Os02g0128800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Seven in absentia protein family protein.
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Os02g0128800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Seven in absentia protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.88 | 0.322 | 9.22 | -0.807 | 0.507 | -1.18 | 0.182 | 0.619 | -0.119 | 21.9 | 30.2 | 9 | -- | -- |
| 47.28 | 0.323 | 9.21 | -0.699 | 0.512 | -1.19 | 0.345 | -- | -0.0943 | 22.1 | 30.17 | 6 | -- | -- |
| 46.87 | 0.319 | 9.22 | -0.828 | 0.501 | -1.16 | -- | 0.743 | -0.119 | 21.7 | 30.24 | 5 | -- | -- |
| 47.6 | 0.321 | 9.21 | -0.707 | 0.509 | -1.16 | -- | -- | -0.0901 | 21.8 | 30.08 | 5 | -- | -- |
| 56.28 | 0.349 | 9.2 | -0.779 | -- | -1.12 | -- | 0.265 | -0.132 | -- | 27.04 | 269 | -- | -- |
| 65.5 | 0.379 | 9.15 | -0.437 | 0.501 | -- | -0.302 | -- | 0.134 | 18.6 | -- | -- | -- | -- |
| 65.7 | 0.38 | 9.15 | -0.434 | 0.5 | -- | -- | -- | 0.132 | 18.7 | -- | -- | -- | -- |
| 56.37 | 0.35 | 9.2 | -0.729 | -- | -1.13 | -- | -- | -0.122 | -- | 26.96 | 274 | -- | -- |
| 59.47 | 0.361 | 9.18 | -- | 0.479 | -0.864 | -- | -- | 0.0374 | 21 | 30.08 | 5 | -- | -- |
| 78.75 | 0.415 | 9.14 | -0.445 | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
| 70.66 | 0.393 | 9.14 | -- | 0.505 | -- | -- | -- | 0.181 | 18.7 | -- | -- | -- | -- |
| 69.17 | 0.387 | 9.17 | -- | -- | -0.869 | -- | -- | 0.0109 | -- | 27.3 | 264 | -- | -- |
| 83.98 | 0.428 | 9.13 | -- | -- | -- | -- | -- | 0.172 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.98 | temperature | 30 | 10 | < th | dose dependent | sin | 3 | NA |
| 3 | 43.16 | temperature | 30 | 30 | < th | dose dependent | sin | 5 | NA |
| 13 | 44.21 | temperature | 15 | 30 | > th | dose dependent | sin | 4 | NA |
| 32 | 44.93 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 36 | 45.20 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 39 | 45.26 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 40 | 45.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 43 | 45.39 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 76 | 46.14 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 77 | 46.15 | temperature | 15 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 98 | 46.58 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 110 | 46.70 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 118 | 46.81 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 119 | 46.81 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 129 | 46.91 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 132 | 46.95 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 138 | 47.00 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 141 | 47.04 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 147 | 47.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 148 | 47.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 152 | 47.11 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 160 | 47.18 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 17 |
| 171 | 47.28 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 174 | 47.30 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 177 | 47.32 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 200 | 47.49 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 201 | 47.49 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 230 | 47.72 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 22 |
| 233 | 47.73 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 243 | 47.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 247 | 47.82 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 292 | 48.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 340 | 48.35 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 431 | 48.71 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 458 | 48.89 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 9 |
| 579 | 49.30 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 793 | 50.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 837 | 50.14 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 16 |
| 929 | 50.42 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |