BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0173500 Os05g0173500|AK105434
(628 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0173500 Conserved hypothetical protein 1153 0.0
Os01g0956500 Conserved hypothetical protein 390 e-108
Os01g0967800 Conserved hypothetical protein 140 3e-33
Os01g0961600 Conserved hypothetical protein 137 2e-32
Os01g0970200 115 9e-26
Os01g0969200 Hypothetical protein 94 2e-19
>Os05g0173500 Conserved hypothetical protein
Length = 628
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/628 (90%), Positives = 568/628 (90%)
Query: 1 MPKKPSLSRVASETRLLFSSWEPESPLDATSGSGKDAPADQQEGDGKRGRQRSPGDEARS 60
MPKKPSLSRVASETRLLFSSWEPESPLDATSGSGKDAPADQQEGDGKRGRQRSPGDEARS
Sbjct: 1 MPKKPSLSRVASETRLLFSSWEPESPLDATSGSGKDAPADQQEGDGKRGRQRSPGDEARS 60
Query: 61 LKDRFKGRLKEGVASARLKCLDTLLNESRDLSQGNESKGNLLKSLIQKAELDLWQVKELE 120
LKDRFKGRLKEGVASARLKCLDTLLNESRDLSQGNESKGNLLKSLIQKAELDLWQVKELE
Sbjct: 61 LKDRFKGRLKEGVASARLKCLDTLLNESRDLSQGNESKGNLLKSLIQKAELDLWQVKELE 120
Query: 121 TDPTXXXXXXXXXXXXXXXDGQGDDKERGDLQAVEAYGSPPGKEKVDLQAAKDSSPTAXX 180
TDPT DGQGDDKERGDLQAVEAYGSPPGKEKVDLQAAKDSSPTA
Sbjct: 121 TDPTSGASQSKEEASAAASDGQGDDKERGDLQAVEAYGSPPGKEKVDLQAAKDSSPTAGR 180
Query: 181 XXXXXXXXXYEAQQKESNIQDVKTSSQQETXXXXXXXXXXXXXXXMEESTENLXXXXXXX 240
YEAQQKESNIQDVKTSSQQET MEESTENL
Sbjct: 181 KGKGKRIIGYEAQQKESNIQDVKTSSQQETRKPKRKKQKKRQRRKMEESTENLSCRSGSS 240
Query: 241 XXXXXXXXXXXXIEGEPEQPSFGDLASIAQDHDDKIASDVVDIKQEQESAEDILALLDMM 300
IEGEPEQPSFGDLASIAQDHDDKIASDVVDIKQEQESAEDILALLDMM
Sbjct: 241 PSSSHDATSTSTIEGEPEQPSFGDLASIAQDHDDKIASDVVDIKQEQESAEDILALLDMM 300
Query: 301 DKDAIQEKFNYYLKQLGFESNEYDFWSETYEPEQLTALHERLAIYRIVGYELSKGRKLGK 360
DKDAIQEKFNYYLKQLGFESNEYDFWSETYEPEQLTALHERLAIYRIVGYELSKGRKLGK
Sbjct: 301 DKDAIQEKFNYYLKQLGFESNEYDFWSETYEPEQLTALHERLAIYRIVGYELSKGRKLGK 360
Query: 361 QDIAKLKEQYNPSILRKEGYFRHYEESLEWYFDLEWCKYSGFQDYQRLVLHDNVEFLEWE 420
QDIAKLKEQYNPSILRKEGYFRHYEESLEWYFDLEWCKYSGFQDYQRLVLHDNVEFLEWE
Sbjct: 361 QDIAKLKEQYNPSILRKEGYFRHYEESLEWYFDLEWCKYSGFQDYQRLVLHDNVEFLEWE 420
Query: 421 HYHLNYNTYEDDLAYVRYRARLANETKWIEDYLARDITQAEWRRVKDIASVQALKIARVS 480
HYHLNYNTYEDDLAYVRYRARLANETKWIEDYLARDITQAEWRRVKDIASVQALKIARVS
Sbjct: 421 HYHLNYNTYEDDLAYVRYRARLANETKWIEDYLARDITQAEWRRVKDIASVQALKIARVS 480
Query: 481 GGVKAQAALAGFRDHIWSIQFDFNHYKDFDGVYFKIWKRVAKRKMNFREALLEVYREDMF 540
