BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0202500 Os05g0202500|AK068507
(196 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0202500 Conserved hypothetical protein 409 e-115
Os07g0212400 Conserved hypothetical protein 316 7e-87
Os08g0367300 316 8e-87
Os02g0129000 Conserved hypothetical protein 313 4e-86
Os10g0343500 Conserved hypothetical protein 254 3e-68
Os12g0544700 183 8e-47
Os01g0768400 Conserved hypothetical protein 161 3e-40
Os01g0215800 94 8e-20
Os05g0286600 91 4e-19
Os02g0225400 89 1e-18
Os01g0381000 88 3e-18
Os04g0610000 Conserved hypothetical protein 87 8e-18
Os10g0195100 En/Spm-like transposon proteins family protein 84 8e-17
Os12g0417000 Putative plant transposon protein family protein 83 1e-16
Os10g0409366 69 2e-12
>Os05g0202500 Conserved hypothetical protein
Length = 196
Score = 409 bits (1051), Expect = e-115, Method: Compositional matrix adjust.
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MSFFVGIQMRFLYAPRMEEFILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLP 60
MSFFVGIQMRFLYAPRMEEFILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLP
Sbjct: 1 MSFFVGIQMRFLYAPRMEEFILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLP 60
Query: 61 DQWIALINHWMSEKSKKISKQNKENCRKKKALHTAGTNSFARTREEMRQKDPAKNPHRAI 120
DQWIALINHWMSEKSKKISKQNKENCRKKKALHTAGTNSFARTREEMRQKDPAKNPHRAI
Sbjct: 61 DQWIALINHWMSEKSKKISKQNKENCRKKKALHTAGTNSFARTREEMRQKDPAKNPHRAI 120
Query: 121 VYIQTHKRKTGKNLNGHVDNLKKLVVEQPALADTSEGRTAWKGDALNQILGDDKPGHVHG 180
VYIQTHKRKTGKNLNGHVDNLKKLVVEQPALADTSEGRTAWKGDALNQILGDDKPGHVHG
Sbjct: 121 VYIQTHKRKTGKNLNGHVDNLKKLVVEQPALADTSEGRTAWKGDALNQILGDDKPGHVHG 180
Query: 181 LGLVPKPKQVLDVPNS 196
LGLVPKPKQVLDVPNS
Sbjct: 181 LGLVPKPKQVLDVPNS 196
>Os07g0212400 Conserved hypothetical protein
Length = 685
Score = 316 bits (809), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 155/191 (81%), Positives = 176/191 (92%), Gaps = 1/191 (0%)
Query: 7 IQMRFLYAPRMEEFILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLPDQWIAL 66
++MRFLYAPRMEEFILK I ERWR +KAKLK+ YFDVN++KEANCNNVP VL DQWIAL
Sbjct: 176 VKMRFLYAPRMEEFILKKIGERWRQYKAKLKDLYFDVNETKEANCNNVPEGVLSDQWIAL 235
Query: 67 INHWMSEKSKKISKQNKENCRKKKALHTAGTNSFARTREEMRQKDPA-KNPHRAIVYIQT 125
+NHWM+EKSK+IS+QNK+NC+KKKA+HTAGT SFARTREEMRQKDPA KNPHRA+VY+ T
Sbjct: 236 VNHWMNEKSKRISEQNKKNCQKKKAIHTAGTKSFARTREEMRQKDPAKKNPHRAVVYVHT 295
Query: 126 HKRKTGKNLNGHVDNLKKLVVEQPALADTSEGRTAWKGDALNQILGDDKPGHVHGLGLVP 185
HKRK+ KN+NGHVDNLK+L+ EQPALAD S+G+TAWKGDALNQILGDDKPG VHGLGLVP
Sbjct: 296 HKRKSDKNINGHVDNLKRLIAEQPALADASKGKTAWKGDALNQILGDDKPGRVHGLGLVP 355
Query: 186 KPKQVLDVPNS 196
KPKQVLDVP S
Sbjct: 356 KPKQVLDVPTS 366
>Os08g0367300
Length = 775
