Os01g0969200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0969200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.12 | 0.286 | 9.1 | -0.876 | 1.4 | -0.738 | -0.573 | -1.07 | -0.255 | 15.2 | 8.101 | 1359 | -- | -- |
| 38.04 | 0.287 | 9.07 | -0.647 | 1.39 | -0.758 | -0.49 | -- | -0.194 | 15.3 | 4.779 | 1250 | -- | -- |
| 38.14 | 0.288 | 9.1 | -0.868 | 1.41 | -0.73 | -- | -0.977 | -0.254 | 15.3 | 7.586 | 1406 | -- | -- |
| 38.79 | 0.29 | 9.07 | -0.654 | 1.39 | -0.763 | -- | -- | -0.196 | 15.4 | 4.769 | 1229 | -- | -- |
| 144.65 | 0.56 | 9.08 | -0.736 | -- | -1.05 | -- | -0.84 | -0.202 | -- | 13.94 | 2598 | -- | -- |
| 47.54 | 0.323 | 9.1 | -0.876 | 1.46 | -- | -0.468 | -- | -0.33 | 15.2 | -- | -- | -- | -- |
| 48.24 | 0.325 | 9.1 | -0.886 | 1.46 | -- | -- | -- | -0.332 | 15.2 | -- | -- | -- | -- |
| 141.16 | 0.556 | 9.13 | -1.11 | -- | 1.05 | -- | -- | -0.495 | -- | 23.8 | 1180 | -- | -- |
| 38.96 | 0.291 | 9.02 | -- | 1.45 | -0.947 | -- | -- | 0.0346 | 15.3 | -8.587 | 35025 | -- | -- |
| 169.01 | 0.607 | 9.1 | -0.948 | -- | -- | -- | -- | -0.371 | -- | -- | -- | -- | -- |
| 68.92 | 0.388 | 9.08 | -- | 1.48 | -- | -- | -- | -0.234 | 15.2 | -- | -- | -- | -- |
| 155.85 | 0.581 | 9.01 | -- | -- | -0.904 | -- | -- | 0.0584 | -- | 19.45 | 47520 | -- | -- |
| 192.7 | 0.648 | 9.08 | -- | -- | -- | -- | -- | -0.266 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 7 | 34.61 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 4 |
| 15 | 35.15 | temperature | 10 | 90 | > th | dose dependent | rect. | 3 | 18 |
| 17 | 35.24 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 21 |
| 24 | 35.38 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 19 |
| 26 | 35.42 | temperature | 10 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 28 | 35.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 39 | 35.72 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 19 |
| 55 | 35.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 13 |
| 71 | 36.10 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 77 | 36.19 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 97 | 36.35 | temperature | 30 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 104 | 36.42 | humidity | 70 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 110 | 36.46 | temperature | 30 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 115 | 36.47 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 117 | 36.49 | temperature | 30 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 120 | 36.50 | humidity | 70 | 4320 | < th | dose independent | rect. | 19 | 12 |
| 165 | 36.62 | humidity | 70 | 4320 | < th | dose dependent | rect. | 19 | 12 |
| 166 | 36.63 | temperature | 30 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 190 | 36.69 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 193 | 36.70 | humidity | 70 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 213 | 36.75 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 5 |
| 215 | 36.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 239 | 36.80 | temperature | 10 | 1440 | > th | dose dependent | sin | 4 | NA |
| 273 | 36.83 | radiation | 40 | 4320 | < th | dose dependent | rect. | 22 | 8 |
| 397 | 36.95 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 509 | 37.07 | radiation | 10 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 543 | 37.10 | humidity | 70 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 579 | 37.13 | temperature | 25 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 586 | 37.13 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 13 |
| 607 | 37.15 | humidity | 70 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 646 | 37.17 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 647 | 37.18 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 664 | 37.19 | temperature | 30 | 270 | < th | dose independent | rect. | 5 | 10 |
| 684 | 37.19 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 686 | 37.19 | temperature | 10 | 1440 | > th | dose dependent | rect. | 14 | 23 |
| 693 | 37.20 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 4 |
| 794 | 37.25 | temperature | 30 | 1440 | < th | dose dependent | sin | 5 | NA |
| 807 | 37.26 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 811 | 37.26 | wind | 1 | 14400 | < th | dose dependent | rect. | 18 | 6 |
| 823 | 37.27 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 826 | 37.27 | temperature | 30 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 830 | 37.27 | humidity | 50 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 887 | 37.30 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 12 |