GGVKAQAALAGFRDHIWSIQFDFNHYKDFDGVYFKIWKRVAKRKMNFREALLEVYREDMF
Sbjct: 481 GGVKAQAALAGFRDHIWSIQFDFNHYKDFDGVYFKIWKRVAKRKMNFREALLEVYREDMF 540
Query: 541 PVRKNGIKYELDNTQLRFKSMKEKYDAHVACLDESVPEDEVRQLIKEAVIKMKPKPHTYL 600
PVRKNGIKYELDNTQLRFKSMKEKYDAHVACLDESVPEDEVRQLIKEAVIKMKPKPHTYL
Sbjct: 541 PVRKNGIKYELDNTQLRFKSMKEKYDAHVACLDESVPEDEVRQLIKEAVIKMKPKPHTYL 600
Query: 601 DYARKKLQISMNIDLITKSTCTLLNYQT 628
DYARKKLQISMNIDLITKSTCTLLNYQT
Sbjct: 601 DYARKKLQISMNIDLITKSTCTLLNYQT 628
>Os01g0956500 Conserved hypothetical protein
Length = 396
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/403 (52%), Positives = 276/403 (68%), Gaps = 23/403 (5%)
Query: 226 MEESTENLXXXXXXXXXXXXXXXXXXXIEGEPEQPSFGDLASIAQDHDDKIASDVVDIKQ 285
M+ESTENL IEGEP +PS GDLA I+++H KQ
Sbjct: 1 MDESTENLSCHSGSPSSSHDGTSTST-IEGEP-KPSSGDLAKISREH-----------KQ 47
Query: 286 EQESAEDILALLDMMDKDAIQEKFNYYLKQLGFESN----EYDFWSETYEPEQLTALHER 341
EQES ED+ LL M D+D I K +YY QL + + + D W E P+QLT LHE+
Sbjct: 48 EQESMEDLEDLLGM-DEDTISNKVSYYFHQLYVQDHLDDDDDDDWLECDGPQQLTELHEQ 106
Query: 342 LAIYRIVGYELSKGRKLGKQDIAKLKEQYNPSILRKEGYFRHYEESLEWYFDLEWCKYSG 401
LA YRI+GYELS GRKL + DIAKLKE+Y PSIL ++GYF++YE+SLEWYFD E + +
Sbjct: 107 LAFYRIIGYELSNGRKLDELDIAKLKEKYPPSILYEKGYFQYYEDSLEWYFDPERFQPAA 166
Query: 402 FQDYQRLVLHDNVEFLEWEHYHLNYNTYEDDLAYVRYRARLANETKWIEDYLAR-----D 456
+YQRLVL DN +++W+ YH NY+TYE DLAYV++ LA++TKW +DYL
Sbjct: 167 LDNYQRLVLCDNGLYMDWDQYHSNYSTYESDLAYVKFCEELAHKTKWFQDYLVLIAVEDK 226
Query: 457 ITQAEWRRVKDIASVQALKIARVSGGVKAQAALAGFRDHIWSIQFDFNHYKDFDGVYFKI 516
IT +W +VK+ +QA+KIA V + F+++IWS++FD +YKDFDGVYF++
Sbjct: 227 ITMGQWDKVKNTVYLQAMKIALRIRVVSLMQVMTAFQEYIWSMRFDCCNYKDFDGVYFEV 286
Query: 517 WKRVAKRKMNFREALLEVYREDMFPVRKNGIKYELDNTQLRFKSMKEKYDAHVACLDESV 576
WKRVAK+KM F +AL E+YREDMFP+R IK EL +T+ RF+SMKE YD +VAC+DE+V
Sbjct: 287 WKRVAKQKMEFTDALSELYREDMFPLRNVDIKDELRSTRGRFRSMKENYDLYVACIDETV 346
Query: 577 PEDEVRQLIKEAVIKMKPKPHTYLDYARKKLQISMNIDLITKS 619
PE E RQLIK+A+I+M PKP TYLDYAR K++I+ +I LITKS
Sbjct: 347 PEKEARQLIKDAIIEMIPKPQTYLDYARNKIKIAEDIGLITKS 389
>Os01g0967800 Conserved hypothetical protein
Length = 550
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 176/347 (50%), Gaps = 26/347 (7%)
Query: 287 QESAEDILALLDM-MDKDAIQEKFNYYLKQLGFESNEYDFWSETYEPEQLTALHERLAIY 345