Score = 316 bits (809), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 155/191 (81%), Positives = 176/191 (92%), Gaps = 1/191 (0%)
Query: 7 IQMRFLYAPRMEEFILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLPDQWIAL 66
++MRFLYAPRMEEFILK I ERWR +KAKLK+ YFDVN++KEANCNNVP VL DQWIAL
Sbjct: 188 VKMRFLYAPRMEEFILKKIGERWRQYKAKLKDLYFDVNETKEANCNNVPEGVLSDQWIAL 247
Query: 67 INHWMSEKSKKISKQNKENCRKKKALHTAGTNSFARTREEMRQKDPA-KNPHRAIVYIQT 125
+NHWM+EKSK+IS+QNK+NC+KKKA+HTAGT SFARTREEMRQKDPA KNPHRA+VY+ T
Sbjct: 248 VNHWMNEKSKRISEQNKKNCQKKKAIHTAGTKSFARTREEMRQKDPAKKNPHRAVVYVHT 307
Query: 126 HKRKTGKNLNGHVDNLKKLVVEQPALADTSEGRTAWKGDALNQILGDDKPGHVHGLGLVP 185
HKRK+ KN+NGHVDNLK+L+ EQPALAD S+G+TAWKGDALNQILGDDKPG VHGLGLVP
Sbjct: 308 HKRKSDKNINGHVDNLKRLIAEQPALADASKGKTAWKGDALNQILGDDKPGRVHGLGLVP 367
Query: 186 KPKQVLDVPNS 196
KPKQVLDVP S
Sbjct: 368 KPKQVLDVPTS 378
>Os02g0129000 Conserved hypothetical protein
Length = 750
Score = 313 bits (803), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 154/191 (80%), Positives = 175/191 (91%), Gaps = 1/191 (0%)
Query: 7 IQMRFLYAPRMEEFILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLPDQWIAL 66
++MRFLYAPRMEEFILK I ERWR +KAKLK+ YFDVN++KEANCNNVP VL DQWIAL
Sbjct: 173 VKMRFLYAPRMEEFILKKIGERWRQYKAKLKDLYFDVNETKEANCNNVPEGVLSDQWIAL 232
Query: 67 INHWMSEKSKKISKQNKENCRKKKALHTAGTNSFARTREEMRQKDPAKN-PHRAIVYIQT 125
+NHWM+EKSK+IS+QNK+NC+KKKA+HTAGT SFARTREEMRQKDPAK PHRA+VY+ T
Sbjct: 233 VNHWMNEKSKRISEQNKKNCQKKKAIHTAGTKSFARTREEMRQKDPAKKYPHRAVVYVHT 292
Query: 126 HKRKTGKNLNGHVDNLKKLVVEQPALADTSEGRTAWKGDALNQILGDDKPGHVHGLGLVP 185
HKRK+ KN+NGHVDNLK+L+ EQPALAD S+G+TAWKGDALNQILGDDKPG VHGLGLVP
Sbjct: 293 HKRKSDKNINGHVDNLKRLIAEQPALADASKGKTAWKGDALNQILGDDKPGRVHGLGLVP 352
Query: 186 KPKQVLDVPNS 196
KPKQVLDVP S
Sbjct: 353 KPKQVLDVPTS 363
>Os10g0343500 Conserved hypothetical protein
Length = 643
Score = 254 bits (648), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/190 (66%), Positives = 141/190 (74%), Gaps = 32/190 (16%)
Query: 8 QMRFLYAPRMEEFILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLPDQWIALI 67
QMRFLYAPRMEEFILK I ERW +KAKLK+ YFDVN++KEANCNNV VL DQWIAL+
Sbjct: 143 QMRFLYAPRMEEFILKKIVERWWQYKAKLKDLYFDVNETKEANCNNVLEGVLSDQWIALV 202
Query: 68 NHWMSEKSKKISKQNKENCRKKKALHTAGTNSFARTREEMRQKDPAKN-PHRAIVYIQTH 126
NHWM+EKSK RQKDPAK PHRA+VY+ TH
Sbjct: 203 NHWMNEKSK-------------------------------RQKDPAKKKPHRAVVYVHTH 231
Query: 127 KRKTGKNLNGHVDNLKKLVVEQPALADTSEGRTAWKGDALNQILGDDKPGHVHGLGLVPK 186
KRK+ KN+NGHVDNLK+L+ EQ ALAD S+G+TAWKGDALNQILGDDKPG VHGLGLVPK
Sbjct: 232 KRKSDKNINGHVDNLKRLIAEQLALADASKGKTAWKGDALNQILGDDKPGRVHGLGLVPK 291
Query: 187 PKQVLDVPNS 196
PKQVLDVP S
Sbjct: 292 PKQVLDVPTS 301
>Os12g0544700
Length = 469
