Os01g0768400 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0768400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	5.34	(0.0349)	R²	:	0.621
β₁	:	-2.17	(0.131)	R²_dD	:	0.257	R²_D	:	0.233
β₂	:	0.729	(0.0833)	R²_dC	:	0.0654	R²_C	:	0.041
β₃	:	0.814	(0.108)	R²_dE	:	0.0586	R²_E	:	0.0435
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	0.946	(0.0789)	R²_dN8	:	0.186	R²_N8	:	0.279
σ	:	0.641
deviance	:	189.56
__

_____

C
peak time of C	:	1.42
E
wheather	:	temperature
threshold	:	21.4
memory length	:	780
response mode	:	> th
dose dependency	:	dose independent
G
type of G	:	no
peak or start time of G	:	--
open length of G	:	--

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
189.52	0.647	5.34	-2.17	0.73	0.813	-0.107	0.0221	0.947	1.42	21.37	777	--	--
189.52	0.641	5.34	-2.17	0.73	0.812	-0.102	--	0.946	1.42	21.37	779	--	--
189.56	0.641	5.34	-2.17	0.729	0.815	--	-0.00102	0.946	1.41	21.4	780	--	--
189.56	0.641	5.34	-2.17	0.729	0.814	--	--	0.946	1.42	21.4	780	--	--
220.79	0.692	5.34	-2.21	--	0.986	--	-0.00679	0.913	--	21.38	840	--	--
212.11	0.683	5.29	-1.88	0.83	--	-0.197	--	1.17	0.872	--	--	--	--
212.27	0.682	5.29	-1.87	0.83	--	--	--	1.17	0.868	--	--	--	--
220.79	0.692	5.34	-2.21	--	0.986	--	--	0.914	--	21.37	839	--	--
303.9	0.816	5.25	--	0.844	0.138	--	--	1.35	0.779	21.4	780	--	--
255.25	0.747	5.28	-1.84	--	--	--	--	1.18	--	--	--	--	--
304.86	0.817	5.25	--	0.8	--	--	--	1.38	0.764	--	--	--	--
333.91	0.851	5.24	--	--	0.466	--	--	1.28	--	22.3	855	--	--
344.92	0.867	5.23	--	--	--	--	--	1.39	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	186.78	radiation	1.0	4320	< th	dose dependent	rect.	7	1
2	187.71	radiation	1.0	4320	< th	dose independent	rect.	7	1
3	187.73	radiation	1.0	4320	> th	dose independent	rect.	7	1
5	188.85	radiation	1.0	4320	> th	dose independent	rect.	6	3
6	188.87	radiation	1.0	4320	< th	dose independent	rect.	6	3
7	188.96	temperature	20.0	720	< th	dose independent	rect.	5	1
11	189.22	temperature	20.0	720	< th	dose independent	rect.	3	3
18	190.07	temperature	20.0	720	> th	dose independent	rect.	1	6
19	190.29	humidity	80.0	4320	< th	dose independent	rect.	9	1
20	190.39	humidity	90.0	14400	> th	dose independent	rect.	13	1
22	190.54	temperature	20.0	720	> th	dose independent	rect.	3	4
25	190.58	radiation	1.0	4320	< th	dose independent	rect.	6	6
26	190.60	wind	1.0	1440	< th	dose independent	rect.	12	1
27	190.61	radiation	1.0	4320	> th	dose independent	rect.	6	6
29	190.69	precipitation	0.1	14400	> th	dose independent	rect.	7	1
30	190.69	precipitation	0.1	43200	> th	dose independent	rect.	22	1
31	190.69	precipitation	0.1	14400	> th	dose dependent	rect.	7	1
32	190.69	precipitation	0.1	43200	> th	dose dependent	rect.	22	1
33	190.71	precipitation	0.1	14400	> th	dose independent	rect.	5	3
35	190.74	precipitation	0.1	14400	< th	dose independent	rect.	5	3
37	190.74	precipitation	0.1	14400	< th	dose dependent	rect.	5	3
39	190.82	precipitation	0.1	14400	> th	dose dependent	rect.	5	3
41	190.84	precipitation	0.1	14400	< th	dose independent	rect.	14	2
42	190.84	precipitation	0.1	14400	< th	dose dependent	rect.	14	2
45	190.99	precipitation	0.1	43200	< th	dose independent	rect.	22	1
46	190.99	precipitation	0.1	43200	< th	dose dependent	rect.	22	1
