENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYTYSLEVGGNGR 293
Query: 294 KMVWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQTNPDG 353
KMVWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQTNPDG
Sbjct: 294 KMVWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQTNPDG 353
Query: 354 ACIPNLCS 361
ACIPNLCS
Sbjct: 354 ACIPNLCS 361
>Os01g0234900 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia
homolog 5). Splice isoform 2
Length = 347
Score = 553 bits (1425), Expect = e-158, Method: Compositional matrix adjust.
Identities = 258/268 (96%), Positives = 263/268 (98%)
Query: 94 VHELLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAES 153
VHELLECPVCTNSM+PPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAES
Sbjct: 80 VHELLECPVCTNSMYPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAES 139
Query: 154 LELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAGSECAVAGDIPFLVAHLRDDHK 213
LELPCKYCSLGCPEIFPYYSKIKHEAQC FRPYNCPYAGSECAV GDIP+LVAHLRDDHK
Sbjct: 140 LELPCKYCSLGCPEIFPYYSKIKHEAQCMFRPYNCPYAGSECAVVGDIPYLVAHLRDDHK 199
Query: 214 VDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFM 273
VDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFM
Sbjct: 200 VDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFM 259
Query: 274 GDENEARNYTYSLEVGGNGRKMVWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDR 333
GDENEARNY+YSLEVG NGRKMVWEGTPRS+RDSHRKVRDSHDGLIIQRNMALFFSGGDR
Sbjct: 260 GDENEARNYSYSLEVGANGRKMVWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDR 319
Query: 334 KELKLRVTGRIWKEQTNPDGACIPNLCS 361
KELKLR+TGRIWKEQ PDGACIPNLCS
Sbjct: 320 KELKLRITGRIWKEQQTPDGACIPNLCS 347
>Os02g0293400 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia
homolog 5). Splice isoform 2
Length = 349
Score = 540 bits (1390), Expect = e-154, Method: Compositional matrix adjust.
Identities = 254/271 (93%), Positives = 264/271 (97%), Gaps = 1/271 (0%)
Query: 92 TSVHELLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVA 151
TSVHELLECPVCTNSM+PPIHQCQNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEKVA
Sbjct: 79 TSVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVA 138
Query: 152 ESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAGSECAVAGDIPFLVAHLRDD 211
ESLELPCKY SLGCPEIFPYYSK+KHE+QC+FRPYNCPYAGSEC+V GDIPFLVAHLRDD
Sbjct: 139 ESLELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGSECSVVGDIPFLVAHLRDD 198
Query: 212 HKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLR 271
HKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLG+APVYMAFLR
Sbjct: 199 HKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGVAPVYMAFLR 258
Query: 272 FMGDENEARNYTYSLEVGGNGRKMVWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGG 331
FMGDEN+ARNY+YSLEVG NGRKM+WEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGG
Sbjct: 259 FMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGG 318
Query: 332 DRKELKLRVTGRIWKEQTNPD-GACIPNLCS 361
+RKELKLRVTGRIWKEQ NPD GACIPNL S
Sbjct: 319 ERKELKLRVTGRIWKEQQNPDSGACIPNLFS 349
>Os03g0356414 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia
homolog 5). Splice isoform 2
Length = 301
Score = 469 bits (1208), Expect = e-132, Method: Compositional matrix adjust.
