Os01g0967800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0967800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8.25 | 0.135 | 12.8 | -0.00743 | 0.727 | -0.299 | -0.187 | 0.361 | 0.0718 | 20.6 | 1002 | 11457 | -- | -- |
| 8.32 | 0.134 | 12.8 | -0.0286 | 0.731 | -0.243 | -0.194 | -- | 0.0785 | 20.6 | 1002 | 11385 | -- | -- |
| 8.36 | 0.135 | 12.8 | -0.0042 | 0.725 | -0.304 | -- | 0.371 | 0.07 | 20.6 | 1002 | 11383 | -- | -- |
| 8.44 | 0.135 | 12.8 | -0.0262 | 0.729 | -0.238 | -- | -- | 0.078 | 20.6 | 1002 | 11377 | -- | -- |
| 37.99 | 0.287 | 12.7 | -0.0147 | -- | -0.307 | -- | 0.484 | 0.055 | -- | 1002 | 12820 | -- | -- |
| 9.55 | 0.145 | 12.7 | -0.0605 | 0.728 | -- | -0.199 | -- | 0.115 | 20.6 | -- | -- | -- | -- |
| 9.68 | 0.146 | 12.7 | -0.0542 | 0.728 | -- | -- | -- | 0.115 | 20.6 | -- | -- | -- | -- |
| 38.14 | 0.288 | 12.7 | -0.0128 | -- | -0.241 | -- | -- | 0.0704 | -- | 1003 | 12481 | -- | -- |
| 8.45 | 0.135 | 12.8 | -- | 0.728 | -0.244 | -- | -- | 0.0788 | 20.6 | 1002 | 11377 | -- | -- |
| 39.59 | 0.294 | 12.7 | -0.0562 | -- | -- | -- | -- | 0.109 | -- | -- | -- | -- | -- |
| 9.76 | 0.146 | 12.7 | -- | 0.728 | -- | -- | -- | 0.121 | 20.6 | -- | -- | -- | -- |
| 38.14 | 0.288 | 12.7 | -- | -- | -0.257 | -- | -- | 0.0645 | -- | 1003 | 12481 | -- | -- |
| 39.67 | 0.294 | 12.7 | -- | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 7.93 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 4 | 7.94 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 7 | 7.95 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 25 | 7.98 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 12 |
| 45 | 8.00 | wind | 9.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 50 | 8.01 | wind | 7.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 77 | 8.03 | wind | 9.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 78 | 8.03 | wind | 9.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 117 | 8.07 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 118 | 8.07 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 127 | 8.07 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 129 | 8.08 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 163 | 8.10 | wind | 7.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 193 | 8.11 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 245 | 8.14 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 268 | 8.16 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 269 | 8.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 274 | 8.16 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 283 | 8.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 292 | 8.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 301 | 8.18 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 368 | 8.22 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 372 | 8.22 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 401 | 8.24 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 504 | 8.30 | wind | 7.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 505 | 8.30 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 523 | 8.30 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 4 | 11 |
| 530 | 8.31 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 532 | 8.31 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 533 | 8.31 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 17 | 5 |
| 545 | 8.31 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 546 | 8.31 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 547 | 8.31 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 549 | 8.31 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 2 |
| 611 | 8.33 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 614 | 8.33 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 619 | 8.33 | atmosphere | 1010.0 | 14400 | < th | dose dependent | sin | 13 | NA |
| 803 | 8.35 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 2 | 14 |
| 849 | 8.36 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 861 | 8.36 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 23 | 16 |
| 874 | 8.36 | atmosphere | 1010.0 | 14400 | < th | dose dependent | no | NA | NA |
| 875 | 8.36 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 948 | 8.36 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 19 | 22 |
| 976 | 8.37 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 20 | 9 |
| 979 | 8.37 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 9 | 13 |
| 981 | 8.37 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 1 | 14 |