47	191.00	temperature	15.0	720	> th	dose dependent	rect.	1	7
49	191.06	precipitation	0.1	14400	> th	dose independent	rect.	14	2
50	191.06	precipitation	0.1	14400	> th	dose dependent	rect.	14	2
57	191.18	precipitation	0.1	14400	> th	dose independent	rect.	4	6
58	191.20	precipitation	0.1	14400	> th	dose dependent	rect.	4	6
59	191.21	temperature	20.0	720	> th	dose independent	rect.	23	8
61	191.23	wind	9.0	43200	< th	dose independent	rect.	18	1
62	191.23	precipitation	0.1	14400	< th	dose independent	rect.	7	1
63	191.23	precipitation	0.1	14400	< th	dose independent	rect.	4	6
64	191.23	precipitation	0.1	14400	< th	dose dependent	rect.	7	1
65	191.23	precipitation	0.1	14400	< th	dose dependent	rect.	4	6
66	191.24	wind	9.0	43200	> th	dose independent	rect.	18	1
71	191.37	humidity	60.0	14400	< th	dose independent	rect.	11	1
74	191.41	humidity	70.0	1440	> th	dose independent	rect.	11	1
77	191.42	precipitation	0.1	43200	> th	dose dependent	rect.	21	3
87	191.51	temperature	15.0	720	> th	dose dependent	rect.	23	9
90	191.60	temperature	25.0	720	< th	dose dependent	sin	8	NA
92	191.63	humidity	80.0	4320	> th	dose independent	rect.	9	1
94	191.63	precipitation	0.1	14400	> th	dose dependent	rect.	4	9
112	191.89	humidity	60.0	14400	< th	dose dependent	rect.	12	1
113	191.89	humidity	90.0	4320	> th	dose dependent	rect.	7	2
114	191.92	temperature	25.0	14400	> th	dose independent	rect.	12	1
115	191.93	temperature	25.0	720	< th	dose dependent	rect.	4	1
117	191.93	temperature	25.0	720	< th	dose dependent	rect.	21	14
121	191.98	temperature	20.0	720	> th	dose independent	sin	7	NA
122	191.98	atmosphere	1005.0	43200	< th	dose independent	rect.	1	1
125	192.00	wind	1.0	1440	> th	dose independent	rect.	12	1
129	192.01	precipitation	0.1	14400	> th	dose independent	rect.	4	9
130	192.01	temperature	25.0	720	< th	dose dependent	rect.	3	3
133	192.03	temperature	25.0	720	< th	dose dependent	rect.	23	11
134	192.04	wind	1.0	43200	< th	dose dependent	rect.	6	1
139	192.07	atmosphere	1005.0	43200	> th	dose independent	rect.	1	1
141	192.09	precipitation	0.1	14400	< th	dose independent	rect.	4	9
143	192.09	precipitation	0.1	14400	< th	dose dependent	rect.	4	9
161	192.18	temperature	25.0	720	< th	dose dependent	rect.	1	6
162	192.18	temperature	25.0	720	< th	dose dependent	rect.	23	8
165	192.19	precipitation	0.1	14400	> th	dose independent	rect.	4	12
172	192.23	precipitation	0.1	14400	< th	dose independent	rect.	4	12
173	192.23	precipitation	0.1	14400	< th	dose dependent	rect.	4	12
179	192.26	temperature	20.0	720	> th	dose independent	rect.	23	16
183	192.29	temperature	20.0	720	> th	dose independent	rect.	23	14
188	192.30	radiation	1.0	4320	< th	dose dependent	rect.	6	6
191	192.31	wind	9.0	43200	> th	dose dependent	rect.	18	1
192	192.31	temperature	25.0	720	< th	dose dependent	rect.	1	8
205	192.36	wind	1.0	43200	< th	dose dependent	rect.	5	3
226	192.42	radiation	30.0	43200	> th	dose independent	rect.	11	1
230	192.43	temperature	25.0	14400	> th	dose independent	rect.	10	4
237	192.46	atmosphere	1005.0	43200	> th	dose independent	rect.	1	3
239	192.48	temperature	25.0	14400	< th	dose independent	rect.	10	1
240	192.48	atmosphere	1005.0	43200	> th	dose independent	rect.	3	1