Identities = 215/257 (83%), Positives = 237/257 (92%)
Query: 92 TSVHELLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVA 151
+SV ELLECPVC ++M+PPIHQC NGHTLCS CK RVHNRCPTCR ELG+IRCLALEKVA
Sbjct: 45 SSVRELLECPVCLSAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVA 104
Query: 152 ESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAGSECAVAGDIPFLVAHLRDD 211
SLELPCKY + GC I+PYY K+KHE+QC +RPY+CPYAGSEC VAGDIP+LV HL+DD
Sbjct: 105 ASLELPCKYQNFGCVGIYPYYCKLKHESQCQYRPYSCPYAGSECTVAGDIPYLVNHLKDD 164
Query: 212 HKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLR 271
HKVDMH+GCTFNHRYVKSNP EVENATWMLTVF CFGQYFCLHFEAFQLGMAPVY+AFLR
Sbjct: 165 HKVDMHNGCTFNHRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLR 224
Query: 272 FMGDENEARNYTYSLEVGGNGRKMVWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGG 331
FMGD+ EA+NY+YSLEVGG GRKM+W+G PRSIRDSHRKVRDS+DGLIIQRNMALFFSGG
Sbjct: 225 FMGDDLEAKNYSYSLEVGGTGRKMIWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGG 284
Query: 332 DRKELKLRVTGRIWKEQ 348
+RKELKLRVTGRIWKEQ
Sbjct: 285 ERKELKLRVTGRIWKEQ 301
>Os07g0659800 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia
homolog 5). Splice isoform 2
Length = 302
Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust.
Identities = 213/256 (83%), Positives = 234/256 (91%)
Query: 93 SVHELLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAE 152
+V ELLECPVC N+M+PPIHQC NGHTLCS CK RVHNRCPTCR ELG+IRCLALEKVA
Sbjct: 47 NVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAA 106
Query: 153 SLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAGSECAVAGDIPFLVAHLRDDH 212
SLELPCKY + GC I+PYY K+KHE+QC +RPY CPYAGSEC VAGDI +LV+HL+DDH
Sbjct: 107 SLELPCKYQNFGCLGIYPYYCKLKHESQCQYRPYTCPYAGSECTVAGDIQYLVSHLKDDH 166
Query: 213 KVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF 272
KVDMH+G TFNHRYVKSNP EVENATWMLTVF CFGQYFCLHFEAFQLGMAPVY+AFLRF
Sbjct: 167 KVDMHNGSTFNHRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRF 226
Query: 273 MGDENEARNYTYSLEVGGNGRKMVWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGD 332
MGD+ EA+NY+YSLEVGG+GRKM W+G PRSIRDSHRKVRDS+DGLIIQRNMALFFSGGD
Sbjct: 227 MGDDAEAKNYSYSLEVGGSGRKMTWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGGD 286
Query: 333 RKELKLRVTGRIWKEQ 348
+KELKLRVTGRIWKEQ
Sbjct: 287 KKELKLRVTGRIWKEQ 302
>Os02g0128800 Seven in absentia protein family protein
Length = 308
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 206/257 (80%), Positives = 230/257 (89%)
Query: 92 TSVHELLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVA 151
T +++LLECPVCTNSM PPI QC NGHT+CS CK RV N CPTCRQELG+IRCLALEKVA
Sbjct: 52 TGLNDLLECPVCTNSMRPPILQCPNGHTICSNCKHRVENHCPTCRQELGNIRCLALEKVA 111
Query: 152 ESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAGSECAVAGDIPFLVAHLRDD 211
ESL+LPCKY SLGC EI PY +K+KHE C FRPY+CPYAGSEC +AGD+P LV+HL +D
Sbjct: 112 ESLQLPCKYQSLGCAEIHPYQNKLKHEELCRFRPYSCPYAGSECLIAGDVPMLVSHLIND 171