QE+ E I L ++ + ++ E+F Y+ QL E + D E + Q+T L+ + A Y
Sbjct: 207 QEADEAIKRLNELGLGENISSEEFLTYIDQLN-EQPKIDTSIE-LDDAQVTTLYFQHARY 264
Query: 346 RIVGYELSKGRKLGKQDIAKLKE-----------QYNPSILRKEGYFRHYEE--SLEWYF 392
R+ Y + L +Q +L E + + +R+ +F +EE + +WYF
Sbjct: 265 RVRYY-----KHLSQQPNTELVEDSYHMKLVGEDELSDEFIREMEFFMRFEEDGTFDWYF 319
Query: 393 DLEWCKYSGFQDYQRLVLHDNV--EFLEWEHYHLNYNTYEDDLAYVRYRARLANETKWIE 450
++C + DYQRLV + V E+ W+ Y +N+Y +L Y+ + L+ E KW+E
Sbjct: 320 YPDYCWLAALNDYQRLVPINCVGEEYAYWDDYRGYFNSYHTELQYLDFCKALSKELKWME 379
Query: 451 DYLARDITQAEWRRVKDIASVQALKIARVSGGVKAQAALAGFRDHIWSIQFDFNHYKDFD 510
DY+ + ++W R+ + QA+KIA + A A + D + ++F + KD D
Sbjct: 380 DYVLNKLPSSKWGRICSRGAYQAIKIATRFSKITAALAYNAYYDCLQHMRFYVAYCKDMD 439
Query: 511 GVYFKIWKRVAKRKMNFREALLEVYREDMFPVRKNGIKYELDNTQLRFKSMKEKYDAHVA 570
+YF+IW+RV +K +FR++L EVY + FP R++ +K L+N M+ + A
Sbjct: 440 SLYFEIWQRVNMQKKSFRDSLEEVYNLNKFPSRQDKMKDALENN---CSHMETVFHVCTA 496
Query: 571 CLDESVPEDEVRQLIKEAVIKMKPKPHTYLDYARKKLQISMNIDLIT 617
+ + ED+ +LI +AV K Y Y KK+ I+ I LI+
Sbjct: 497 SVTSEIAEDKALELIAKAVESRMNKAKFYEQYIEKKIDIAQAIGLIS 543
>Os01g0961600 Conserved hypothetical protein
Length = 412
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 306 QEKFNYYLKQLGFESNEYDFWSETYEPEQLTALHERLAIYRIVGYELSKGRKLGKQDIAK 365
Q+ + Y+KQL S D WS +++ + ER A YRI K +D K
Sbjct: 104 QDDYFDYVKQLSPNSRRIDKWS-LLSHDEMIEVKERHARYRI---RFCKMLNKEFEDTMK 159
Query: 366 LKEQYNPSILRKEGYFRHYE--ESLEWYFDLEWCKYSGFQDYQRLVL---HDNVEFLEWE 420
+Y+ L KE YF YE E+L WYF +G DYQ+LVL D+ EFL +
Sbjct: 160 DPAEYSRGELLKENYFLRYERDETLGWYFHPVHTWLAGLNDYQKLVLVNHDDSTEFLARD 219
Query: 421 HYHLNYNTYEDDLAYVRYRARLANETKWIEDYLARDITQAEWRRVKDIASVQALKIARVS 480
YH +NTYE D YV+Y L + KWI DY+ D + EW ++ + QALKIA
Sbjct: 220 DYHSCFNTYEVDEDYVKYCEELPKKIKWIGDYVDLDRSSQEWSKMDNTTFFQALKIATNF 279
Query: 481 GGVKAQAALAGFRDHIWSIQFDFNHYKDFDGVYFKIWKRVAKRKMNFREALLEVYREDMF 540
+ A + +++W ++ + + K++ +IWK VAK+KMNF +AL VY DMF
Sbjct: 280 CHMTVGLAQFAYMEYVWDLR-EISRLKEWPYFLHEIWKLVAKQKMNFNDALKVVYEMDMF 338
Query: 541 PVRKNGIKYELDNTQLRFKSMKEKYDAHVACLDESVPEDEVRQLIKEAVIKMKPKPHTYL 600
K ++ EL+ +L ++ ++ + V E + LI +AV + T
Sbjct: 339 HSFKFAVEAELNGDKLF--GLEYRFSMCSKDISGDVEEGKALDLITKAVYREFHHTQTMC 396
Query: 601 DYARKKLQISMNIDLI 616
YA KK+ ++ I L+
Sbjct: 397 GYAAKKMDMAKKIGLV 412
>Os01g0970200