243	192.49	temperature	20.0	720	> th	dose independent	rect.	23	12
246	192.50	temperature	20.0	720	< th	dose independent	sin	7	NA
277	192.64	humidity	80.0	14400	> th	dose dependent	rect.	12	3
280	192.65	temperature	25.0	14400	< th	dose independent	rect.	10	3
284	192.66	temperature	20.0	720	< th	dose independent	rect.	24	15
312	192.75	temperature	20.0	720	> th	dose independent	rect.	1	14
320	192.78	atmosphere	1005.0	43200	< th	dose independent	rect.	3	1
330	192.80	temperature	20.0	720	> th	dose independent	rect.	1	12
332	192.81	temperature	25.0	14400	< th	dose independent	rect.	12	1
341	192.83	radiation	10.0	43200	< th	dose dependent	rect.	12	1
359	192.89	precipitation	0.1	43200	> th	dose dependent	rect.	18	2
361	192.90	atmosphere	1005.0	43200	< th	dose independent	rect.	23	5
367	192.91	temperature	20.0	720	> th	dose independent	rect.	21	16
381	192.95	temperature	25.0	14400	> th	dose independent	rect.	8	7
389	192.98	wind	1.0	1440	< th	dose dependent	rect.	12	2
410	193.04	wind	9.0	14400	> th	dose independent	rect.	6	5
441	193.11	precipitation	0.1	43200	> th	dose dependent	rect.	16	1
460	193.18	temperature	20.0	1440	> th	dose independent	rect.	5	1
466	193.19	humidity	70.0	1440	< th	dose independent	rect.	11	1
469	193.20	wind	1.0	43200	> th	dose independent	rect.	4	4
471	193.20	wind	1.0	43200	> th	dose dependent	rect.	5	1
484	193.25	radiation	10.0	4320	< th	dose independent	rect.	10	7
493	193.27	humidity	80.0	14400	> th	dose dependent	rect.	9	6
505	193.31	temperature	25.0	14400	< th	dose independent	rect.	8	7
523	193.34	wind	1.0	1440	< th	dose dependent	rect.	12	7
542	193.39	atmosphere	1005.0	43200	< th	dose independent	rect.	23	1
595	193.52	wind	9.0	14400	< th	dose independent	rect.	6	5
601	193.54	wind	1.0	43200	> th	dose independent	rect.	5	2
614	193.56	wind	1.0	43200	> th	dose dependent	rect.	1	1
618	193.57	humidity	50.0	14400	> th	dose independent	rect.	14	2
627	193.59	radiation	20.0	1440	< th	dose independent	rect.	11	1
635	193.61	radiation	10.0	43200	> th	dose independent	rect.	13	1
659	193.67	precipitation	0.1	43200	< th	dose independent	rect.	16	1
660	193.67	precipitation	0.1	43200	< th	dose dependent	rect.	16	1
662	193.68	wind	9.0	43200	< th	dose dependent	rect.	5	1
666	193.69	humidity	60.0	14400	< th	dose dependent	rect.	18	21
681	193.74	radiation	40.0	43200	> th	dose independent	rect.	13	1
696	193.75	precipitation	0.1	43200	> th	dose independent	rect.	16	1
776	193.92	radiation	10.0	4320	< th	dose independent	rect.	16	1
792	193.95	wind	5.0	14400	> th	dose independent	rect.	14	1
810	193.98	wind	1.0	1440	< th	dose independent	rect.	12	7
818	193.99	humidity	90.0	14400	> th	dose independent	rect.	7	1
859	194.05	radiation	20.0	43200	> th	dose independent	rect.	11	3
877	194.08	humidity	90.0	14400	> th	dose dependent	rect.	7	10
883	194.10	humidity	80.0	14400	> th	dose independent	rect.	10	5
893	194.13	humidity	90.0	14400	> th	dose dependent	rect.	18	11
916	194.18	wind	1.0	1440	< th	dose dependent	rect.	9	10
933	194.21	wind	5.0	14400	< th	dose independent	rect.	14	1
945	194.22	precipitation	0.1	14400	> th	dose dependent	rect.	4	12
969	194.28	radiation	20.0	43200	> th	dose independent	rect.	9	5
981	194.30	humidity	60.0	14400	< th	dose dependent	sin	3	NA