BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0172300 Os05g0172300|J065178A08
         (86 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os05g0172300  Protein of unknown function DUF632 domain cont...   173   2e-44
Os07g0686500  Protein of unknown function DUF630 domain cont...    87   2e-18
Os03g0321500  Protein of unknown function DUF630 domain cont...    87   3e-18
Os02g0175200                                                       81   2e-16
Os09g0368900  Protein of unknown function DUF632 domain cont...    68   1e-12
Os01g0960200  Protein of unknown function DUF630 domain cont...    66   6e-12

>Os05g0172300 Protein of unknown function DUF632 domain containing protein
          Length = 86

 Score =  173 bits (439), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 86/86 (100%), Positives = 86/86 (100%)

Query: 1  ASEHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKI 60
          ASEHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKI
Sbjct: 1  ASEHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKI 60

Query: 61 RDEELQPQLVELIQGYKLKHHLVAIF 86
          RDEELQPQLVELIQGYKLKHHLVAIF
Sbjct: 61 RDEELQPQLVELIQGYKLKHHLVAIF 86



>Os07g0686500 Protein of unknown function DUF630 domain containing protein
          Length = 714

 Score = 87.4 bits (215), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/68 (66%), Positives = 52/68 (76%)

Query: 7   KTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKIRDEELQ 66
           + YDEKC  LR Q +RG N  L+D TRA VKDLHSR+ VAIQ +D ISK IE IRD+ELQ
Sbjct: 444 RRYDEKCKQLRDQESRGKNQILVDFTRATVKDLHSRILVAIQKIDFISKNIEDIRDKELQ 503

Query: 67  PQLVELIQ 74
           PQL ELI+
Sbjct: 504 PQLDELIR 511



>Os03g0321500 Protein of unknown function DUF630 domain containing protein
          Length = 843

 Score = 86.7 bits (213), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/73 (60%), Positives = 54/73 (73%)

Query: 1   ASEHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKI 60
           AS  + + YDEKC  LRHQ ++  +   ID+TRA VKDLHSR+ VAIQ +D ISK IE +
Sbjct: 537 ASGAICRQYDEKCRQLRHQESKAESQMSIDRTRATVKDLHSRIIVAIQRIDMISKNIEDL 596

Query: 61  RDEELQPQLVELI 73
           RD+ELQPQL ELI
Sbjct: 597 RDKELQPQLEELI 609



>Os02g0175200 
          Length = 315

 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 54/75 (72%)

Query: 1  ASEHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKI 60
          A E VR +Y+ KC LLR Q A G     I++TRA ++DL +++ ++I +VDA+SKRI  +
Sbjct: 7  AGERVRLSYERKCALLRSQDANGAEPSAIERTRAAMRDLRTKLDISITSVDAVSKRIAAV 66

Query: 61 RDEELQPQLVELIQG 75
          RD+EL PQL +LI+G
Sbjct: 67 RDDELLPQLAQLIRG 81



>Os09g0368900 Protein of unknown function DUF632 domain containing protein
          Length = 276

 Score = 68.2 bits (165), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/63 (53%), Positives = 47/63 (74%)

Query: 1  ASEHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKI 60
           +E ++K YD+KC  LRHQF R  +A+ +DKTR IVKDL+SR+ V  + + +ISK IEK+
Sbjct: 7  GTESLKKIYDKKCVQLRHQFERDASARQVDKTRVIVKDLYSRLKVETEVLYSISKIIEKL 66

Query: 61 RDE 63
          RDE
Sbjct: 67 RDE 69



>Os01g0960200 Protein of unknown function DUF630 domain containing protein
          Length = 834

 Score = 65.9 bits (159), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/75 (44%), Positives = 50/75 (66%)

Query: 3   EHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKIRD 62
           E +R  Y++K   L+    RGL++  ID TR  V++L SR+++ I+  +A S +I+ IRD
Sbjct: 504 EKLRILYEKKYRRLKSLDERGLDSTTIDATRLSVRNLQSRITINIRTANAFSSKIQNIRD 563

Query: 63  EELQPQLVELIQGYK 77
           EEL PQLV+LI G +
Sbjct: 564 EELYPQLVDLIIGLR 578



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.323    0.136    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,358,081
Number of extensions: 65739
Number of successful extensions: 270
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 270
Number of HSP's successfully gapped: 7
Length of query: 86
Length of database: 17,035,801
Length adjustment: 56
Effective length of query: 30
Effective length of database: 14,111,817
Effective search space: 423354510
Effective search space used: 423354510
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 149 (62.0 bits)