Length = 333
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 161/352 (45%), Gaps = 69/352 (19%)
Query: 271 DHDDKIASDVVDIKQEQESAEDILALLDM-MDKDAIQEKFNYYLKQLGFESNEYDFWSET 329
+HDD + ++ K +E+ L D+ + +D +KF YL QL E + S
Sbjct: 13 EHDDGAINTMIMEKNVEEANLITQELNDLGLGEDISTDKFRGYLCQLPQERDSPVDISTQ 72
Query: 330 YEPEQLTALHERLAIYRIVGYELSK--GRKLGKQDIAKLKEQYNPSILRKE--------- 378
+QL A +E +YR+ Y+L + R K D + EQY P + K+
Sbjct: 73 LNFDQLDAQNELHELYRVKYYKLLQQVPRTGSKLDHDTMIEQY-PFDMSKQLEEVLMCFE 131
Query: 379 --------------GYFRHYEESLEWYFDLEWCKYSGFQDYQRLVLHD-NVEFLEWEHYH 423
+ ++ + WYF E+CK + DYQRLV+ + + W+ YH
Sbjct: 132 NDGTLDSVDDEVLWEVLKCFDYTFVWYFHPEYCKLAALVDYQRLVIKNYGCMYANWDRYH 191
Query: 424 LNYNTYEDDLAYVRYRARLANETKWIEDYLARDITQAEWRRVKDIASVQALKIARVSGGV 483
+ +NTY+ + Y +Y L+ + KW +V + QA+KIA +
Sbjct: 192 MYFNTYDVEKQYAKYYVELSKKLKW--------------GKVSNRGLYQAVKIATGFPKI 237
Query: 484 KAQAALAGFRDHIWSIQFDFNHYKDFDGVYFKIWKRVAKRKMNFREALLEVYREDMFPVR 543
A+ A GF + DGVYF+IW+RV K+KM+FR+A+ EVY + FPVR
Sbjct: 238 TAKLAYLGFHE--------------LDGVYFEIWQRVTKQKMSFRDAMKEVYELNRFPVR 283
Query: 544 KNGIKYELDNTQLRFKSMKEKYDAHVACLDESVPEDEVRQLIKEAVIKMKPK 595
+ +KY L+ +++A VA EDEV LI EAV K+ K
Sbjct: 284 QQKMKYVLEINDC------SQWEAEVA-------EDEVLGLIAEAVKKLARK 322
>Os01g0969200 Hypothetical protein
Length = 114
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
Query: 506 YKDFDGVYFKIWKRVAKRKMNFREALLEVYREDMFPVRKNGIKYELDNTQLRFKSMKEKY 565
+K+ D VYF+IW+RV K+KM+FR+A+ EVY + FPVR+ +KY L+ + ++
Sbjct: 1 FKELDDVYFEIWQRVTKQKMSFRDAMKEVYELNRFPVRQQKMKYVLEINDC--SQWEAEF 58
Query: 566 DAHVACLDESVPEDEVRQLIKEAVIKMKPKPHTYLDYARKKLQISMNIDLIT 617
AC+ E V ED+V LI +AV K++ KP Y DY +KK+ I+ I LIT
Sbjct: 59 HTCTACITEEVAEDQVLGLIADAVKKLRDKPRFYDDYIKKKINIAQAIGLIT 110
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.132 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,378,990
Number of extensions: 792697
Number of successful extensions: 1836
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1818
Number of HSP's successfully gapped: 6
Length of query: 628
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 521
Effective length of database: 11,448,903
Effective search space: 5964878463
Effective search space used: 5964878463
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 159 (65.9 bits)