Query: 212 HKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLR 271
HKVD+H GCTFNHRYVKSNP EVENATWMLTVF CFGQ+FCLHFEAF LGMAPVYMAFLR
Sbjct: 172 HKVDLHEGCTFNHRYVKSNPYEVENATWMLTVFKCFGQHFCLHFEAFLLGMAPVYMAFLR 231
Query: 272 FMGDENEARNYTYSLEVGGNGRKMVWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGG 331
FMG+++EARN+ YSLEVGGNGRK+ W+G PRSIRDSH+KVRDS DGLII RNMALFFSGG
Sbjct: 232 FMGEDSEARNFCYSLEVGGNGRKLTWQGIPRSIRDSHKKVRDSFDGLIIHRNMALFFSGG 291
Query: 332 DRKELKLRVTGRIWKEQ 348
+R+ELKLRVTGRIWKEQ
Sbjct: 292 NRQELKLRVTGRIWKEQ 308
>Os06g0311300 Seven in absentia protein family protein
Length = 321
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Query: 96 ELLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLE 155
++L+C +C S+ PP++QCQNGH C +C +++ N+C C ++ R +ALEK+ ES++
Sbjct: 83 DVLDCSICFESLRPPLYQCQNGHVACFSCWSKLSNKCHICSRDAKFARNIALEKIVESIK 142
Query: 156 LPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAGSECAVAGDIPFLVAHLRDDHKVD 215
C Y GC + Y + HE C F P CP S C G H H D
Sbjct: 143 SSCSYAKWGCCKFINYAQRDAHEEACLFAPSVCPI--SNCGYRGFTGRWSGHFLTSHSSD 200
Query: 216 MHSGCTFNHRYVKSNPREV 234
+ R++ P EV
Sbjct: 201 V-------MRFIYGQPFEV 212
>Os01g0123700
Length = 292
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 13/129 (10%)
Query: 96 ELLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLE 155
+ LECP+C ++ C+NGH C +C A+++ CP C + +G+IRC LEKV ++
Sbjct: 44 DALECPICFVPFEDRVYMCKNGHAACGSCYAKMNTMCPCCIEPIGNIRCRPLEKVLAAMS 103
Query: 156 LPCKYCS---------LGCPEIFPYYSKIKHEAQCSFRPYNCPYAGSECAVAGDIPFLVA 206
PC++ + GC EI Y + HEA C P CP+ G C G + L +
Sbjct: 104 APCRFSTSAYMRLIRASGCTEIVAYTERRNHEASCPHAPCVCPFDG--CNYQGHL--LYS 159
Query: 207 HLRDDHKVD 215
H++D+H D
Sbjct: 160 HIQDEHATD 168
>Os01g0121900 Seven in absentia protein family protein
Length = 651
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 96 ELLECPVCTNSMFPPIHQC-QNGHTLCSTCKARVHNRCPTCRQ-ELGDIRCLALEKVAES 153
E+LEC VC + PP++QC + GH CSTC A + C CR E RC A+E +
Sbjct: 49 EVLECDVCFGPLTPPLYQCMRRGHITCSTCVAEMGQECQWCRAPEATTTRCRAMEHFLAA 108
Query: 154 LELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAGSECAVAGDIPFLVAHLRDDH 212
L +PC + GC + PY + HEA C+ P CP G + + LV HL H
Sbjct: 109 LAVPCSFNHKGCAAMVPYGEREAHEAACAHSPCYCPIRGCSSSPYSGV-SLVEHLERKH 166
>Os01g0761900 Seven in absentia protein family protein
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 96 ELLECPVCTNSMFPPIHQCQNGHTLCSTCKARV--HNRCPTCRQELGDIRCLALEKVAES 153
E+L+C VC + + PP+ QC GH +CS+C ++ NRC C + RC A+E++ S
Sbjct: 20 EVLDCTVCCHPLKPPVLQCGVGHVICSSCHGKLPDKNRCHVCAMDTAYNRCFAVEQILRS 79
Query: 154 LELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAGSECAVAGDIPFLVAHLRDDH 212
+ +PC+ GC Y+ HE C P CP G C AG L AH H
Sbjct: 80 ILVPCRNAGYGCDAKTAYHDSDSHEDGCPHAPCFCPEPG--CGFAGATSSLPAHFTGGH 136
>Os01g0125000
Length = 399
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 96 ELLECPVCTNSMFPPIHQCQNGHTLCSTCKARV--HNRCPTCR-QELGDIRCLALEKVAE 152
E+L CPVC + PP+ QC GH +CS C+ + +CP+ +RC+A+E+V
