Os10g0195100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : En/Spm-like transposon proteins family protein.
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Os10g0195100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : En/Spm-like transposon proteins family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.15 | 0.402 | 9.69 | -0.578 | 0.609 | -0.912 | 0.47 | -0.251 | 0.0787 | 16 | 31.1 | 7 | -- | -- |
| 73.18 | 0.398 | 9.69 | -0.608 | 0.604 | -0.905 | 0.531 | -- | 0.0701 | 16 | 31.16 | 2 | -- | -- |
| 73.62 | 0.4 | 9.68 | -0.532 | 0.623 | -0.879 | -- | -0.514 | 0.1 | 15.8 | 31.15 | 6 | -- | -- |
| 73.98 | 0.401 | 9.69 | -0.61 | 0.613 | -0.914 | -- | -- | 0.0722 | 15.9 | 31.29 | 2 | -- | -- |
| 88 | 0.437 | 9.69 | -0.625 | -- | -1.48 | -- | -0.904 | 0.00664 | -- | 31.1 | 55 | -- | -- |
| 83.58 | 0.429 | 9.66 | -0.415 | 0.894 | -- | 0.565 | -- | 0.228 | 15.4 | -- | -- | -- | -- |
| 84.55 | 0.431 | 9.66 | -0.404 | 0.894 | -- | -- | -- | 0.231 | 15.3 | -- | -- | -- | -- |
| 88.72 | 0.439 | 9.71 | -0.758 | -- | -1.49 | -- | -- | -0.036 | -- | 31.5 | 13 | -- | -- |
| 82.88 | 0.426 | 9.67 | -- | 0.702 | -0.654 | -- | -- | 0.179 | 15.6 | 31.29 | 2 | -- | -- |
| 129.71 | 0.532 | 9.66 | -0.442 | -- | -- | -- | -- | 0.208 | -- | -- | -- | -- | -- |
| 88.86 | 0.441 | 9.65 | -- | 0.902 | -- | -- | -- | 0.276 | 15.3 | -- | -- | -- | -- |
| 102.89 | 0.472 | 9.68 | -- | -- | -1.28 | -- | -- | 0.0808 | -- | 31.67 | 3 | -- | -- |
| 134.88 | 0.542 | 9.64 | -- | -- | -- | -- | -- | 0.257 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.95 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 18 |
| 7 | 65.91 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 16 |
| 34 | 68.04 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 42 | 68.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 47 | 68.67 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 58 | 68.97 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 20 | 19 |
| 63 | 69.08 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 21 |
| 69 | 69.25 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 72 | 69.34 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 98 | 69.85 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 19 |
| 137 | 70.34 | temperature | 30.0 | 10 | < th | dose dependent | sin | 2 | NA |
| 138 | 70.38 | temperature | 20.0 | 90 | > th | dose independent | rect. | 20 | 17 |
| 144 | 70.46 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 171 | 70.64 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 6 |
| 195 | 70.86 | humidity | 60.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 199 | 70.89 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 15 |
| 215 | 70.99 | temperature | 30.0 | 30 | < th | dose independent | rect. | 16 | 17 |
| 250 | 71.19 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 306 | 71.52 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 307 | 71.54 | temperature | 20.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 308 | 71.54 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 310 | 71.56 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 18 |
| 344 | 71.77 | wind | 1.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 348 | 71.78 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 22 |
| 370 | 71.87 | temperature | 10.0 | 10 | > th | dose dependent | sin | 2 | NA |
| 389 | 71.93 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 393 | 71.95 | humidity | 90.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 443 | 72.11 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 447 | 72.14 | wind | 1.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 458 | 72.18 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 466 | 72.21 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 467 | 72.21 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 478 | 72.25 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 509 | 72.33 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 6 |
| 531 | 72.40 | temperature | 15.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 540 | 72.40 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 635 | 72.64 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 636 | 72.65 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 22 |
| 659 | 72.72 | radiation | 30.0 | 10 | < th | dose independent | rect. | 12 | 21 |
| 677 | 72.77 | temperature | 30.0 | 10 | < th | dose independent | rect. | 12 | 21 |
| 683 | 72.77 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 725 | 72.85 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 7 |
| 727 | 72.85 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 735 | 72.88 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 737 | 72.88 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 19 |
| 774 | 72.95 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 797 | 73.01 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 819 | 73.05 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 820 | 73.05 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 834 | 73.08 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 835 | 73.08 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 836 | 73.08 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 845 | 73.10 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 23 |
| 859 | 73.12 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 870 | 73.15 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 894 | 73.19 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 900 | 73.20 | radiation | 40.0 | 10 | < th | dose independent | rect. | 15 | 18 |
| 909 | 73.21 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 911 | 73.21 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 912 | 73.21 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 913 | 73.21 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 6 |
| 915 | 73.21 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 916 | 73.21 | temperature | 10.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 917 | 73.21 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 921 | 73.22 | temperature | 30.0 | 90 | < th | dose independent | rect. | 13 | 19 |
| 933 | 73.24 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 935 | 73.24 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 944 | 73.26 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 949 | 73.26 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 974 | 73.31 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 1000 | 73.35 | temperature | 30.0 | 10 | < th | dose dependent | no | NA | NA |