Score = 183 bits (464), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 127/191 (66%), Gaps = 2/191 (1%)
Query: 1 MSFFVGIQMRFLYAPRMEEFILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLP 60
++ +Q FLY P ++ILK+I WR +KA LK+KYF+ K + A P DV
Sbjct: 130 LTILQFVQTNFLYPPSCVQWILKSIGRDWRRYKAALKDKYFNPKKKRSALYKLCPDDVEK 189
Query: 61 DQWIALINHWMSEKSKKISKQNKENCRKKKALHTAGTNSFARTREEMRQKDP-AKNPHRA 119
DQWI LI +W S+K K +S +NK + + H+AGT S+AR E++RQ DP K PHRA
Sbjct: 190 DQWIPLIKYWKSKKGKALSAKNKRSRSMLQNPHSAGTKSYARWSEDLRQDDPNKKQPHRA 249
Query: 120 IVYIQTHKRKTGKNLNGHVDNLKKLVVEQPALADTSEGRTAWKGDALNQILGDDKPGHVH 179
+VY+ THK+K K+ N HV L+ L+ EQP LA +GR AW+GDALN++LG +KPG VH
Sbjct: 250 MVYLATHKKKD-KDKNQHVVTLENLIDEQPELAQNDQGRVAWEGDALNKVLGKEKPGQVH 308
Query: 180 GLGLVPKPKQV 190
G+GL+P PKQV
Sbjct: 309 GMGLLPVPKQV 319
>Os01g0768400 Conserved hypothetical protein
Length = 639
Score = 161 bits (408), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 116/191 (60%), Gaps = 19/191 (9%)
Query: 1 MSFFVGIQMRFLYAPRMEEFILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLP 60
++ +Q +FLY P ++ILK+I WR +KA LK+KYF+ K + A P DV
Sbjct: 139 LTILQFVQTKFLYPPSCVQWILKSIGRDWRRYKAALKDKYFNPKKKRSALYKLCPDDVEK 198
Query: 61 DQWIALINHWMSEKSKKISKQNKENCRKKKALHTAGTNSFARTREEMRQKDP-AKNPHRA 119
DQWI LI +W S+K K +S +NK + + H+AGT S+AR E++RQ DP K PHRA
Sbjct: 199 DQWIPLIKYWKSKKGKALSAKNKRSRSMLQNPHSAGTKSYARWSEDLRQDDPNKKQPHRA 258
Query: 120 IVYIQTHKRKTGKNLNGHVDNLKKLVVEQPALADTSEGRTAWKGDALNQILGDDKPGHVH 179
+V L+ L+ EQP LA +GR AW+GDALN++LG +KPG VH
Sbjct: 259 MV------------------TLENLIDEQPELAQNDQGRVAWEGDALNKVLGKEKPGQVH 300
Query: 180 GLGLVPKPKQV 190
G+GL+P PKQV
Sbjct: 301 GMGLLPVPKQV 311
>Os01g0215800
Length = 286
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 4/189 (2%)
Query: 7 IQMRFLYAPRMEEFILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLPDQWIAL 66
++ +F R ++++L + +WR +K+ LK+KY+ N E VP V QW L
Sbjct: 99 LKRKFAIHGRAKDWLLHQLDGKWRQYKSNLKKKYYKANLPMERVLQTVPQTVNESQWPTL 158
Query: 67 INHWMSEKSKKISKQNKENCRKKKALHTAGTNSFARTREEMRQKDPAKNPHRAIVYIQTH 126
+++W SE SKKIS QN+EN + K HT G SFAR R+E+ + RA + + H
Sbjct: 159 VSYWYSEDSKKISDQNQENAQNIKHPHTLGRKSFARKRKELEHDGVEVD--RATFFDECH 216
Query: 127 KRKTGKNLNGHVDNLKKLVVEQPA--LADTSEGRTAWKGDALNQILGDDKPGHVHGLGLV 184
K K G+ +N + V + A D E A A+ ++ G D G V G+G
Sbjct: 217 KTKDGRYVNDATQDKMNEVYMKLAEKRVDGQELSEADFEQAMLEVFGKDHNGRVRGMGPT 276
Query: 185 PKPKQVLDV 193
P D
Sbjct: 277 ITPTDYYDT 285
>Os05g0286600
Length = 353
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 4/183 (2%)
Query: 7 IQMRFLYAPRMEEFILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLPDQWIAL 66
+Q +F R ++++L + +WR +K+ LK+KY+ N E VP V QW L
