Os05g0202500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0202500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.14 | 0.572 | 11.4 | -2.59 | 0.708 | -0.455 | 0.624 | 0.298 | -0.21 | 1.86 | 21 | 37 | -- | -- |
| 148.51 | 0.568 | 11.4 | -2.51 | 0.713 | -0.464 | 0.824 | -- | -0.194 | 1.88 | 21 | 38 | -- | -- |
| 149.18 | 0.569 | 11.4 | -2.67 | 0.702 | -0.442 | -- | 0.569 | -0.226 | 1.75 | 21.07 | 46 | -- | -- |
| 151.02 | 0.572 | 11.4 | -2.54 | 0.707 | -0.464 | -- | -- | -0.196 | 1.73 | 20.97 | 47 | -- | -- |
| 174.72 | 0.616 | 11.4 | -2.73 | -- | -0.303 | -- | 0.706 | -0.205 | -- | 21.4 | 534 | -- | -- |
| 158.64 | 0.59 | 11.3 | -2.39 | 0.574 | -- | 0.798 | -- | -0.0889 | 2.09 | -- | -- | -- | -- |
| 160.96 | 0.594 | 11.3 | -2.42 | 0.574 | -- | -- | -- | -0.093 | 1.82 | -- | -- | -- | -- |
| 170.75 | 0.609 | 11.4 | -2.58 | -- | -0.497 | -- | -- | -0.202 | -- | 25.5 | 1035 | -- | -- |
| 303.86 | 0.812 | 11.3 | -- | 0.272 | 0.43 | -- | -- | 0.193 | 1.22 | 27.7 | 2 | -- | -- |
| 180.9 | 0.628 | 11.3 | -2.39 | -- | -- | -- | -- | -0.0799 | -- | -- | -- | -- | -- |
| 314.72 | 0.83 | 11.3 | -- | 0.53 | -- | -- | -- | 0.176 | 1.69 | -- | -- | -- | -- |
| 307.48 | 0.817 | 11.3 | -- | -- | 0.549 | -- | -- | 0.2 | -- | 27.67 | 2 | -- | -- |
| 331.81 | 0.85 | 11.3 | -- | -- | -- | -- | -- | 0.185 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 143.59 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 3 | 144.38 | temperature | 20.0 | 30 | > th | dose independent | rect. | 8 | 22 |
| 11 | 145.56 | humidity | 80.0 | 720 | > th | dose independent | rect. | 20 | 2 |
| 14 | 145.66 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 4 |
| 20 | 145.89 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 22 | 146.09 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 10 |
| 23 | 146.09 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 28 | 146.38 | temperature | 30.0 | 90 | < th | dose independent | rect. | 8 | 21 |
| 29 | 146.41 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 33 | 146.44 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 20 | 9 |
| 34 | 146.45 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 9 |
| 37 | 146.64 | wind | 9.0 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 40 | 146.66 | temperature | 20.0 | 90 | > th | dose independent | rect. | 8 | 17 |
| 43 | 146.76 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 9 |
| 51 | 146.86 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 53 | 146.88 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 56 | 146.88 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 58 | 146.88 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 59 | 146.88 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 60 | 146.88 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 68 | 146.97 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 69 | 146.98 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 77 | 147.19 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 84 | 147.30 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 21 |
| 89 | 147.36 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 95 | 147.41 | temperature | 25.0 | 720 | > th | dose independent | rect. | 14 | 8 |
| 99 | 147.44 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 22 | 21 |
| 106 | 147.49 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 112 | 147.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 115 | 147.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 13 |
| 129 | 147.58 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 141 | 147.70 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 23 | 1 |
| 143 | 147.72 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 8 | 21 |
| 145 | 147.73 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 146 | 147.74 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 149 | 147.74 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 22 |
| 150 | 147.75 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 12 |
| 177 | 147.96 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 16 |
| 191 | 148.08 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 20 | 7 |
| 207 | 148.16 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 215 | 148.20 | atmosphere | 1010.0 | 720 | < th | dose independent | rect. | 16 | 3 |
| 219 | 148.21 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 16 | 6 |
| 231 | 148.26 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 10 | 21 |
| 234 | 148.28 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 23 | 7 |
| 239 | 148.32 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 248 | 148.34 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 264 | 148.41 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 17 | 12 |
| 273 | 148.44 | temperature | 25.0 | 720 | > th | dose independent | rect. | 9 | 15 |
| 295 | 148.53 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 304 | 148.54 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 314 | 148.59 | temperature | 25.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 322 | 148.61 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 341 | 148.69 | temperature | 15.0 | 720 | > th | dose independent | rect. | 24 | 19 |