Sbjct: 35 EVLHCPVCFQILRPPVFQCDLGHLVCSPCRDNLPAGGKCPSPSCFGTPSVRCVAMERVVN 94
Query: 153 SLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAG 192
S+E+ C Y GCP+ Y + +HE C P CP G
Sbjct: 95 SVEVACAYAEHGCPDKIAYANITEHEKTCPHAPCFCPEPG 134
>Os05g0152600
Length = 342
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 96 ELLECPVCTNSMFPPIHQCQNGHTLCSTCKARV--HNRCPTCRQELGD---IRCLALEKV 150
+ LEC VC + PPI QC+ GH +CS C+ ++ RC CR + RC ALE++
Sbjct: 71 DALECGVCFLPLRPPIFQCEVGHVVCSPCRDKLAPAGRCHVCRVAVAGGEYRRCYALERL 130
Query: 151 AESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAGSECAVAGDIPFLVAHLRD 210
+++ + C + + GC Y++ H C P +CP G C G L
Sbjct: 131 VDAIRVACPHAAHGCGATPAYHALDAHRRACPHAPCHCP--GERCGFVGSTVAL-----Q 183
Query: 211 DHKVDMHS-GCTFNHRYVKSNPREVENATWMLTVFH 245
DH HS CT N R ++ + + L V H
Sbjct: 184 DHIAATHSWPCTTNVRAGETVSVHLRDGLAFLRVHH 219
>Os01g0123500 Seven in absentia protein family protein
Length = 282
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 132 CPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYA 191
CP+C + +GDIRC LEKV ++ PCK+ + GC E + ++ HEA C+ P CP+
Sbjct: 77 CPSCNEPIGDIRCRPLEKVLAAMSAPCKFRASGCMETVGFTERLSHEASCTHAPCGCPFD 136
Query: 192 GSECAVAGDIPFLVAHLRDDHKVD 215
G C G + L H+ D+H D
Sbjct: 137 G--CTYLGLL--LYNHILDEHATD 156
>Os05g0152900 Seven in absentia protein family protein
Length = 387
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 96 ELLECPVCTNSMFPPIHQCQNGHTLCSTCKARV--HNRCPTCRQELGD---IRCLALEKV 150
+ LEC VC + PPI QC+ GH +C+ C+ ++ RC CR + RC ALE++
Sbjct: 132 DALECGVCCLPLRPPIFQCEVGHVVCAPCRDKLAPAGRCHVCRAAVAGGEYRRCHALERL 191
Query: 151 AESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAGSECAVAGDIPFLVAHLRD 210
+++ + C + + GC Y++ H C P CP G C AG L+ H
Sbjct: 192 VDAIRVACPHAAHGCGATPAYHALDAHRRACPHAPCRCP--GESCGFAGSTAALLDHFAA 249
Query: 211 DH 212
H
Sbjct: 250 AH 251
>Os05g0152500
Length = 384
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 96 ELLECPVCTNSMFPPIHQCQNGHTLCSTCKARV--HNRCPTCRQELGD---IRCLALEKV 150
+ LEC VC + PPI QC+ GH +C+ C+ + RC CR + RC ALE++
Sbjct: 129 DALECGVCFLLLRPPIFQCEVGHVVCAPCRDTLAPAGRCYVCRVAVAGGEYRRCYALERL 188
Query: 151 AESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAGSECAVAGDIPFLVAHLRD 210
+++ + C + + GC Y+ H C P +CP G C G L+ H
Sbjct: 189 VDAIRVACPHAAHGCAARPAYHDVEAHRLACPHGPCHCP--GERCGFVGSTAALLDHFAA 246
Query: 211 DHK 213
H
Sbjct: 247 THN 249
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.138 0.462
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,115,166
Number of extensions: 457705
Number of successful extensions: 1403
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 1394
Number of HSP's successfully gapped: 17
Length of query: 361
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 259
Effective length of database: 11,709,973
Effective search space: 3032883007
Effective search space used: 3032883007
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)