Sbjct: 147 VQRKFAIDGRAKDWLLHQLDGKWRQYKSNLKKKYYKANLPMERVLQMVPQTVNESQWPTL 206
Query: 67 INHWMSEKSKKISKQNKENCRKKKALHTAGTNSFARTREEMRQKDPAKNPHRAIVYIQTH 126
+++W SE SKKIS QN+EN + K H G SFAR R+E+ + RA + + H
Sbjct: 207 VSYWYSEDSKKISDQNQENAQNIKHPHKLGRKSFARKRKELEHDRVEVD--RATFFDECH 264
Query: 127 KRKTGKNLNGHVDNLKKLVVEQPA--LADTSEGRTAWKGDALNQILGDDKPGHVHGLGLV 184
K K G+ +N + V + A D E A A+ ++ G D G V G+G
Sbjct: 265 KTKDGRYVNDATQDKMNEVYMKLAEKRVDGQELTEADFEQAMLEVFGKDHSGRVRGMGPT 324
Query: 185 PKP 187
P
Sbjct: 325 ITP 327
>Os02g0225400
Length = 397
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 4/178 (2%)
Query: 7 IQMRFLYAPRMEEFILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLPDQWIAL 66
++ +F R +IL + +WR +K+KLK+ Y+ N E VP V QW L
Sbjct: 111 VERKFAIDGRANNWILHQLDGKWRQYKSKLKKGYYKPNLPMERVLQTVPKTVAESQWATL 170
Query: 67 INHWMSEKSKKISKQNKENCRKKKALHTAGTNSFARTREEMRQKDPAKNPHRAIVYIQTH 126
+++W SE SKKIS +NKEN + K H G SFAR R+E+ + RA + + H
Sbjct: 171 VSYWYSEDSKKISDKNKENAQNIKHPHILGRKSFARKRKELEVNGVEVD--RATFFDECH 228
Query: 127 KRKTGKNLNGHVDNLKKLVVEQPA--LADTSEGRTAWKGDALNQILGDDKPGHVHGLG 182
K K G+ +N + V + A D E A A+ ++ G D G V G+G
Sbjct: 229 KTKNGRYVNDATEEKMNEVYMKLAEKRVDGQELSEADFEQAMLEVFGKDHRGRVRGMG 286
>Os01g0381000
Length = 436
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 92/182 (50%), Gaps = 11/182 (6%)
Query: 7 IQMRFLYAPRMEEFILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLPDQWIAL 66
++ +F R + L + +WR +K+KLK+ Y+ N S E +P V QW L
Sbjct: 159 VERKFAIDGRANNWNLHQLDGKWRQYKSKLKKGYYKPNLSMERVLQTMPKTVAESQWATL 218
Query: 67 INHWMSEKSKKISKQNKENCRKKKALHTAGTNSFARTREEMRQKDPAKNPHRAIVYIQTH 126
+++W SE SKKIS +NKEN + K HT G SFAR R+E+ + RA + + H
Sbjct: 219 VSYWYSEDSKKISDKNKENAQNIKHPHTLGRKSFARKRKELEVNGVEVD--RATFFDECH 276
Query: 127 KRKTGKNLNGHVDN-LKKLVVEQPALADTSEGRTAWKGDALNQILGDDKPGHVHGLGLVP 185
K K G+ +N + +K++ ++ + AD + + ++ G D G V G+G
Sbjct: 277 KTKDGRYVNDATEEKMKRVDGQELSEADFEQN--------ILEVFGKDHSGRVRGMGPTI 328
Query: 186 KP 187
P
Sbjct: 329 TP 330
>Os04g0610000 Conserved hypothetical protein
Length = 767
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 84/144 (58%), Gaps = 3/144 (2%)
Query: 7 IQMRFLYAPRMEEFILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLPDQWIAL 66
++++F AP E +I+K I +W+ KA LK+K++D +++ E + VL +QW L
Sbjct: 487 VKLKFDIAPAAEFWIMKCIGRKWKSWKALLKQKHYDTHETVEECLADQNPRVLKEQWQYL 546
Query: 67 INHWMSEKSKKISKQNKENCRKK-KALHTAGTNSFARTREEMRQKDP-AKNPHRAIVYIQ 124
+ +W +EK+K +S +NK CR A HTAGT SFAR EE +QK P + P A +++
Sbjct: 547 VAYWGTEKAKAVSSRNKA-CRANVTATHTAGTKSFARIIEEEKQKRPNNEEPTAADLFLL 605
Query: 125 THKRKTGKNLNGHVDNLKKLVVEQ 148
TH + GK + ++ V EQ
Sbjct: 606 THTHRNGKPMKKEKADIIARVREQ 629
>Os10g0195100 En/Spm-like transposon proteins family protein