| 347 | 148.69 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 348 | 148.70 | temperature | 25.0 | 720 | > th | dose independent | sin | 19 | NA |
| 350 | 148.70 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 355 | 148.73 | temperature | 25.0 | 30 | < th | dose dependent | sin | 7 | NA |
| 372 | 148.80 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 375 | 148.81 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 390 | 148.85 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 410 | 148.89 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 23 | 15 |
| 416 | 148.92 | wind | 9.0 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 418 | 148.92 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 421 | 148.93 | temperature | 25.0 | 720 | < th | dose independent | rect. | 14 | 9 |
| 437 | 148.98 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 17 |
| 438 | 148.98 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 4 | 20 |
| 439 | 148.98 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 440 | 148.99 | temperature | 25.0 | 720 | < th | dose independent | rect. | 13 | 11 |
| 441 | 148.99 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 454 | 149.01 | temperature | 20.0 | 720 | > th | dose independent | rect. | 9 | 10 |
| 457 | 149.01 | wind | 1.0 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 463 | 149.03 | wind | 1.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 469 | 149.04 | temperature | 30.0 | 90 | < th | dose independent | rect. | 8 | 14 |
| 488 | 149.06 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 500 | 149.08 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 21 | 15 |
| 502 | 149.08 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 504 | 149.08 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 21 | 15 |
| 514 | 149.10 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 516 | 149.11 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 23 | 13 |
| 520 | 149.12 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 525 | 149.13 | radiation | 30.0 | 720 | < th | dose independent | rect. | 24 | 9 |
| 532 | 149.14 | temperature | 25.0 | 720 | < th | dose independent | rect. | 11 | 13 |
| 551 | 149.17 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 561 | 149.19 | temperature | 25.0 | 720 | < th | dose independent | rect. | 18 | 5 |
| 564 | 149.19 | temperature | 30.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 578 | 149.21 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 606 | 149.26 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 607 | 149.26 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 23 | 20 |
| 625 | 149.28 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 20 | 9 |
| 639 | 149.30 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 667 | 149.35 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 696 | 149.38 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 16 | 19 |
| 700 | 149.38 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 706 | 149.40 | temperature | 20.0 | 30 | > th | dose independent | rect. | 16 | 14 |
| 719 | 149.42 | temperature | 15.0 | 720 | > th | dose independent | rect. | 16 | 19 |
| 725 | 149.43 | wind | 5.0 | 720 | < th | dose independent | rect. | 24 | 1 |
| 728 | 149.43 | temperature | 15.0 | 720 | > th | dose independent | rect. | 13 | 23 |
| 768 | 149.48 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 771 | 149.48 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 775 | 149.48 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 781 | 149.48 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 793 | 149.48 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 841 | 149.55 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 19 | 21 |
| 854 | 149.57 | humidity | 70.0 | 90 | > th | dose independent | rect. | 16 | 13 |
| 862 | 149.58 | radiation | 1.0 | 720 | > th | dose independent | rect. | 7 | 5 |
| 867 | 149.58 | temperature | 30.0 | 720 | < th | dose dependent | sin | 15 | NA |
| 896 | 149.62 | humidity | 90.0 | 720 | > th | dose independent | rect. | 23 | 1 |
| 902 | 149.62 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 13 |
| 932 | 149.67 | temperature | 20.0 | 30 | > th | dose independent | rect. | 16 | 22 |
| 950 | 149.70 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 951 | 149.70 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 11 | 5 |
| 961 | 149.71 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 12 |
| 962 | 149.71 | temperature | 15.0 | 720 | > th | dose independent | rect. | 19 | 22 |
| 964 | 149.71 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 12 |
| 974 | 149.73 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 23 | 10 |
| 994 | 149.76 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 5 |
| 998 | 149.77 | temperature | 15.0 | 720 | > th | dose independent | rect. | 19 | 14 |