Os01g0961600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0961600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.08 | 0.431 | 7.84 | -1.97 | 0.74 | -0.696 | -0.646 | 0.263 | 0.0995 | 5.8 | 20.7 | 369 | -- | -- |
| 84.26 | 0.428 | 7.83 | -1.92 | 0.742 | -0.717 | -0.528 | -- | 0.11 | 5.82 | 20.71 | 384 | -- | -- |
| 84.95 | 0.429 | 7.83 | -1.93 | 0.755 | -0.722 | -- | 0.0437 | 0.11 | 5.74 | 20.71 | 388 | -- | -- |
| 84.93 | 0.429 | 7.83 | -1.92 | 0.741 | -0.723 | -- | -- | 0.111 | 5.78 | 20.77 | 388 | -- | -- |
| 106.41 | 0.48 | 7.84 | -2 | -- | -0.832 | -- | -0.123 | 0.11 | -- | 20.9 | 1316 | -- | -- |
| 102.19 | 0.474 | 7.8 | -1.67 | 0.631 | -- | -0.6 | -- | 0.277 | 5.85 | -- | -- | -- | -- |
| 103.07 | 0.475 | 7.79 | -1.67 | 0.628 | -- | -- | -- | 0.279 | 5.79 | -- | -- | -- | -- |
| 105.77 | 0.479 | 7.85 | -1.99 | -- | -0.804 | -- | -- | 0.0798 | -- | 21.4 | 1353 | -- | -- |
| 171.75 | 0.614 | 7.77 | -- | 0.636 | -0.332 | -- | -- | 0.405 | 5.39 | 20.77 | 388 | -- | -- |
| 123.5 | 0.519 | 7.8 | -1.65 | -- | -- | -- | -- | 0.294 | -- | -- | -- | -- | -- |
| 176.94 | 0.622 | 7.75 | -- | 0.602 | -- | -- | -- | 0.466 | 5.91 | -- | -- | -- | -- |
| 192.47 | 0.648 | 7.77 | -- | -- | -0.251 | -- | -- | 0.433 | -- | 20.77 | 388 | -- | -- |
| 195.73 | 0.653 | 7.76 | -- | -- | -- | -- | -- | 0.478 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.75 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 2 | 72.05 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 6 | 73.59 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 7 | 73.85 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 8 | 74.04 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 13 | 74.28 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 14 | 74.62 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 17 | 74.75 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 20 | 74.84 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 5 |
| 21 | 74.87 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 24 | 74.97 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 29 | 75.18 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 30 | 75.25 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 33 | 75.42 | wind | 3.0 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 35 | 75.48 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 38 | 75.55 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 51 | 75.82 | wind | 3.0 | 43200 | > th | dose independent | rect. | 22 | 9 |
| 57 | 75.89 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 117 | 76.63 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 132 | 76.77 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 9 |
| 149 | 76.90 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 167 | 77.06 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 173 | 77.11 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 174 | 77.12 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 185 | 77.22 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 187 | 77.22 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 6 |
| 256 | 77.68 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 279 | 77.84 | wind | 9.0 | 14400 | > th | dose independent | rect. | 22 | 15 |
| 293 | 77.92 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 300 | 77.94 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 301 | 77.95 | wind | 3.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 310 | 77.99 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 320 | 78.02 | wind | 3.0 | 43200 | < th | dose independent | rect. | 22 | 15 |
| 340 | 78.15 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 351 | 78.20 | wind | 3.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 357 | 78.25 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 375 | 78.31 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 425 | 78.57 | wind | 3.0 | 43200 | > th | dose independent | rect. | 22 | 15 |
| 426 | 78.57 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 515 | 78.98 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 582 | 79.25 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 606 | 79.33 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 685 | 79.67 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 725 | 79.82 | wind | 5.0 | 43200 | < th | dose dependent | sin | 9 | NA |
| 760 | 79.93 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 794 | 80.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 795 | 80.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 798 | 80.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 799 | 80.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 838 | 80.13 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 14 |
| 862 | 80.20 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 899 | 80.29 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 903 | 80.29 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 917 | 80.33 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 922 | 80.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 924 | 80.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 994 | 80.53 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 996 | 80.54 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |