Os07g0686500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF630 domain containing protein.
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Os07g0686500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF630 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.01 | 0.399 | 11.1 | -3.19 | 0.121 | 1.67 | 0.74 | -1.38 | -0.342 | 1.19 | 20.41 | 1174 | -- | -- |
| 72.37 | 0.396 | 11.1 | -2.94 | 0.3 | 1.88 | 0.833 | -- | -0.305 | 2.51 | 15.9 | 2051 | -- | -- |
| 74.04 | 0.401 | 11.1 | -3.17 | 0.165 | 1.64 | -- | -1.13 | -0.348 | 24 | 20.33 | 1231 | -- | -- |
| 74.17 | 0.401 | 11.1 | -2.99 | 0.315 | 2.04 | -- | -- | -0.279 | 2.67 | 14.39 | 2042 | -- | -- |
| 74.8 | 0.403 | 11.1 | -3.12 | -- | 1.71 | -- | -1.03 | -0.323 | -- | 20.6 | 1141 | -- | -- |
| 144.66 | 0.564 | 11 | -2.27 | 0.399 | -- | 0.747 | -- | 0.115 | 0.825 | -- | -- | -- | -- |
| 147.01 | 0.568 | 11 | -2.29 | 0.397 | -- | -- | -- | 0.111 | 0.696 | -- | -- | -- | -- |
| 75.63 | 0.405 | 11.1 | -2.85 | -- | 1.68 | -- | -- | -0.247 | -- | 19.98 | 1133 | -- | -- |
| 265.46 | 0.759 | 11 | -- | 0.00294 | 0.943 | -- | -- | 0.235 | 13.9 | 21.8 | 1080 | -- | -- |
| 156.87 | 0.585 | 11 | -2.28 | -- | -- | -- | -- | 0.118 | -- | -- | -- | -- | -- |
| 285.55 | 0.79 | 10.9 | -- | 0.362 | -- | -- | -- | 0.366 | 0.399 | -- | -- | -- | -- |
| 264.8 | 0.758 | 10.9 | -- | -- | 0.893 | -- | -- | 0.302 | -- | 24.85 | 1116 | -- | -- |
| 293.81 | 0.8 | 10.9 | -- | -- | -- | -- | -- | 0.371 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.54 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 16 | 73.09 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 18 | 73.12 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 15 |
| 30 | 73.22 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 19 |
| 64 | 73.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 132 | 73.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 22 |
| 169 | 73.50 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 196 | 73.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 298 | 73.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 422 | 73.90 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 481 | 74.02 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 492 | 74.04 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 526 | 74.09 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 692 | 74.43 | temperature | 15 | 1440 | > th | dose dependent | sin | 1 | NA |
| 905 | 75.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 926 | 75.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 934 | 75.28 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 945 | 75.32 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 948 | 75.34 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 1 |