Length = 1299
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 91/175 (52%), Gaps = 9/175 (5%)
Query: 20 FILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLPDQWIALINHWMSEKSKKIS 79
F+L+T W+ +KA LK+K+FD N + E + V QW LINHW S ++ S
Sbjct: 923 FVLETSHMIWKDYKADLKKKHFDANLTDEELMDRRDLRVNEAQWKWLINHWRSPEAVARS 982
Query: 80 KQNKENCRKKKALHTAGTNSFARTREEMRQKDPAKNPHRAIVYIQTHKRKTGKNL---NG 136
+ K N + LHTAG+ S AR +M K + P R V+++THKRK G+ +
Sbjct: 983 IRGKANRGMLRMLHTAGSKSHARVGHDMGVK-TGRPPRRDEVFVETHKRKNGEIIPEAAE 1041
Query: 137 HVDNLKKLVVEQPALADTSEGRTAWKGDALNQILGDDKP-GHVHGLGLVPKPKQV 190
V+ LK+ P L + +T +GD +++ G +P G V LG P P+ V
Sbjct: 1042 TVEMLKEAAEVNPELKN----KTIQEGDLYSRVCGTKEPRGRVRVLGKGPTPQDV 1092
>Os12g0417000 Putative plant transposon protein family protein
Length = 605
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 91/175 (52%), Gaps = 9/175 (5%)
Query: 20 FILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLPDQWIALINHWMSEKSKKIS 79
F+L+T W+ +KA LK+K+FD N + E + V QW LINHW S ++ S
Sbjct: 228 FVLETSHMIWKDYKADLKKKHFDANLTDEELMDRRDLRVNEAQWKWLINHWRSPEAVARS 287
Query: 80 KQNKENCRKKKALHTAGTNSFARTREEMRQKDPAKNPHRAIVYIQTHKRKTGKNL---NG 136
+ K N + LHTAG+ S AR +M K + P R V+++THKRK G+ +
Sbjct: 288 IRGKANRGMLRMLHTAGSKSHARVGHDMGVK-TGRPPRRDEVFVETHKRKNGEIIPEAAE 346
Query: 137 HVDNLKKLVVEQPALADTSEGRTAWKGDALNQILGDDKP-GHVHGLGLVPKPKQV 190
V+ LK+ P L + +T +GD +++ G +P G V LG P P+ V
Sbjct: 347 TVEMLKEAAEVNPELKN----KTIQEGDLYSRVCGTKEPRGRVRVLGKGPTPQDV 397
>Os10g0409366
Length = 603
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 17 MEEFILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLPDQWIALINHWMSEKSK 76
++E+++++ ++W+ K +LK KYFD K+ + + + W L+ W SEK K
Sbjct: 186 LKEYVMRSAHKKWKDFKNRLKAKYFDPEKTNKELWKKHDSRISLKVWKWLVCFWRSEKGK 245
Query: 77 KISKQNKENCRKKKALHTAGTNSFARTREEMRQKDPAKNPHRAIVYIQTHKRKTGKNLNG 136
S + K N K A+HT GT S A R +M +K + RA V+ + RK G+
Sbjct: 246 ARSNRGKANRAKMVAVHTIGTRSLANVRHDM-EKRKGRKVSRAEVFKVAYTRKDGRPQPA 304
Query: 137 HVDNLKKL---VVEQPALADTSEGRTAWKGDALNQILGDDKPGHVH 179
H + K+ + E+P D + +GD L+ +LG + G +
Sbjct: 305 HEVTIAKIDEKLTEEPEFVD----KPIEEGDYLSNLLGKENRGRIQ 346
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.132 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,147,052
Number of extensions: 284718
Number of successful extensions: 815
Number of sequences better than 1.0e-10: 20
Number of HSP's gapped: 798
Number of HSP's successfully gapped: 20
Length of query: 196
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 100
Effective length of database: 12,023,257
Effective search space: 1202325700
Effective search space used: 1202325700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 153 (63.5 bits)