Os05g0238200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5).
FiT-DB / Search/ Help/ Sample detail
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Os05g0238200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.58 | 0.208 | 11.9 | -0.631 | 0.744 | 0.398 | 0.672 | -1.25 | -0.134 | 4.03 | 19 | 4403 | -- | -- |
| 20.98 | 0.213 | 11.8 | -0.345 | 0.72 | 0.412 | 0.675 | -- | -0.0857 | 3.98 | 15.56 | 10717 | -- | -- |
| 20.81 | 0.212 | 11.9 | -0.627 | 0.757 | 0.398 | -- | -1.2 | -0.136 | 4.09 | 18.67 | 4587 | -- | -- |
| 21.96 | 0.218 | 11.9 | -0.371 | 0.744 | 0.481 | -- | -- | -0.108 | 4.12 | 13.31 | 8566 | -- | -- |
| 50.09 | 0.33 | 11.9 | -0.53 | -- | 0.556 | -- | -0.865 | -0.118 | -- | 15.83 | 2631 | -- | -- |
| 24.54 | 0.232 | 11.8 | -0.107 | 0.758 | -- | 0.658 | -- | 0.0433 | 3.99 | -- | -- | -- | -- |
| 25.78 | 0.238 | 11.8 | -0.115 | 0.763 | -- | -- | -- | 0.0396 | 4.07 | -- | -- | -- | -- |
| 50.52 | 0.331 | 11.8 | -0.315 | -- | 0.58 | -- | -- | -0.0602 | -- | 13.26 | 2622 | -- | -- |
| 24.18 | 0.229 | 11.8 | -- | 0.743 | 0.281 | -- | -- | 0.00738 | 4.1 | 13.96 | 5629 | -- | -- |
| 57.48 | 0.354 | 11.8 | -0.0841 | -- | -- | -- | -- | 0.0599 | -- | -- | -- | -- | -- |
| 26.12 | 0.239 | 11.8 | -- | 0.761 | -- | -- | -- | 0.0524 | 4.07 | -- | -- | -- | -- |
| 52.22 | 0.337 | 11.8 | -- | -- | 0.531 | -- | -- | -0.0073 | -- | 12.03 | 1184 | -- | -- |
| 57.66 | 0.354 | 11.8 | -- | -- | -- | -- | -- | 0.0693 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.13 | temperature | 15 | 270 | > th | dose dependent | sin | 10 | NA |
| 3 | 18.31 | temperature | 30 | 270 | < th | dose dependent | sin | 11 | NA |
| 17 | 18.70 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 24 | 18.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 25 | 18.80 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 26 | 18.80 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 30 | 18.85 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 32 | 18.86 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 16 |
| 34 | 18.87 | temperature | 25 | 270 | < th | dose dependent | rect. | 20 | 12 |
| 35 | 18.87 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 14 |
| 38 | 18.88 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 54 | 18.96 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 17 |
| 60 | 18.97 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 11 |
| 78 | 19.03 | temperature | 20 | 90 | > th | dose independent | rect. | 6 | 23 |
| 81 | 19.03 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 125 | 19.17 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 3 |
| 128 | 19.20 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 6 |
| 147 | 19.24 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 158 | 19.27 | temperature | 20 | 30 | > th | dose independent | sin | 8 | NA |
| 159 | 19.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 179 | 19.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 7 |
| 186 | 19.30 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 23 |
| 205 | 19.33 | temperature | 20 | 90 | < th | dose independent | sin | 9 | NA |
| 253 | 19.39 | temperature | 10 | 720 | > th | dose dependent | sin | 13 | NA |
| 263 | 19.41 | temperature | 20 | 10 | < th | dose independent | sin | 9 | NA |
| 296 | 19.47 | temperature | 20 | 90 | < th | dose independent | rect. | 22 | 13 |
| 322 | 19.52 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 2 |
| 323 | 19.52 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 4 |
| 351 | 19.56 | temperature | 20 | 90 | < th | dose independent | rect. | 17 | 18 |
| 365 | 19.58 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 16 |
| 366 | 19.58 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 370 | 19.59 | temperature | 20 | 90 | < th | dose independent | rect. | 15 | 20 |
| 371 | 19.59 | temperature | 20 | 4320 | > th | dose dependent | sin | 15 | NA |
| 374 | 19.59 | temperature | 15 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 390 | 19.59 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 18 |
| 395 | 19.59 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 21 |
| 416 | 19.60 | temperature | 20 | 4320 | > th | dose dependent | rect. | 11 | 16 |
| 425 | 19.60 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 21 |
| 431 | 19.61 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 18 |
| 442 | 19.61 | temperature | 15 | 4320 | > th | dose dependent | rect. | 19 | 10 |
| 474 | 19.62 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 18 |
| 481 | 19.62 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 508 | 19.63 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 536 | 19.63 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 22 |
| 553 | 19.63 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 557 | 19.64 | temperature | 20 | 90 | < th | dose independent | rect. | 13 | 22 |
| 561 | 19.64 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 614 | 19.65 | temperature | 25 | 4320 | < th | dose independent | rect. | 13 | 16 |
| 669 | 19.66 | temperature | 20 | 4320 | > th | dose independent | sin | 9 | NA |
| 670 | 19.66 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 12 |
| 731 | 19.67 | temperature | 20 | 4320 | < th | dose independent | sin | 9 | NA |
| 732 | 19.67 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 736 | 19.67 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 12 |
| 737 | 19.67 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 13 |
| 739 | 19.67 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 749 | 19.67 | temperature | 15 | 4320 | > th | dose dependent | sin | 9 | NA |
| 755 | 19.67 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 5 |
| 790 | 19.67 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 833 | 19.68 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 14 |
| 896 | 19.69 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 12 |
| 943 | 19.70 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 21 |
| 948 | 19.70 | temperature | 20 | 4320 | > th | dose dependent | sin | 3 | NA |
| 958 | 19.70 | temperature | 15 | 4320 | > th | dose dependent | rect. | 2 | 6 |